RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 DBPQ10586 325 aaPredicted RBP11.75□□□□□ -0.53
NUP88-201ENST00000225696 TMEM115Q12893 351 aaPredicted RBP11.75□□□□□ -0.53
NUP88-201ENST00000225696 HSPB3Q12988 150 aa11.75□□□□□ -0.53
NUP88-201ENST00000225696 GINS1Q14691 196 aa11.75□□□□□ -0.53
NUP88-201ENST00000225696 SYPL1Q16563 259 aa11.75□□□□□ -0.53
NUP88-201ENST00000225696 CEP78Q5JTW2 689 aa11.75□□□□□ -0.53
NUP88-201ENST00000225696 DDI2Q5TDH0 399 aa11.75□□□□□ -0.53
NUP88-201ENST00000225696 UNC5DQ6UXZ4 953 aa11.75□□□□□ -0.53
NUP88-201ENST00000225696 ZNF730Q6ZMV8 503 aa11.75□□□□□ -0.53
NUP88-201ENST00000225696 CLDN22Q8N7P3 220 aa11.75□□□□□ -0.53
NUP88-201ENST00000225696 GDPD1Q8N9F7 314 aa11.75□□□□□ -0.53
NUP88-201ENST00000225696 SNAPC3Q92966 411 aa11.75□□□□□ -0.53
NUP88-201ENST00000225696 ACAT2Q9BWD1 397 aa11.75□□□□□ -0.53
NUP88-201ENST00000225696 MIEF1Q9NQG6 463 aa11.75□□□□□ -0.53
NUP88-201ENST00000225696 GIMAP4Q9NUV9 329 aa11.75□□□□□ -0.53
NUP88-201ENST00000225696 PCDH10Q9P2E7 1040 aa11.75□□□□□ -0.53
NUP88-201ENST00000225696 ABT1Q9ULW3 272 aaKnown RBP11.75□□□□□ -0.53
NUP88-201ENST00000225696 PLAGL1Q9UM63 463 aa11.75□□□□□ -0.53
NUP88-201ENST00000225696 A4GNTQ9UNA3 340 aa11.75□□□□□ -0.53
NUP88-201ENST00000225696 DIMT1Q9UNQ2 313 aaKnown RBP11.75□□□□□ -0.53
NUP88-201ENST00000225696 MGAT4BQ9UQ53 548 aa11.75□□□□□ -0.53
NUP88-201ENST00000225696 THSD7BQ9C0I4 1608 aa11.75□□□□□ -0.53
NUP88-201ENST00000225696 C5orf58C9J3I9 102 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 FOXE1O00358 373 aaPredicted RBP11.74□□□□□ -0.53
NUP88-201ENST00000225696 HMGN4O00479 90 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 LEFTY1O75610 366 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 FAM157BP0CG42 384 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 UQCRC2P22695 453 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 SLC9A3P48764 834 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 P2RX3P56373 397 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 BNC1Q01954 994 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 TAP2Q03519 686 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 C1DQ13901 141 aaKnown RBP11.74□□□□□ -0.53
NUP88-201ENST00000225696 OCLNQ16625 522 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 LAMTOR1Q6IAA8 161 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 CNIH2Q6PI25 160 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.74□□□□□ -0.53
NUP88-201ENST00000225696 PRR23CQ6ZRP0 262 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 HTR3DQ70Z44 454 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 TRIM69Q86WT6 500 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 TMC8Q8IU68 726 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 KLHDC8AQ8IYD2 350 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 CFAP206Q8IYR0 622 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 Q8N402 240 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 ZNF366Q8N895 744 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 BMPERQ8N8U9 685 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 GALNT6Q8NCL4 622 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 OR5D16Q8NGK9 328 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 ENKURQ8TC29 256 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 KCTD7Q96MP8 289 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 NLNQ9BYT8 704 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 EGLN3Q9H6Z9 239 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 PPP1R3EQ9H7J1 279 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 MAN2C1Q9NTJ4 1040 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 ZSCAN32Q9NX65 697 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 MAPRE3Q9UPY8 281 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 INSL5Q9Y5Q6 135 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 SCN5AQ14524 2016 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 LOC102723532A0A0G2JNH3 316 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 FAAHO00519 579 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 TPD52L2O43399 206 aaKnown RBP11.74□□□□□ -0.53
NUP88-201ENST00000225696 ATG13O75143 517 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 RAB36O95755 333 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 EPPINO95925 133 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 EPHX1P07099 455 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 CTSLP07711 333 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 GIPRP48546 466 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 GZMKP49863 264 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 ARPC4P59998 168 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 EFNB1P98172 346 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 MAP4K2Q12851 820 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 GRIN2CQ14957 1233 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 QPRTQ15274 297 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 ARSIQ5FYB1 569 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 ZDHHC20Q5W0Z9 365 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 TMEM215Q68D42 235 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 B3GLCTQ6Y288 498 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 KIF18BQ86Y91 864 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 FAM26EQ8N5C1 309 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 DTX3Q8N9I9 347 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 ZFAND1Q8TCF1 268 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 GFM1Q96RP9 751 aaKnown RBP11.74□□□□□ -0.53
NUP88-201ENST00000225696 KCNK12Q9HB15 430 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 STARD7Q9NQZ5 370 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 FBXW2Q9UKT8 454 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 OBSL1O75147 1896 aa11.74□□□□□ -0.53
NUP88-201ENST00000225696 K7ESM1 405 aa11.73□□□□□ -0.53
NUP88-201ENST00000225696 MEN1O00255 615 aa11.73□□□□□ -0.53
NUP88-201ENST00000225696 PLPP1O14494 284 aa11.73□□□□□ -0.53
NUP88-201ENST00000225696 ZNF197O14709 1029 aa11.73□□□□□ -0.53
NUP88-201ENST00000225696 PLOD3O60568 738 aa11.73□□□□□ -0.53
NUP88-201ENST00000225696 NME6O75414 186 aaPredicted RBP11.73□□□□□ -0.53
NUP88-201ENST00000225696 SLC2A2P11168 524 aaPredicted RBP11.73□□□□□ -0.53
NUP88-201ENST00000225696 TIMP2P16035 220 aa11.73□□□□□ -0.53
NUP88-201ENST00000225696 VIPR1P32241 457 aa11.73□□□□□ -0.53
NUP88-201ENST00000225696 KCNJ5P48544 419 aa11.73□□□□□ -0.53
NUP88-201ENST00000225696 PRLHRP49683 370 aa11.73□□□□□ -0.53
NUP88-201ENST00000225696 METAP1P53582 386 aa11.73□□□□□ -0.53
NUP88-201ENST00000225696 CTBP2P56545 445 aa11.73□□□□□ -0.53
NUP88-201ENST00000225696 NOGQ13253 232 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms