RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 ZBTB44Q8NCP5 570 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 ADAMTS18Q8TE60 1221 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 SLC38A5Q8WUX1 472 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 LZICQ8WZA0 190 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 GATA6Q92908 595 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 COL26A1Q96A83 441 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 SMOC1Q9H4F8 434 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 SPTBP11277 2137 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 UPK1AO00322 258 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 FOXS1O43638 330 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 GPR75O95800 540 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 CER1O95813 267 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 HMGN2P05204 90 aaKnown RBP17.05■□□□□ 0.32
VIM-201ENST00000224237 TFPTP0C1Z6 253 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 SEPHS1P49903 392 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 CLCN2P51788 898 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 EMP3P54852 163 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 GRM7Q14831 915 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 LASP1Q14847 261 aaKnown RBP17.05■□□□□ 0.32
VIM-201ENST00000224237 LTB4RQ15722 352 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 OR4N5Q8IXE1 308 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 NUP43Q8NFH3 380 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 MIPOL1Q8TD10 442 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 RAB8BQ92930 207 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 TMBIM1Q969X1 311 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 TMEM19Q96HH6 336 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 CLK4Q9HAZ1 481 aaKnown RBP17.05■□□□□ 0.32
VIM-201ENST00000224237 ENAMQ9NRM1 1142 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 TMEM9Q9P0T7 183 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 TRPC4Q9UBN4 977 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 BAG5Q9UL15 447 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 AP4B1Q9Y6B7 739 aa17.05■□□□□ 0.32
VIM-201ENST00000224237 BLACEA4D250 179 aa17.04■□□□□ 0.32
VIM-201ENST00000224237 MAGEA13PA6NCF6 341 aa17.04■□□□□ 0.32
VIM-201ENST00000224237 M0QX08 132 aa17.04■□□□□ 0.32
VIM-201ENST00000224237 PLOD2O00469 737 aa17.04■□□□□ 0.32
VIM-201ENST00000224237 CHST10O43529 356 aa17.04■□□□□ 0.32
VIM-201ENST00000224237 SIGLEC6O43699 453 aa17.04■□□□□ 0.32
VIM-201ENST00000224237 FGF17O60258 216 aa17.04■□□□□ 0.32
VIM-201ENST00000224237 LDB3O75112 727 aa17.04■□□□□ 0.32
VIM-201ENST00000224237 MED26O95402 600 aa17.04■□□□□ 0.32
VIM-201ENST00000224237 ATP1B1P05026 303 aa17.04■□□□□ 0.32
VIM-201ENST00000224237 OR12D1P0DN82 309 aa17.04■□□□□ 0.32
VIM-201ENST00000224237 PPP2R1BP30154 601 aa17.04■□□□□ 0.32
VIM-201ENST00000224237 AVPR1BP47901 424 aa17.04■□□□□ 0.32
VIM-201ENST00000224237 TRIM61Q5EBN2 209 aa17.04■□□□□ 0.32
VIM-201ENST00000224237 SLC23A3Q6PIS1 610 aa17.04■□□□□ 0.32
VIM-201ENST00000224237 D2HGDHQ8N465 521 aa17.04■□□□□ 0.32
VIM-201ENST00000224237 TMEM52Q8NDY8 209 aa17.04■□□□□ 0.32
VIM-201ENST00000224237 OR5D16Q8NGK9 328 aa17.04■□□□□ 0.32
VIM-201ENST00000224237 TAMM41Q96BW9 452 aa17.04■□□□□ 0.32
VIM-201ENST00000224237 SDCCAG3Q96C92 435 aa17.04■□□□□ 0.32
VIM-201ENST00000224237 OSBPL11Q9BXB4 747 aa17.04■□□□□ 0.32
VIM-201ENST00000224237 DDX18Q9NVP1 670 aaKnown RBP17.04■□□□□ 0.32
VIM-201ENST00000224237 NTMQ9P121 344 aa17.04■□□□□ 0.32
VIM-201ENST00000224237 PTGFRNQ9P2B2 879 aa17.04■□□□□ 0.32
VIM-201ENST00000224237 SLC6A14Q9UN76 642 aa17.04■□□□□ 0.32
VIM-201ENST00000224237 UNC13CQ8NB66 2214 aa17.04■□□□□ 0.32
VIM-201ENST00000224237 C7orf72A4D263 438 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 FAM86C2PA6NEL3 165 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 A6NHS1 94 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 EI24O14681 340 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 DENRO43583 198 aaKnown RBP17.03■□□□□ 0.32
VIM-201ENST00000224237 PDE9AO76083 593 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 SLITRK5O94991 958 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 OPN1SWP03999 348 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 RNH1P13489 461 aaKnown RBP17.03■□□□□ 0.32
VIM-201ENST00000224237 KCNJ10P78508 379 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 KCNAB1Q14722 419 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 SNAP47Q5SQN1 464 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 PIWIL3Q7Z3Z3 882 aaKnown RBP17.03■□□□□ 0.32
VIM-201ENST00000224237 ZDHHC13Q8IUH4 622 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 SVOPLQ8N434 492 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 KAT2AQ92830 837 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 SLC41A2Q96JW4 573 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 CXorf56Q9H5V9 222 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 MRPS33Q9Y291 106 aaKnown RBP17.03■□□□□ 0.32
VIM-201ENST00000224237 PADI2Q9Y2J8 665 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 GPR179Q6PRD1 2367 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 LY6G6EA0A0G2JKS1 128 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 EME2A4GXA9 379 aaPredicted RBP17.03■□□□□ 0.32
VIM-201ENST00000224237 TMEM229AB2RXF0 380 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 FAM227AF5H4B4 570 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 H0YIG0 161 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 ARHGAP33O14559 1287 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 TOX3O15405 576 aaPredicted RBP17.03■□□□□ 0.32
VIM-201ENST00000224237 ASNA1O43681 348 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 SMNDC1O75940 238 aaKnown RBP eCLIP17.03■□□□□ 0.32
VIM-201ENST00000224237 BMP10O95393 424 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 PGM3O95394 542 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 MSL3P1P0C860 447 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 VLDLRP98155 873 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 SQSTM1Q13501 440 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 GNA13Q14344 377 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 GUSBP11Q6P575 273 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 SLC44A2Q8IWA5 706 aaPredicted RBP17.03■□□□□ 0.32
VIM-201ENST00000224237 LGI4Q8N135 537 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 XAGE5Q8WWM1 108 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 MS4A4EQ96PG1 132 aa17.03■□□□□ 0.32
VIM-201ENST00000224237 SPRTNQ9H040 489 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms