RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 UQCRC2P22695 453 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 GPC1P35052 558 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 VASPP50552 380 aaPredicted RBP12.44□□□□□ -0.42
CTNS-201ENST00000046640 UGT2B15P54855 530 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 PTGES3Q15185 160 aaKnown RBP12.44□□□□□ -0.42
CTNS-201ENST00000046640 SYPL1Q16563 259 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 ZNF630Q2M218 657 aaPredicted RBP12.44□□□□□ -0.42
CTNS-201ENST00000046640 COL21A1Q96P44 957 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 TEFMQ96QE5 360 aaKnown RBP12.44□□□□□ -0.42
CTNS-201ENST00000046640 MGLLQ99685 303 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 ZFR2Q9UPR6 939 aaKnown RBP12.44□□□□□ -0.42
CTNS-201ENST00000046640 IGKV1-8A0A0C4DH67 115 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 TRBV4-1A0A0J9YWV2 114 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 SAGE2PA6NJ88 616 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 TAF4O00268 1085 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 FFAR1O14842 300 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 CAPN5O15484 640 aaPredicted RBP12.44□□□□□ -0.42
CTNS-201ENST00000046640 DYRK3O43781 588 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 RECKO95980 971 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 APOA1P02647 267 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 OR12D1P0DN82 309 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 ARAFP10398 606 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 UGT2B10P36537 528 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 SSR2P43308 183 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 LBX1P52954 281 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 CDC20Q12834 499 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 REEP3Q6NUK4 255 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 ADAMTSL4Q6UY14 1074 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 UBE3DQ7Z6J8 389 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 MEX3DQ86XN8 651 aaKnown RBP12.44□□□□□ -0.42
CTNS-201ENST00000046640 KIAA1958Q8N8K9 716 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 OR4C15Q8NGM1 316 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 SMPDL3AQ92484 453 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 FCGR1BQ92637 280 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 EFHD2Q96C19 240 aaPredicted RBP12.44□□□□□ -0.42
CTNS-201ENST00000046640 TXNDC15Q96J42 360 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 PIP5K1AQ99755 562 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 MENTQ9BUN1 341 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 HDAC8Q9BY41 377 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 GABARAPL3Q9BY60 117 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 NDEL1Q9GZM8 345 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 MKRN2Q9H000 416 aaKnown RBP12.44□□□□□ -0.42
CTNS-201ENST00000046640 SNTG1Q9NSN8 517 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 DNAJC27Q9NZQ0 273 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 CLEC2DQ9UHP7 191 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 CA5BQ9Y2D0 317 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 ISPDA4D126 451 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 NDUFS4O43181 175 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 IFNW1P05000 195 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 CNR2P34972 360 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 SOX6P35712 828 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 RPL3P39023 403 aaKnown RBP12.44□□□□□ -0.42
CTNS-201ENST00000046640 OR2B6P58173 313 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 RACK1P63244 317 aaKnown RBP12.44□□□□□ -0.42
CTNS-201ENST00000046640 HEPACAMQ14CZ8 416 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 FAM46CQ5VWP2 391 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 PARM1Q6UWI2 310 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 LINC00299Q6ZSB3 139 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 NRARPQ7Z6K4 114 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 LACC1Q8IV20 430 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 TMEM145Q8NBT3 493 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 OR8K5Q8NH50 307 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 GEMIN6Q8WXD5 167 aaKnown RBP12.44□□□□□ -0.42
CTNS-201ENST00000046640 FGF14Q92915 247 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 FCRL4Q96PJ5 515 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 BEX2Q9BXY8 128 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 TMEM38AQ9H6F2 299 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 TIGARQ9NQ88 270 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 RWDD3Q9Y3V2 267 aa12.44□□□□□ -0.42
CTNS-201ENST00000046640 SCN3AQ9NY46 2000 aa12.43□□□□□ -0.42
CTNS-201ENST00000046640 FAM47E-STBD1D6RA91 191 aa12.43□□□□□ -0.42
CTNS-201ENST00000046640 ARHGAP33O14559 1287 aa12.43□□□□□ -0.42
CTNS-201ENST00000046640 NARSO43776 548 aaKnown RBP12.43□□□□□ -0.42
CTNS-201ENST00000046640 SEMA7AO75326 666 aa12.43□□□□□ -0.42
CTNS-201ENST00000046640 CD72P21854 359 aa12.43□□□□□ -0.42
CTNS-201ENST00000046640 XCR1P46094 333 aa12.43□□□□□ -0.42
CTNS-201ENST00000046640 CCT3P49368 545 aaKnown RBP12.43□□□□□ -0.42
CTNS-201ENST00000046640 RAB8AP61006 207 aa12.43□□□□□ -0.42
CTNS-201ENST00000046640 CSNK1G2P78368 415 aa12.43□□□□□ -0.42
CTNS-201ENST00000046640 LSM11P83369 360 aaKnown RBP eCLIP12.43□□□□□ -0.42
CTNS-201ENST00000046640 RBBP4Q09028 425 aa12.43□□□□□ -0.42
CTNS-201ENST00000046640 SGCGQ13326 291 aa12.43□□□□□ -0.42
CTNS-201ENST00000046640 TMEM31Q5JXX7 168 aa12.43□□□□□ -0.42
CTNS-201ENST00000046640 SLC34A3Q8N130 599 aa12.43□□□□□ -0.42
CTNS-201ENST00000046640 PHOSPHO2Q8TCD6 241 aa12.43□□□□□ -0.42
CTNS-201ENST00000046640 TMEM203Q969S6 136 aa12.43□□□□□ -0.42
CTNS-201ENST00000046640 DPH7Q9BTV6 452 aa12.43□□□□□ -0.42
CTNS-201ENST00000046640 FBXL12Q9NXK8 326 aa12.43□□□□□ -0.42
CTNS-201ENST00000046640 KLHL3Q9UH77 587 aa12.43□□□□□ -0.42
CTNS-201ENST00000046640 FBXW2Q9UKT8 454 aa12.43□□□□□ -0.42
CTNS-201ENST00000046640 YBX2Q9Y2T7 364 aaKnown RBP12.43□□□□□ -0.42
CTNS-201ENST00000046640 KIAA1549LQ6ZVL6 1849 aa12.43□□□□□ -0.42
CTNS-201ENST00000046640 C2orf16Q68DN1 1984 aa12.43□□□□□ -0.42
CTNS-201ENST00000046640 ANHXE9PGG2 379 aa12.43□□□□□ -0.42
CTNS-201ENST00000046640 SLC28A2O43868 658 aa12.43□□□□□ -0.42
CTNS-201ENST00000046640 GPX5O75715 221 aa12.43□□□□□ -0.42
CTNS-201ENST00000046640 CCNB2O95067 398 aa12.43□□□□□ -0.42
CTNS-201ENST00000046640 MRPS15P82914 257 aaKnown RBP12.43□□□□□ -0.42
CTNS-201ENST00000046640 ZNF45Q02386 682 aa12.43□□□□□ -0.42
CTNS-201ENST00000046640 IRF3Q14653 427 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms