RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 SPTBN2O15020 2390 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 ARID1AO14497 2285 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 TEX13CA0A0J9YWL9 993 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 C5orf51A6NDU8 294 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 RLN2P04090 185 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 MLLT1Q03111 559 aaPredicted RBP11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 PCBP2Q15366 365 aaKnown RBP eCLIP11.59□□□□□ -0.551e-6■■■■□ 26
TSPAN9-201ENST00000011898 NCEH1Q6PIU2 408 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 C3P1Q6ZMU1 363 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 VTCN1Q7Z7D3 282 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 OR7G2Q8NG99 324 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 CCM2Q9BSQ5 444 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 MTG2Q9H4K7 406 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 IL26Q9NPH9 171 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 PRDM9Q9NQV7 894 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 SLC27A6Q9Y2P4 619 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 ZNF195O14628 629 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 C6orf47O95873 294 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 ATXN1LP0C7T5 689 aaKnown RBP11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 ZNF30P17039 623 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 BPIP17213 487 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 PTPN6P29350 595 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 DCTP40126 519 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 TGM4P49221 684 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 GPR85P60893 370 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 RGS1Q08116 209 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 EXOC3L2Q2M3D2 409 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 CYP27C1Q4G0S4 372 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 CORO6Q6QEF8 472 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 TMIGD1Q6UXZ0 262 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 CHRDL2Q6WN34 429 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 ZNF783Q6ZMS7 281 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 TMED4Q7Z7H5 227 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 AQP11Q8NBQ7 271 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 OVCA2Q8WZ82 227 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 IGSF21Q96ID5 467 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 TGIF2Q9GZN2 237 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 DLGAP4Q9Y2H0 992 aa11.59□□□□□ -0.55
TSPAN9-201ENST00000011898 TRBV23OR9-2A0A075B6M9 112 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 LOC102723532A0A0G2JNH3 316 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 OR6C65A6NJZ3 312 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 SOBPA7XYQ1 873 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 POP7O75817 140 aaKnown RBP11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 IFNA6P05013 189 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 CD6P30203 668 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 PSMD8P48556 350 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 MNX1P50219 401 aaPredicted RBP11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 LMAN2Q12907 356 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 KLHL26Q53HC5 615 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 MTFR2Q6P444 385 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 FUNDC1Q8IVP5 155 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 NR4A3Q92570 626 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 RIPOR3Q96MK2 946 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 TBX5Q99593 518 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 CARS2Q9HA77 564 aaKnown RBP11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 RHCGQ9UBD6 479 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 TBC1D3DA0A087WVF3 549 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 TBC1D3IA0A087WXS9 549 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 TBC1D3EA0A087X179 549 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 TBC1D3KA0A087X1G2 549 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 TBC1D3FA6NER0 549 aaPredicted RBP11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 DRGXA6NNA5 263 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 TBC1D3LB9A6J9 549 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 UBFD1O14562 309 aaKnown RBP11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 PAK4O96013 591 aaPredicted RBP11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 PCCBP05166 539 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 BCHEP06276 602 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 SRPRAP08240 638 aaKnown RBP11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 TBC1D3HP0C7X1 549 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 LAMP2P13473 410 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 ARNTP27540 789 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 VIPR1P32241 457 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 RPL4P36578 427 aaKnown RBP11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 DPP6P42658 865 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 XKP51811 444 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 VSX2P58304 361 aaPredicted RBP11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 RAB8AP61006 207 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 SNTB2Q13425 540 aaKnown RBP11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 CAMK2BQ13554 666 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 CLLU1OSQ5K130 101 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 PRAMEF14Q5SWL7 426 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 PRAMEF13Q5VWM6 474 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 TBC1D3GQ6DHY5 549 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 TBC1D3CQ6IPX1 549 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 PRSS48Q7RTY5 328 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 TBC1D3Q8IZP1 549 aaPredicted RBP11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 OR10G6Q8NH81 332 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 MOSPD2Q8NHP6 518 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 FANK1Q8TC84 345 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 BADQ92934 168 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 DUS2Q9NX74 493 aaKnown RBP11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 CFAP20Q9Y6A4 193 aaKnown RBP11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 URADA6NGE7 173 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 OR10H2O60403 315 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 SOX14O95416 240 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 HLA-DPB1P04440 258 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 H2AFB2P0C5Z0 115 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 SAGP10523 405 aaPredicted RBP11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 IDSP22304 550 aa11.58□□□□□ -0.56
TSPAN9-201ENST00000011898 ALAS2P22557 587 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms