RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 PRLHRP49683 370 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 ASAH1Q13510 395 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 MPP7Q5T2T1 576 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 MEDAGQ5VYS4 303 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 LHX8Q68G74 356 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 TYW3Q6IPR3 259 aaKnown RBP13.29□□□□□ -0.28
USH1C-201ENST00000005226 METTL3Q86U44 580 aaKnown RBP13.29□□□□□ -0.28
USH1C-201ENST00000005226 LHFPL3Q86UP9 236 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 IQCHQ86VS3 1027 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 VWA5B2Q8N398 1253 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 YIPF7Q8N8F6 280 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 AMER3Q8N944 861 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 ZNF582Q96NG8 517 aaPredicted RBP13.29□□□□□ -0.28
USH1C-201ENST00000005226 KATNB1Q9BVA0 655 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 SERHL2Q9H4I8 314 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 HCFC1R1Q9NWW0 138 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 SEC14L3Q9UDX4 400 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 FEZF1A0PJY2 475 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 SLC35F4A4IF30 521 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 HMGN4O00479 90 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 POLR1CO15160 346 aaPredicted RBP13.29□□□□□ -0.28
USH1C-201ENST00000005226 ALPPL2P10696 532 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 CYP2A6P11509 494 aaPredicted RBP13.29□□□□□ -0.28
USH1C-201ENST00000005226 PSKH1P11801 424 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 PTNP21246 168 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 GPLD1P80108 840 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 MLLT1Q03111 559 aaPredicted RBP13.29□□□□□ -0.28
USH1C-201ENST00000005226 SNAPC1Q16533 368 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 TMEM201Q5SNT2 666 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 XKRXQ6PP77 449 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 B3GLCTQ6Y288 498 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 GDPGP1Q6ZNW5 385 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 RDH10Q8IZV5 341 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 CITED4Q96RK1 184 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 EFCAB11Q9BUY7 163 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 THSD7BQ9C0I4 1608 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 PLPP1O14494 284 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 PPM1DO15297 605 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 HPGDSO60760 199 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 TBX6O95947 436 aaPredicted RBP13.28□□□□□ -0.28
USH1C-201ENST00000005226 CHRNB1P11230 501 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 FABP5Q01469 135 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 YIF1BQ5BJH7 314 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 C11orf96Q7Z7L8 435 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 ADIPOR2Q86V24 386 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 LAPTM4BQ86VI4 370 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 TCEAL8Q8IYN2 117 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 VN1R2Q8NFZ6 395 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 ENKURQ8TC29 256 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 SLC9A6Q92581 669 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 ZSCAN5AQ9BUG6 496 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 TRPC4Q9UBN4 977 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 A4GNTQ9UNA3 340 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 PCYT1BQ9Y5K3 369 aaPredicted RBP13.28□□□□□ -0.28
USH1C-201ENST00000005226 A0A0G2JMP0 313 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 FAAHO00519 579 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 DVL2O14641 736 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 YES1P07947 543 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 POLR2EP19388 210 aaKnown RBP13.28□□□□□ -0.28
USH1C-201ENST00000005226 CCR2P41597 374 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 GIPRP48546 466 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 PRKAG1P54619 331 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 UBE3AQ05086 875 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 EFR3AQ14156 821 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 CLPPQ16740 277 aaPredicted RBP13.28□□□□□ -0.28
USH1C-201ENST00000005226 OR7G1Q8NGA0 311 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 OR4K5Q8NGD3 323 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 OR9A1PQ8NGU1 263 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 MSLNLQ96KJ4 702 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 GFM1Q96RP9 751 aaKnown RBP13.28□□□□□ -0.28
USH1C-201ENST00000005226 HDHD5Q9BXW7 423 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 QRSL1Q9H0R6 528 aaKnown RBP13.28□□□□□ -0.28
USH1C-201ENST00000005226 IRF2BPLQ9H1B7 796 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 NLKQ9UBE8 527 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 KIAA1671Q9BY89 1806 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 MYO7AQ13402 2215 aa13.28□□□□□ -0.28
USH1C-201ENST00000005226 A0A0X1KG70 313 aa13.27□□□□□ -0.28
USH1C-201ENST00000005226 ARRDC5A6NEK1 342 aa13.27□□□□□ -0.28
USH1C-201ENST00000005226 PRKRAO75569 313 aaKnown RBP13.27□□□□□ -0.28
USH1C-201ENST00000005226 ALX3O95076 343 aa13.27□□□□□ -0.28
USH1C-201ENST00000005226 RAB36O95755 333 aa13.27□□□□□ -0.28
USH1C-201ENST00000005226 CH25HO95992 272 aa13.27□□□□□ -0.28
USH1C-201ENST00000005226 LALBAP00709 142 aa13.27□□□□□ -0.28
USH1C-201ENST00000005226 ELFN1P0C7U0 828 aa13.27□□□□□ -0.28
USH1C-201ENST00000005226 ZNF30P17039 623 aa13.27□□□□□ -0.28
USH1C-201ENST00000005226 RPS5P46782 204 aaKnown RBP13.27□□□□□ -0.28
USH1C-201ENST00000005226 KCNJ5P48544 419 aa13.27□□□□□ -0.28
USH1C-201ENST00000005226 MAPK12P53778 367 aa13.27□□□□□ -0.28
USH1C-201ENST00000005226 PCDH1Q08174 1060 aa13.27□□□□□ -0.28
USH1C-201ENST00000005226 QPRTQ15274 297 aa13.27□□□□□ -0.28
USH1C-201ENST00000005226 TATDN3Q17R31 274 aa13.27□□□□□ -0.28
USH1C-201ENST00000005226 CLEC12AQ5QGZ9 265 aa13.27□□□□□ -0.28
USH1C-201ENST00000005226 UNC5DQ6UXZ4 953 aa13.27□□□□□ -0.28
USH1C-201ENST00000005226 SLC9B2Q86UD5 537 aa13.27□□□□□ -0.28
USH1C-201ENST00000005226 ZNF557Q8N988 423 aaPredicted RBP13.27□□□□□ -0.28
USH1C-201ENST00000005226 SIMC1Q8NDZ2 872 aa13.27□□□□□ -0.28
USH1C-201ENST00000005226 JPH3Q8WXH2 748 aaPredicted RBP13.27□□□□□ -0.28
USH1C-201ENST00000005226 TM4SF18Q96CE8 201 aa13.27□□□□□ -0.28
USH1C-201ENST00000005226 NEURL3Q96EH8 262 aa13.27□□□□□ -0.28
USH1C-201ENST00000005226 ZBED6CLQ96FA7 236 aaPredicted RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms