RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Tbx1P70323 479 aa14.31□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Rps3aP97351 264 aaKnown RBP14.31□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Hp1bp3Q3TEA8 554 aaKnown RBP14.31□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 VclQ64727 1066 aaKnown RBP14.31□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Rapgefl1Q68EF8 662 aa14.31□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Enkd1Q7TSV9 346 aa14.31□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Ddx52Q8K301 598 aaKnown RBP14.31□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 As3mtQ91WU5 376 aa14.31□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Fbxl12Q9EPX5 326 aa14.31□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Arpc3Q9JM76 178 aaKnown RBP14.31□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Khdrbs2Q9WU01 349 aa14.31□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Eif4hQ9WUK2 248 aaKnown RBP14.31□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 PtprsB0V2N1 1907 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Gm33543A0A1B0GSI5 81 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Ikzf3O08900 507 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Kif1cO35071 1100 aaKnown RBP14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Pbx2O35984 430 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Kcnk9Q3LS21 402 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Pan3Q640Q5 837 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Atp11bQ6DFW5 1175 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Trim46Q7TNM2 759 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Znf322Q8BZ89 410 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Pdlim5Q8CI51 591 aaKnown RBP14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Uhrf1Q8VDF2 782 aaKnown RBP14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Olfr599Q8VG01 315 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Q9CPZ3 230 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Cmtm8Q9CZR4 173 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Tmigd1Q9D7L8 261 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Socs6Q9JLY0 533 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 D3Ertd254eA0A0G2JEM5 796 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Gm13420A0A140LJJ2 248 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Pramef25A2ASI9 494 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Zfp809G3X9G7 402 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Mtnd2P03893 345 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Rpl6P47911 296 aaKnown RBP14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Hnrnpa1P49312 320 aaKnown RBP14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Drd2P61168 444 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Itgb2lQ3UV74 738 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Frem3Q5H8B9 2123 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Szrd1Q6NXN1 152 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Krr1Q8BGA5 380 aaKnown RBP14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 AntxrlQ8BVM2 641 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Zhx3Q8C0Q2 951 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Dppa4Q8CCG4 296 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 NotumQ8R116 503 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Ranbp3Q9CT10 491 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Smurf1Q9CUN6 731 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Trmt5Q9D0C4 501 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Adam26aQ9R158 697 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Rgs6Q9Z2H2 472 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Il17dA0A0B4J1G4 205 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Zfp969A2ART2 485 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Gm8765B7ZWJ3 1017 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 GmlE9PX31 176 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Olfr1249L7MU51 318 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 P18533 117 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Ccr3P51678 359 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Gm906Q3V0M1 1017 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Nr1d2Q60674 576 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Osgepl1Q6PEB4 414 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 PstkQ8BP74 359 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Gulp1Q8K2A1 304 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Fndc5Q8K4Z2 209 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Noxo1Q8VCM2 349 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 MrgprhQ99MT8 321 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Nusap1Q9ERH4 427 aaKnown RBP14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Kcnd3Q9Z0V1 655 aa14.3□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Cacna1dQ99246 2179 aa14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Fam217bA2AJW5 387 aa14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Slc27a6E9Q9W4 619 aa14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Dcpp3L7N259 170 aa14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 ItgamP05555 1153 aa14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Id2P41136 134 aa14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Rpl10lP86048 214 aaKnown RBP14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 TepsinQ3U3N6 573 aa14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Taar7fQ5QD08 358 aa14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Rbm34Q8C5L7 375 aaKnown RBP14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Samd7Q8C8Y5 445 aa14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Dcun1d3Q8K0V2 304 aa14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 C1qtnf12Q8R2Z0 308 aa14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Chchd6Q91VN4 273 aa14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Rab28Q99KL7 221 aa14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Tmem53Q9D0Z3 276 aa14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Tmed11Q9D2R4 215 aa14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 4933421I07RikQ9D420 214 aa14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Med27Q9DB40 311 aa14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Vmn1r52Q9EP79 309 aa14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Slco2a1Q9EPT5 643 aa14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 SrrQ9QZX7 339 aa14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Rad9aQ9Z0F6 389 aa14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Igkv10-95A0A0G2JFY3 115 aa14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Rdh5O55240 318 aa14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Ppm1bP36993 390 aa14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Q8R3C1 574 aa14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Zdhhc5Q8VDZ4 715 aa14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Tmem159Q922Z1 161 aa14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 PrelpQ9JK53 378 aa14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Uba2Q9Z1F9 638 aa14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Gm17190V9GX38 357 aa14.29□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Slc22a28B2RT89 552 aa14.28□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 112.6 ms