RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-238ENST00000641523 SWI5Q1ZZU3 235 aa9.37□□□□□ -0.91
CASC19-238ENST00000641523 FOXD4L5Q5VV16 416 aaPredicted RBP9.37□□□□□ -0.91
CASC19-238ENST00000641523 PPP1R18Q6NYC8 613 aa9.37□□□□□ -0.91
CASC19-238ENST00000641523 VASH1Q7L8A9 365 aaPredicted RBP9.37□□□□□ -0.91
CASC19-238ENST00000641523 CCER1Q8TC90 406 aaPredicted RBP9.37□□□□□ -0.91
CASC19-238ENST00000641523 FOXD4L4Q8WXT5 416 aaPredicted RBP9.37□□□□□ -0.91
CASC19-238ENST00000641523 RRP7BPQ9NSQ0 103 aa9.37□□□□□ -0.91
CASC19-238ENST00000641523 SPATA31D1Q6ZQQ2 1576 aa9.36□□□□□ -0.91
CASC19-238ENST00000641523 ERVK-7P63135 1459 aa9.36□□□□□ -0.91
CASC19-238ENST00000641523 LTBP4Q8N2S1 1624 aa9.36□□□□□ -0.91
CASC19-238ENST00000641523 WNT7BP56706 349 aa9.36□□□□□ -0.91
CASC19-238ENST00000641523 INTS6LQ5JSJ4 861 aaKnown RBP9.36□□□□□ -0.91
CASC19-238ENST00000641523 RNF166Q96A37 237 aaPredicted RBP9.36□□□□□ -0.91
CASC19-238ENST00000641523 SIRT1Q96EB6 747 aa9.36□□□□□ -0.91
CASC19-238ENST00000641523 PRIMPOLQ96LW4 560 aa9.36□□□□□ -0.91
CASC19-238ENST00000641523 RBM19Q9Y4C8 960 aaKnown RBP9.36□□□□□ -0.91
CASC19-238ENST00000641523 MROH1Q8NDA8 1641 aa9.36□□□□□ -0.91
CASC19-238ENST00000641523 ERVH48-1M5A8F1 160 aa9.35□□□□□ -0.91
CASC19-238ENST00000641523 PRMT3O60678 531 aa9.35□□□□□ -0.91
CASC19-238ENST00000641523 ARID4AP29374 1257 aaPredicted RBP9.35□□□□□ -0.91
CASC19-238ENST00000641523 ARID5BQ14865 1188 aa9.35□□□□□ -0.91
CASC19-238ENST00000641523 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.35□□□□□ -0.91
CASC19-238ENST00000641523 SCTRP47872 440 aa9.34□□□□□ -0.91
CASC19-238ENST00000641523 FAM50AQ14320 339 aaKnown RBP9.34□□□□□ -0.91
CASC19-238ENST00000641523 CCDC27Q2M243 656 aa9.34□□□□□ -0.91
CASC19-238ENST00000641523 ADGRL2O95490 1459 aa9.34□□□□□ -0.91
CASC19-238ENST00000641523 ZNF335Q9H4Z2 1342 aaPredicted RBP9.34□□□□□ -0.91
CASC19-238ENST00000641523 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.34□□□□□ -0.91
CASC19-238ENST00000641523 RPIAP49247 311 aa9.33□□□□□ -0.92
CASC19-238ENST00000641523 CCDC125Q86Z20 511 aa9.33□□□□□ -0.92
CASC19-238ENST00000641523 EHBP1Q8NDI1 1231 aa9.33□□□□□ -0.92
CASC19-238ENST00000641523 MAP4K5Q9Y4K4 846 aa9.33□□□□□ -0.92
CASC19-238ENST00000641523 DEPDC5O75140 1603 aa9.33□□□□□ -0.92
CASC19-238ENST00000641523 POLR1AO95602 1720 aaPredicted RBP9.33□□□□□ -0.92
CASC19-238ENST00000641523 MED14O60244 1454 aa9.33□□□□□ -0.92
CASC19-238ENST00000641523 CPS1P31327 1500 aa9.33□□□□□ -0.92
CASC19-238ENST00000641523 LMTK2Q8IWU2 1503 aa9.33□□□□□ -0.92
CASC19-238ENST00000641523 MYCP01106 439 aaPredicted RBP9.33□□□□□ -0.92
CASC19-238ENST00000641523 RC3H1Q5TC82 1133 aaKnown RBP9.33□□□□□ -0.92
CASC19-238ENST00000641523 NPHP4O75161 1426 aaPredicted RBP9.32□□□□□ -0.92
CASC19-238ENST00000641523 HINFPQ9BQA5 517 aa9.32□□□□□ -0.92
CASC19-238ENST00000641523 CD2BP2O95400 341 aaKnown RBP9.31□□□□□ -0.92
CASC19-238ENST00000641523 SERPINB4P48594 390 aa9.31□□□□□ -0.92
CASC19-238ENST00000641523 LIAT1Q6ZQX7 453 aa9.31□□□□□ -0.92
CASC19-238ENST00000641523 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.31□□□□□ -0.92
CASC19-238ENST00000641523 TMPRSS4Q9NRS4 437 aa9.31□□□□□ -0.92
CASC19-238ENST00000641523 ANKRD50Q9ULJ7 1429 aa9.31□□□□□ -0.92
CASC19-238ENST00000641523 NEURL4Q96JN8 1562 aa9.31□□□□□ -0.92
CASC19-238ENST00000641523 CEP152O94986 1710 aa9.3□□□□□ -0.92
CASC19-238ENST00000641523 OCLNQ16625 522 aa9.3□□□□□ -0.92
CASC19-238ENST00000641523 SPNS2Q8IVW8 549 aa9.3□□□□□ -0.92
CASC19-238ENST00000641523 EID1Q9Y6B2 187 aa9.3□□□□□ -0.92
CASC19-238ENST00000641523 ROCK1Q13464 1354 aa9.3□□□□□ -0.92
CASC19-238ENST00000641523 UBAP1LF5GYI3 381 aa9.29□□□□□ -0.92
CASC19-238ENST00000641523 FSHRP23945 695 aa9.29□□□□□ -0.92
CASC19-238ENST00000641523 GRM5P41594 1212 aa9.29□□□□□ -0.92
CASC19-238ENST00000641523 TSEN2Q8NCE0 465 aaKnown RBP9.29□□□□□ -0.92
CASC19-238ENST00000641523 EMID1Q96A84 441 aaPredicted RBP9.29□□□□□ -0.92
CASC19-238ENST00000641523 CDK15Q96Q40 435 aa9.29□□□□□ -0.92
CASC19-238ENST00000641523 CYLDQ9NQC7 956 aa9.29□□□□□ -0.92
CASC19-238ENST00000641523 CXXC1Q9P0U4 656 aaPredicted RBP9.29□□□□□ -0.92
CASC19-238ENST00000641523 TLL2Q9Y6L7 1015 aa9.29□□□□□ -0.92
CASC19-238ENST00000641523 RPRD2Q5VT52 1461 aaKnown RBP9.29□□□□□ -0.92
CASC19-238ENST00000641523 SCAF11Q99590 1463 aaKnown RBP9.29□□□□□ -0.92
CASC19-238ENST00000641523 VWDEQ8N2E2 1590 aa9.29□□□□□ -0.92
CASC19-238ENST00000641523 STAU1O95793 577 aaKnown RBP9.29□□□□□ -0.92
CASC19-238ENST00000641523 GAS2L2Q8NHY3 880 aa9.29□□□□□ -0.92
CASC19-238ENST00000641523 C1orf216Q8TAB5 229 aa9.29□□□□□ -0.92
CASC19-238ENST00000641523 SLIT1O75093 1534 aa9.28□□□□□ -0.92
CASC19-238ENST00000641523 EFCAB6Q5THR3 1501 aa9.28□□□□□ -0.92
CASC19-238ENST00000641523 TOM1O60784 492 aa9.28□□□□□ -0.92
CASC19-238ENST00000641523 ERVK-9P63128 1117 aa9.28□□□□□ -0.92
CASC19-238ENST00000641523 CC2D2BQ6DHV5 1058 aa9.28□□□□□ -0.92
CASC19-238ENST00000641523 TAS1R3Q7RTX0 852 aa9.28□□□□□ -0.92
CASC19-238ENST00000641523 ZNF428Q96B54 188 aa9.28□□□□□ -0.92
CASC19-238ENST00000641523 ZNF358Q9NW07 568 aa9.28□□□□□ -0.92
CASC19-238ENST00000641523 SLC52A1Q9NWF4 448 aa9.28□□□□□ -0.92
CASC19-238ENST00000641523 IQGAP1P46940 1657 aa9.27□□□□□ -0.92
CASC19-238ENST00000641523 ARHGAP23Q9P227 1491 aa9.27□□□□□ -0.93
CASC19-238ENST00000641523 SOWAHDA6NJG2 315 aa9.27□□□□□ -0.93
CASC19-238ENST00000641523 OSBPL3Q9H4L5 887 aa9.27□□□□□ -0.93
CASC19-238ENST00000641523 NOS1P29475 1434 aa9.26□□□□□ -0.93
CASC19-238ENST00000641523 TMEM2Q9UHN6 1383 aa9.26□□□□□ -0.93
CASC19-238ENST00000641523 UBR1Q8IWV7 1749 aa9.26□□□□□ -0.93
CASC19-238ENST00000641523 KDM5AP29375 1690 aaKnown RBP9.26□□□□□ -0.93
CASC19-238ENST00000641523 TMEM229AB2RXF0 380 aa9.26□□□□□ -0.93
CASC19-238ENST00000641523 SIAH2O43255 324 aa9.26□□□□□ -0.93
CASC19-238ENST00000641523 M0R2N6 131 aa9.24□□□□□ -0.93
CASC19-238ENST00000641523 IGSF3O75054 1194 aa9.24□□□□□ -0.93
CASC19-238ENST00000641523 WEE1P30291 646 aa9.24□□□□□ -0.93
CASC19-238ENST00000641523 ZNF784Q8NCA9 323 aaPredicted RBP9.24□□□□□ -0.93
CASC19-238ENST00000641523 PURBQ96QR8 312 aaKnown RBP9.24□□□□□ -0.93
CASC19-238ENST00000641523 MKNK1Q9BUB5 465 aa9.24□□□□□ -0.93
CASC19-238ENST00000641523 CFAP65Q6ZU64 1925 aaKnown RBP9.24□□□□□ -0.93
CASC19-238ENST00000641523 SYNMO15061 1565 aa9.24□□□□□ -0.93
CASC19-238ENST00000641523 ABL1P00519 1130 aa9.24□□□□□ -0.93
CASC19-238ENST00000641523 RBM25P49756 843 aaKnown RBP9.24□□□□□ -0.93
CASC19-238ENST00000641523 SCNN1DP51172 638 aa9.24□□□□□ -0.93
CASC19-238ENST00000641523 DHX9Q08211 1270 aaKnown RBP9.24□□□□□ -0.93
CASC19-238ENST00000641523 IDI1Q13907 227 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms