RNA–Protein interactions for RNA: ENST00000640958.1

SP3-208, Transcript of Sp3 transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP3, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-208ENST00000640958 PIP4K2AP48426 406 aaPredicted RBP25.04■■□□□ 1.6
SP3-208ENST00000640958 NEXNQ0ZGT2 675 aa25.04■■□□□ 1.6
SP3-208ENST00000640958 TNS2Q63HR2 1409 aa25.04■■□□□ 1.6
SP3-208ENST00000640958 MYD88Q99836 296 aa25.04■■□□□ 1.6
SP3-208ENST00000640958 ERBB4Q15303 1308 aa25.03■■□□□ 1.6
SP3-208ENST00000640958 ANKRD13DQ6ZTN6 518 aa25.03■■□□□ 1.6
SP3-208ENST00000640958 GCKRQ14397 625 aa25.03■■□□□ 1.6
SP3-208ENST00000640958 PI4K2BQ8TCG2 481 aa25.03■■□□□ 1.6
SP3-208ENST00000640958 BICC1Q9H694 974 aaKnown RBP25.03■■□□□ 1.6
SP3-208ENST00000640958 NUP188Q5SRE5 1749 aa25.03■■□□□ 1.6
SP3-208ENST00000640958 COL16A1Q07092 1604 aaPredicted RBP25.02■■□□□ 1.6
SP3-208ENST00000640958 UNC5CLQ8IV45 518 aa25.02■■□□□ 1.6
SP3-208ENST00000640958 USP42Q9H9J4 1324 aaKnown RBP25.02■■□□□ 1.6
SP3-208ENST00000640958 RABEP1Q15276 862 aa25.01■■□□□ 1.59
SP3-208ENST00000640958 DDX54Q8TDD1 881 aaKnown RBP25.01■■□□□ 1.59
SP3-208ENST00000640958 ESYT1Q9BSJ8 1104 aa25.01■■□□□ 1.59
SP3-208ENST00000640958 TRIM6-TRIM34B2RNG4 842 aa25.01■■□□□ 1.59
SP3-208ENST00000640958 CHMLP26374 656 aa25■■□□□ 1.59
SP3-208ENST00000640958 DDIT3P35638 169 aa25■■□□□ 1.59
SP3-208ENST00000640958 RILPL2Q969X0 211 aa25■■□□□ 1.59
SP3-208ENST00000640958 CHMP5Q9NZZ3 219 aa25■■□□□ 1.59
SP3-208ENST00000640958 PA2G4Q9UQ80 394 aaKnown RBP25■■□□□ 1.59
SP3-208ENST00000640958 PLCH1Q4KWH8 1693 aa25■■□□□ 1.59
SP3-208ENST00000640958 OS9Q13438 667 aaPredicted RBP25■■□□□ 1.59
SP3-208ENST00000640958 K7ELQ4 463 aaPredicted RBP24.99■■□□□ 1.59
SP3-208ENST00000640958 NBPF26B4DH59 902 aa24.98■■□□□ 1.59
SP3-208ENST00000640958 NBPF14Q5TI25 921 aa24.98■■□□□ 1.59
SP3-208ENST00000640958 NBPF10Q6P3W6 841 aaKnown RBP24.98■■□□□ 1.59
SP3-208ENST00000640958 ERC1Q8IUD2 1116 aa24.98■■□□□ 1.59
SP3-208ENST00000640958 NBPF15Q8N660 670 aa24.98■■□□□ 1.59
SP3-208ENST00000640958 BTG4Q9NY30 223 aa24.98■■□□□ 1.59
SP3-208ENST00000640958 DISP2A7MBM2 1401 aa24.98■■□□□ 1.59
SP3-208ENST00000640958 WNK3Q9BYP7 1800 aa24.97■■□□□ 1.59
SP3-208ENST00000640958 ITGB4P16144 1822 aa24.97■■□□□ 1.59
SP3-208ENST00000640958 PLBD2Q8NHP8 589 aa24.97■■□□□ 1.59
SP3-208ENST00000640958 COL15A1P39059 1388 aa24.96■■□□□ 1.59
SP3-208ENST00000640958 TTC41PQ6P2S7 1318 aa24.96■■□□□ 1.59
SP3-208ENST00000640958 LTBP4Q8N2S1 1624 aa24.96■■□□□ 1.59
SP3-208ENST00000640958 CLASRPQ8N2M8 674 aaKnown RBP24.95■■□□□ 1.59
SP3-208ENST00000640958 TJP1Q07157 1748 aa24.95■■□□□ 1.58
SP3-208ENST00000640958 EPHA10Q5JZY3 1008 aa24.95■■□□□ 1.58
SP3-208ENST00000640958 SASH1O94885 1247 aa24.92■■□□□ 1.58
SP3-208ENST00000640958 PTCD1O75127 700 aaKnown RBP24.92■■□□□ 1.58
SP3-208ENST00000640958 GLRX3O76003 335 aaKnown RBP24.91■■□□□ 1.58
SP3-208ENST00000640958 MAP4K4O95819 1239 aaPredicted RBP24.91■■□□□ 1.58
SP3-208ENST00000640958 LRP6O75581 1613 aa24.91■■□□□ 1.58
SP3-208ENST00000640958 ATP5J2-PTCD1G3V325 749 aa24.91■■□□□ 1.58
SP3-208ENST00000640958 A1BGP04217 495 aa24.91■■□□□ 1.58
SP3-208ENST00000640958 CASP7P55210 303 aa24.91■■□□□ 1.58
SP3-208ENST00000640958 G3BP1Q13283 466 aaKnown RBP eCLIP24.91■■□□□ 1.58
SP3-208ENST00000640958 TMOD3Q9NYL9 352 aa24.91■■□□□ 1.58
SP3-208ENST00000640958 CIZ1Q9ULV3 898 aaPredicted RBP24.91■■□□□ 1.58
SP3-208ENST00000640958 RABL6Q3YEC7 729 aaPredicted RBP24.9■■□□□ 1.58
SP3-208ENST00000640958 TTLL7Q6ZT98 887 aa24.9■■□□□ 1.58
SP3-208ENST00000640958 CNTROBQ8N137 903 aa24.9■■□□□ 1.58
SP3-208ENST00000640958 UBE3BQ7Z3V4 1068 aa24.89■■□□□ 1.58
SP3-208ENST00000640958 IL25Q9H293 177 aa24.89■■□□□ 1.58
SP3-208ENST00000640958 ECHDC1Q9NTX5 307 aa24.89■■□□□ 1.58
SP3-208ENST00000640958 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.89■■□□□ 1.58
SP3-208ENST00000640958 IFIT2P09913 472 aaKnown RBP24.88■■□□□ 1.57
SP3-208ENST00000640958 AACSQ86V21 672 aa24.88■■□□□ 1.57
SP3-208ENST00000640958 JARID2Q92833 1246 aaPredicted RBP24.88■■□□□ 1.57
SP3-208ENST00000640958 ANO2Q9NQ90 1003 aa24.88■■□□□ 1.57
SP3-208ENST00000640958 A0A087WZG4 1122 aa24.88■■□□□ 1.57
SP3-208ENST00000640958 RFX5P48382 616 aaPredicted RBP24.88■■□□□ 1.57
SP3-208ENST00000640958 EPB41L2O43491 1005 aaKnown RBP24.87■■□□□ 1.57
SP3-208ENST00000640958 KLHDC4Q8TBB5 520 aa24.87■■□□□ 1.57
SP3-208ENST00000640958 GPATCH3Q96I76 525 aa24.87■■□□□ 1.57
SP3-208ENST00000640958 EAF2Q96CJ1 260 aaPredicted RBP24.86■■□□□ 1.57
SP3-208ENST00000640958 COPRSQ9NQ92 184 aa24.86■■□□□ 1.57
SP3-208ENST00000640958 PHLPP1O60346 1717 aa24.86■■□□□ 1.57
SP3-208ENST00000640958 NRAPQ86VF7 1730 aa24.86■■□□□ 1.57
SP3-208ENST00000640958 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.86■■□□□ 1.57
SP3-208ENST00000640958 PIGBQ92521 554 aa24.86■■□□□ 1.57
SP3-208ENST00000640958 IL17RAQ96F46 866 aa24.86■■□□□ 1.57
SP3-208ENST00000640958 SIL1Q9H173 461 aa24.86■■□□□ 1.57
SP3-208ENST00000640958 HSP90AA1P07900 732 aaKnown RBP24.85■■□□□ 1.57
SP3-208ENST00000640958 MCCP23508 829 aa24.85■■□□□ 1.57
SP3-208ENST00000640958 SGSM2O43147 1006 aa24.85■■□□□ 1.57
SP3-208ENST00000640958 ST18O60284 1047 aa24.85■■□□□ 1.57
SP3-208ENST00000640958 PALD1Q9ULE6 856 aa24.85■■□□□ 1.57
SP3-208ENST00000640958 H7C1W4 665 aa24.84■■□□□ 1.57
SP3-208ENST00000640958 ANAPC15P60006 121 aa24.84■■□□□ 1.57
SP3-208ENST00000640958 ASAP1Q9ULH1 1129 aa24.84■■□□□ 1.57
SP3-208ENST00000640958 MCM4P33991 863 aa24.83■■□□□ 1.57
SP3-208ENST00000640958 PTPN12Q05209 780 aaKnown RBP24.83■■□□□ 1.57
SP3-208ENST00000640958 GSE1Q14687 1217 aa24.83■■□□□ 1.57
SP3-208ENST00000640958 FOXD4L1Q9NU39 408 aa24.83■■□□□ 1.57
SP3-208ENST00000640958 VSIG10Q8N0Z9 540 aa24.83■■□□□ 1.57
SP3-208ENST00000640958 ATG3Q9NT62 314 aa24.82■■□□□ 1.56
SP3-208ENST00000640958 CWC25Q9NXE8 425 aaPredicted RBP24.82■■□□□ 1.56
SP3-208ENST00000640958 TLR7Q9NYK1 1049 aaKnown RBP24.82■■□□□ 1.56
SP3-208ENST00000640958 BCL9O00512 1426 aa24.82■■□□□ 1.56
SP3-208ENST00000640958 RAB3GAP1Q15042 981 aa24.82■■□□□ 1.56
SP3-208ENST00000640958 ZBTB3Q9H5J0 574 aa24.82■■□□□ 1.56
SP3-208ENST00000640958 CCDC8Q9H0W5 538 aaPredicted RBP24.81■■□□□ 1.56
SP3-208ENST00000640958 FOXO4P98177 505 aa24.8■■□□□ 1.56
SP3-208ENST00000640958 RAD50Q92878 1312 aa24.8■■□□□ 1.56
SP3-208ENST00000640958 DOT1LQ8TEK3 1739 aa24.8■■□□□ 1.56
SP3-208ENST00000640958 DNAJC10Q8IXB1 793 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms