RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 FMNL2Q96PY5 1086 aa16.32■□□□□ 0.2
SCARB2-227ENST00000640957 COL3A1P02461 1466 aaPredicted RBP16.31■□□□□ 0.2
SCARB2-227ENST00000640957 GLI2P10070 1586 aa16.31■□□□□ 0.2
SCARB2-227ENST00000640957 NEK11Q8NG66 645 aa16.31■□□□□ 0.2
SCARB2-227ENST00000640957 HSPA4P34932 840 aa16.31■□□□□ 0.2
SCARB2-227ENST00000640957 RBM6P78332 1123 aaKnown RBP16.31■□□□□ 0.2
SCARB2-227ENST00000640957 EIF4A2Q14240 407 aaKnown RBP16.31■□□□□ 0.2
SCARB2-227ENST00000640957 ME3Q16798 604 aa16.31■□□□□ 0.2
SCARB2-227ENST00000640957 ZNF75DP51815 510 aa16.3■□□□□ 0.2
SCARB2-227ENST00000640957 HDGFP51858 240 aaKnown RBP16.3■□□□□ 0.2
SCARB2-227ENST00000640957 OS9Q13438 667 aaPredicted RBP16.3■□□□□ 0.2
SCARB2-227ENST00000640957 FAM177A1Q8N128 213 aaPredicted RBP16.3■□□□□ 0.2
SCARB2-227ENST00000640957 STK31Q9BXU1 1019 aa16.3■□□□□ 0.2
SCARB2-227ENST00000640957 FTOQ9C0B1 505 aaKnown RBP eCLIP16.3■□□□□ 0.2
SCARB2-227ENST00000640957 PDRG1Q9NUG6 133 aa16.3■□□□□ 0.2
SCARB2-227ENST00000640957 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.3■□□□□ 0.2
SCARB2-227ENST00000640957 ACEP12821 1306 aa16.3■□□□□ 0.2
SCARB2-227ENST00000640957 RGS12O14924 1447 aa16.3■□□□□ 0.2
SCARB2-227ENST00000640957 CAPN2P17655 700 aa16.3■□□□□ 0.2
SCARB2-227ENST00000640957 ZCCHC17Q9NP64 241 aaKnown RBP16.3■□□□□ 0.2
SCARB2-227ENST00000640957 ADGRB1O14514 1584 aa16.3■□□□□ 0.2
SCARB2-227ENST00000640957 SKILP12757 684 aa16.3■□□□□ 0.2
SCARB2-227ENST00000640957 PTPN14Q15678 1187 aa16.3■□□□□ 0.2
SCARB2-227ENST00000640957 TIGD1Q96MW7 591 aa16.3■□□□□ 0.2
SCARB2-227ENST00000640957 FAM135BQ49AJ0 1406 aa16.3■□□□□ 0.2
SCARB2-227ENST00000640957 RIMS2Q9UQ26 1411 aa16.3■□□□□ 0.2
SCARB2-227ENST00000640957 PUS7Q96PZ0 661 aaKnown RBP16.29■□□□□ 0.2
SCARB2-227ENST00000640957 HECW2Q9P2P5 1572 aa16.29■□□□□ 0.2
SCARB2-227ENST00000640957 GYS2P54840 703 aa16.29■□□□□ 0.2
SCARB2-227ENST00000640957 TAF6LQ9Y6J9 622 aa16.29■□□□□ 0.2
SCARB2-227ENST00000640957 FRMPD1Q5SYB0 1578 aa16.29■□□□□ 0.2
SCARB2-227ENST00000640957 ANXA1P04083 346 aa16.29■□□□□ 0.2
SCARB2-227ENST00000640957 NCBP3Q53F19 620 aaKnown RBP16.29■□□□□ 0.2
SCARB2-227ENST00000640957 CHMP4CQ96CF2 233 aa16.29■□□□□ 0.2
SCARB2-227ENST00000640957 CCDC9Q9Y3X0 531 aaKnown RBP16.29■□□□□ 0.2
SCARB2-227ENST00000640957 SPATA32Q96LK8 384 aa16.28■□□□□ 0.2
SCARB2-227ENST00000640957 VWDEQ8N2E2 1590 aa16.28■□□□□ 0.2
SCARB2-227ENST00000640957 ARAP3Q8WWN8 1544 aa16.28■□□□□ 0.2
SCARB2-227ENST00000640957 ATP6V1DQ9Y5K8 247 aa16.28■□□□□ 0.2
SCARB2-227ENST00000640957 EID1Q9Y6B2 187 aa16.28■□□□□ 0.2
SCARB2-227ENST00000640957 HNRNPH2P55795 449 aaKnown RBP16.27■□□□□ 0.2
SCARB2-227ENST00000640957 ST3GAL1Q11201 340 aa16.27■□□□□ 0.2
SCARB2-227ENST00000640957 ZNF446Q9NWS9 450 aa16.27■□□□□ 0.2
SCARB2-227ENST00000640957 DEPDC5O75140 1603 aa16.27■□□□□ 0.2
SCARB2-227ENST00000640957 PAXIP1Q6ZW49 1069 aaPredicted RBP16.27■□□□□ 0.2
SCARB2-227ENST00000640957 RAD50Q92878 1312 aa16.27■□□□□ 0.19
SCARB2-227ENST00000640957 LTKP29376 864 aa16.27■□□□□ 0.19
SCARB2-227ENST00000640957 KRT85P78386 507 aa16.27■□□□□ 0.19
SCARB2-227ENST00000640957 ISM2Q6H9L7 571 aa16.27■□□□□ 0.19
SCARB2-227ENST00000640957 LARP1Q6PKG0 1096 aaKnown RBP16.27■□□□□ 0.19
SCARB2-227ENST00000640957 C11orf57Q6ZUT1 292 aaPredicted RBP16.27■□□□□ 0.19
SCARB2-227ENST00000640957 LRRC2Q9BYS8 371 aa16.27■□□□□ 0.19
SCARB2-227ENST00000640957 HYPKQ9NX55 129 aa16.27■□□□□ 0.19
SCARB2-227ENST00000640957 TPCN1Q9ULQ1 816 aa16.27■□□□□ 0.19
SCARB2-227ENST00000640957 GOLGA6L19H0YKK7 550 aa16.26■□□□□ 0.19
SCARB2-227ENST00000640957 ANAPC15P60006 121 aa16.26■□□□□ 0.19
SCARB2-227ENST00000640957 MORC2Q9Y6X9 1032 aaPredicted RBP16.26■□□□□ 0.19
SCARB2-227ENST00000640957 GABPB1Q06547 395 aaPredicted RBP16.26■□□□□ 0.19
SCARB2-227ENST00000640957 TTC14Q96N46 770 aa16.26■□□□□ 0.19
SCARB2-227ENST00000640957 OSBPL3Q9H4L5 887 aa16.26■□□□□ 0.19
SCARB2-227ENST00000640957 NRXN1Q9ULB1 1477 aa16.25■□□□□ 0.19
SCARB2-227ENST00000640957 TMEM87AQ8NBN3 555 aa16.25■□□□□ 0.19
SCARB2-227ENST00000640957 AMOTL2Q9Y2J4 779 aa16.25■□□□□ 0.19
SCARB2-227ENST00000640957 SRGAP3O43295 1099 aa16.25■□□□□ 0.19
SCARB2-227ENST00000640957 SEC31AO94979 1220 aaKnown RBP16.25■□□□□ 0.19
SCARB2-227ENST00000640957 IFIT2P09913 472 aaKnown RBP16.25■□□□□ 0.19
SCARB2-227ENST00000640957 SKIDA1Q1XH10 827 aa16.25■□□□□ 0.19
SCARB2-227ENST00000640957 SYT10Q6XYQ8 523 aa16.25■□□□□ 0.19
SCARB2-227ENST00000640957 PPP1R42Q7Z4L9 355 aa16.25■□□□□ 0.19
SCARB2-227ENST00000640957 NOL10Q9BSC4 688 aaKnown RBP16.25■□□□□ 0.19
SCARB2-227ENST00000640957 PRR36Q9H6K5 1346 aa16.25■□□□□ 0.19
SCARB2-227ENST00000640957 CCDC66A2RUB6 948 aa16.25■□□□□ 0.19
SCARB2-227ENST00000640957 CCDC69A6NI79 296 aa16.25■□□□□ 0.19
SCARB2-227ENST00000640957 BECN2A8MW95 431 aa16.25■□□□□ 0.19
SCARB2-227ENST00000640957 SGSM2O43147 1006 aa16.25■□□□□ 0.19
SCARB2-227ENST00000640957 JAK2O60674 1132 aa16.25■□□□□ 0.19
SCARB2-227ENST00000640957 ZNF397Q8NF99 534 aaPredicted RBP16.24■□□□□ 0.19
SCARB2-227ENST00000640957 LSG1Q9H089 658 aaKnown RBP16.24■□□□□ 0.19
SCARB2-227ENST00000640957 PHAXQ9H814 394 aaKnown RBP16.24■□□□□ 0.19
SCARB2-227ENST00000640957 RAB11FIP3O75154 756 aa16.24■□□□□ 0.19
SCARB2-227ENST00000640957 GUCY1B3Q02153 619 aa16.24■□□□□ 0.19
SCARB2-227ENST00000640957 LRRC8AQ8IWT6 810 aa16.24■□□□□ 0.19
SCARB2-227ENST00000640957 CHL1O00533 1208 aa16.23■□□□□ 0.19
SCARB2-227ENST00000640957 FLIIQ13045 1269 aa16.23■□□□□ 0.19
SCARB2-227ENST00000640957 ABTB2Q8N961 1025 aa16.23■□□□□ 0.19
SCARB2-227ENST00000640957 CCDC34Q96HJ3 373 aa16.23■□□□□ 0.19
SCARB2-227ENST00000640957 PNPLA6Q8IY17 1366 aa16.23■□□□□ 0.19
SCARB2-227ENST00000640957 TPM3P06753 285 aa16.23■□□□□ 0.19
SCARB2-227ENST00000640957 GOLGA8FQ08AF8 430 aa16.23■□□□□ 0.19
SCARB2-227ENST00000640957 GOLGA8DPQ0D2H9 430 aa16.23■□□□□ 0.19
SCARB2-227ENST00000640957 UBTFL1P0CB47 393 aaPredicted RBP16.23■□□□□ 0.19
SCARB2-227ENST00000640957 FAM227BQ96M60 508 aa16.23■□□□□ 0.19
SCARB2-227ENST00000640957 NDUFB9Q9Y6M9 179 aa16.23■□□□□ 0.19
SCARB2-227ENST00000640957 CAMSAP1Q5T5Y3 1602 aa16.23■□□□□ 0.19
SCARB2-227ENST00000640957 TNNT3P45378 269 aaPredicted RBP16.22■□□□□ 0.19
SCARB2-227ENST00000640957 MTHFSDQ2M296 383 aaKnown RBP16.22■□□□□ 0.19
SCARB2-227ENST00000640957 IPO4Q8TEX9 1081 aaKnown RBP16.22■□□□□ 0.19
SCARB2-227ENST00000640957 PA2G4Q9UQ80 394 aaKnown RBP16.22■□□□□ 0.19
SCARB2-227ENST00000640957 PAXBP1Q9Y5B6 917 aa16.22■□□□□ 0.19
SCARB2-227ENST00000640957 CYP46A1Q9Y6A2 500 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms