RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 PRKAR2BP31323 418 aa15.5■□□□□ 0.07
ERGIC3-220ENST00000640748 SMC1BQ8NDV3 1235 aa15.5■□□□□ 0.07
ERGIC3-220ENST00000640748 RUNDC1Q96C34 613 aa15.5■□□□□ 0.07
ERGIC3-220ENST00000640748 FMNL2Q96PY5 1086 aa15.5■□□□□ 0.07
ERGIC3-220ENST00000640748 SUPT16HQ9Y5B9 1047 aaKnown RBP15.5■□□□□ 0.07
ERGIC3-220ENST00000640748 PCNTO95613 3336 aa15.49■□□□□ 0.07
ERGIC3-220ENST00000640748 VEGFAP15692 232 aaPredicted RBP15.49■□□□□ 0.07
ERGIC3-220ENST00000640748 ZNF330Q9Y3S2 320 aaPredicted RBP15.49■□□□□ 0.07
ERGIC3-220ENST00000640748 TIAM2Q8IVF5 1701 aa15.48■□□□□ 0.07
ERGIC3-220ENST00000640748 PRAMEF22A3QJZ6 481 aa15.48■□□□□ 0.07
ERGIC3-220ENST00000640748 APAF1O14727 1248 aa15.48■□□□□ 0.07
ERGIC3-220ENST00000640748 U2AF1L5P0DN76 240 aaPredicted RBP15.48■□□□□ 0.07
ERGIC3-220ENST00000640748 U2AF1Q01081 240 aaKnown RBP eCLIP15.48■□□□□ 0.07
ERGIC3-220ENST00000640748 USP16Q9Y5T5 823 aa15.48■□□□□ 0.07
ERGIC3-220ENST00000640748 BTBD11A6QL63 1104 aa15.47■□□□□ 0.07
ERGIC3-220ENST00000640748 C21orf2O43822 256 aa15.47■□□□□ 0.07
ERGIC3-220ENST00000640748 PDE6BP35913 854 aa15.47■□□□□ 0.07
ERGIC3-220ENST00000640748 PIP4K2AP48426 406 aaPredicted RBP15.47■□□□□ 0.07
ERGIC3-220ENST00000640748 ZNF622Q969S3 477 aaKnown RBP eCLIP15.47■□□□□ 0.07
ERGIC3-220ENST00000640748 PNNQ9H307 717 aaKnown RBP15.46■□□□□ 0.07
ERGIC3-220ENST00000640748 ZNF219Q9P2Y4 722 aaPredicted RBP15.46■□□□□ 0.07
ERGIC3-220ENST00000640748 PDZRN3Q9UPQ7 1066 aa15.46■□□□□ 0.07
ERGIC3-220ENST00000640748 BCORQ6W2J9 1755 aa15.46■□□□□ 0.07
ERGIC3-220ENST00000640748 CCDC88AQ3V6T2 1871 aa15.46■□□□□ 0.06
ERGIC3-220ENST00000640748 SRGNP10124 158 aa15.45■□□□□ 0.06
ERGIC3-220ENST00000640748 DZIP3Q86Y13 1208 aaKnown RBP15.45■□□□□ 0.06
ERGIC3-220ENST00000640748 CNBD1Q8NA66 436 aa15.45■□□□□ 0.06
ERGIC3-220ENST00000640748 SETDB2Q96T68 719 aa15.45■□□□□ 0.06
ERGIC3-220ENST00000640748 FER1L6Q2WGJ9 1857 aa15.45■□□□□ 0.06
ERGIC3-220ENST00000640748 ZNF521Q96K83 1311 aa15.44■□□□□ 0.06
ERGIC3-220ENST00000640748 LTBP3Q9NS15 1303 aa15.44■□□□□ 0.06
ERGIC3-220ENST00000640748 NCBP3Q53F19 620 aaKnown RBP15.44■□□□□ 0.06
ERGIC3-220ENST00000640748 COL13A1Q5TAT6 717 aaPredicted RBP15.44■□□□□ 0.06
ERGIC3-220ENST00000640748 STYK1Q6J9G0 422 aa15.44■□□□□ 0.06
ERGIC3-220ENST00000640748 PRPF40BQ6NWY9 871 aaKnown RBP15.44■□□□□ 0.06
ERGIC3-220ENST00000640748 MCM10Q7L590 875 aa15.44■□□□□ 0.06
ERGIC3-220ENST00000640748 SLX4Q8IY92 1834 aa15.44■□□□□ 0.06
ERGIC3-220ENST00000640748 NBPF26B4DH59 902 aa15.43■□□□□ 0.06
ERGIC3-220ENST00000640748 GOLGA2Q08379 1002 aa15.43■□□□□ 0.06
ERGIC3-220ENST00000640748 ERFEQ4G0M1 354 aa15.43■□□□□ 0.06
ERGIC3-220ENST00000640748 NBPF10Q6P3W6 841 aaKnown RBP15.43■□□□□ 0.06
ERGIC3-220ENST00000640748 NBPF15Q8N660 670 aa15.43■□□□□ 0.06
ERGIC3-220ENST00000640748 C7orf43Q8WVR3 580 aa15.43■□□□□ 0.06
ERGIC3-220ENST00000640748 CDCA7LQ96GN5 454 aa15.43■□□□□ 0.06
ERGIC3-220ENST00000640748 SNRPA1P09661 255 aaKnown RBP15.42■□□□□ 0.06
ERGIC3-220ENST00000640748 DCTN1Q14203 1278 aa15.42■□□□□ 0.06
ERGIC3-220ENST00000640748 CNKSR1Q969H4 720 aa15.42■□□□□ 0.06
ERGIC3-220ENST00000640748 TAOK3Q9H2K8 898 aa15.42■□□□□ 0.06
ERGIC3-220ENST00000640748 DICER1Q9UPY3 1922 aaKnown RBP15.41■□□□□ 0.06
ERGIC3-220ENST00000640748 KLRG2A4D1S0 409 aaPredicted RBP15.41■□□□□ 0.06
ERGIC3-220ENST00000640748 ST5P78524 1137 aa15.41■□□□□ 0.06
ERGIC3-220ENST00000640748 CLEC4GQ6UXB4 293 aa15.41■□□□□ 0.06
ERGIC3-220ENST00000640748 MASTLQ96GX5 879 aa15.41■□□□□ 0.06
ERGIC3-220ENST00000640748 MAPK8IP3Q9UPT6 1336 aa15.41■□□□□ 0.06
ERGIC3-220ENST00000640748 DPY19L2Q6NUT2 758 aa15.4■□□□□ 0.06
ERGIC3-220ENST00000640748 NPM2Q86SE8 214 aaKnown RBP15.4■□□□□ 0.06
ERGIC3-220ENST00000640748 ARFGEF2Q9Y6D5 1785 aa15.39■□□□□ 0.05
ERGIC3-220ENST00000640748 DDNO94850 711 aaPredicted RBP15.39■□□□□ 0.05
ERGIC3-220ENST00000640748 POTEIP0CG38 1075 aa15.39■□□□□ 0.05
ERGIC3-220ENST00000640748 POTEJP0CG39 1038 aa15.39■□□□□ 0.05
ERGIC3-220ENST00000640748 SLFN5Q08AF3 891 aa15.39■□□□□ 0.05
ERGIC3-220ENST00000640748 CCDC27Q2M243 656 aa15.39■□□□□ 0.05
ERGIC3-220ENST00000640748 ERICH6BQ5W0A0 696 aa15.39■□□□□ 0.05
ERGIC3-220ENST00000640748 NBPF5PQ86XG9 351 aaPredicted RBP15.39■□□□□ 0.05
ERGIC3-220ENST00000640748 PLEKHF1Q96S99 279 aa15.39■□□□□ 0.05
ERGIC3-220ENST00000640748 RGL2O15211 777 aa15.38■□□□□ 0.05
ERGIC3-220ENST00000640748 NPHP1O15259 732 aa15.38■□□□□ 0.05
ERGIC3-220ENST00000640748 HTATSF1O43719 755 aaKnown RBP15.38■□□□□ 0.05
ERGIC3-220ENST00000640748 NEFMP07197 916 aa15.38■□□□□ 0.05
ERGIC3-220ENST00000640748 RTF1Q92541 710 aaKnown RBP15.38■□□□□ 0.05
ERGIC3-220ENST00000640748 RNF123Q5XPI4 1314 aa15.38■□□□□ 0.05
ERGIC3-220ENST00000640748 E9PSI1 815 aa15.37■□□□□ 0.05
ERGIC3-220ENST00000640748 NPR1P16066 1061 aa15.37■□□□□ 0.05
ERGIC3-220ENST00000640748 HLFQ16534 295 aa15.37■□□□□ 0.05
ERGIC3-220ENST00000640748 SOGA3Q5TF21 947 aa15.37■□□□□ 0.05
ERGIC3-220ENST00000640748 OLFM4Q6UX06 510 aa15.37■□□□□ 0.05
ERGIC3-220ENST00000640748 WWC1Q8IX03 1113 aa15.37■□□□□ 0.05
ERGIC3-220ENST00000640748 MIS18AQ9NYP9 233 aa15.37■□□□□ 0.05
ERGIC3-220ENST00000640748 RCAN3Q9UKA8 241 aa15.37■□□□□ 0.05
ERGIC3-220ENST00000640748 ZNF652Q9Y2D9 606 aa15.37■□□□□ 0.05
ERGIC3-220ENST00000640748 CACNA1SQ13698 1873 aa15.37■□□□□ 0.05
ERGIC3-220ENST00000640748 TAF7Q15545 349 aaPredicted RBP15.36■□□□□ 0.05
ERGIC3-220ENST00000640748 NEUROD2Q15784 382 aa15.36■□□□□ 0.05
ERGIC3-220ENST00000640748 DUSP27Q5VZP5 1158 aa15.36■□□□□ 0.05
ERGIC3-220ENST00000640748 CHADLQ6NUI6 762 aa15.36■□□□□ 0.05
ERGIC3-220ENST00000640748 WDR63Q8IWG1 891 aa15.36■□□□□ 0.05
ERGIC3-220ENST00000640748 TRMT2AQ8IZ69 625 aaKnown RBP15.36■□□□□ 0.05
ERGIC3-220ENST00000640748 NIP7Q9Y221 180 aaKnown RBP eCLIP15.36■□□□□ 0.05
ERGIC3-220ENST00000640748 RRP7AQ9Y3A4 280 aaKnown RBP15.36■□□□□ 0.05
ERGIC3-220ENST00000640748 HSPA1AP0DMV8 641 aaKnown RBP15.35■□□□□ 0.05
ERGIC3-220ENST00000640748 HSPA1BP0DMV9 641 aaKnown RBP15.35■□□□□ 0.05
ERGIC3-220ENST00000640748 CCDC93Q567U6 631 aa15.35■□□□□ 0.05
ERGIC3-220ENST00000640748 L3MBTL3Q96JM7 780 aaPredicted RBP15.35■□□□□ 0.05
ERGIC3-220ENST00000640748 SNED1Q8TER0 1413 aa15.34■□□□□ 0.05
ERGIC3-220ENST00000640748 TMPOP42166 694 aaKnown RBP15.34■□□□□ 0.05
ERGIC3-220ENST00000640748 TPTE2Q6XPS3 522 aa15.34■□□□□ 0.05
ERGIC3-220ENST00000640748 ZNF277Q9NRM2 450 aaPredicted RBP15.34■□□□□ 0.05
ERGIC3-220ENST00000640748 ZNF541Q9H0D2 1346 aa15.34■□□□□ 0.05
ERGIC3-220ENST00000640748 FAM177BA6PVY3 158 aa15.33■□□□□ 0.04
ERGIC3-220ENST00000640748 IRX6P78412 446 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms