RNA–Protein interactions for RNA: ENST00000640717.1

SPIN3-243, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-243ENST00000640717 CLASRPQ8N2M8 674 aaKnown RBP15.58■□□□□ 0.09
SPIN3-243ENST00000640717 BOLA2Q9H3K6 86 aa15.58■□□□□ 0.09
SPIN3-243ENST00000640717 GCKRQ14397 625 aa15.58■□□□□ 0.08
SPIN3-243ENST00000640717 K7ELQ4 463 aaPredicted RBP15.57■□□□□ 0.08
SPIN3-243ENST00000640717 CHGBP05060 677 aa15.57■□□□□ 0.08
SPIN3-243ENST00000640717 G3BP1Q13283 466 aaKnown RBP eCLIP15.57■□□□□ 0.08
SPIN3-243ENST00000640717 GSE1Q14687 1217 aa15.57■□□□□ 0.08
SPIN3-243ENST00000640717 ZGPATQ8N5A5 531 aaKnown RBP15.57■□□□□ 0.08
SPIN3-243ENST00000640717 ESYT1Q9BSJ8 1104 aa15.57■□□□□ 0.08
SPIN3-243ENST00000640717 REC8O95072 547 aa15.57■□□□□ 0.08
SPIN3-243ENST00000640717 PKP1Q13835 747 aa15.57■□□□□ 0.08
SPIN3-243ENST00000640717 CPA1P15085 419 aa15.57■□□□□ 0.08
SPIN3-243ENST00000640717 CHMP5Q9NZZ3 219 aa15.57■□□□□ 0.08
SPIN3-243ENST00000640717 SALL3Q9BXA9 1300 aa15.56■□□□□ 0.08
SPIN3-243ENST00000640717 EAF2Q96CJ1 260 aaPredicted RBP15.56■□□□□ 0.08
SPIN3-243ENST00000640717 RTN4Q9NQC3 1192 aaKnown RBP15.56■□□□□ 0.08
SPIN3-243ENST00000640717 ALS2Q96Q42 1657 aa15.56■□□□□ 0.08
SPIN3-243ENST00000640717 FAM177BA6PVY3 158 aa15.56■□□□□ 0.08
SPIN3-243ENST00000640717 SASH1O94885 1247 aa15.56■□□□□ 0.08
SPIN3-243ENST00000640717 PI4K2BQ8TCG2 481 aa15.56■□□□□ 0.08
SPIN3-243ENST00000640717 ACSBG1Q96GR2 724 aa15.56■□□□□ 0.08
SPIN3-243ENST00000640717 PCDH11XQ9BZA7 1347 aa15.55■□□□□ 0.08
SPIN3-243ENST00000640717 PCDH11YQ9BZA8 1340 aa15.55■□□□□ 0.08
SPIN3-243ENST00000640717 ALDH1L1O75891 902 aa15.55■□□□□ 0.08
SPIN3-243ENST00000640717 SSFA2P28290 1259 aa15.55■□□□□ 0.08
SPIN3-243ENST00000640717 METTL22Q9BUU2 404 aaPredicted RBP15.55■□□□□ 0.08
SPIN3-243ENST00000640717 DCCP43146 1447 aa15.55■□□□□ 0.08
SPIN3-243ENST00000640717 HEG1Q9ULI3 1381 aa15.55■□□□□ 0.08
SPIN3-243ENST00000640717 NCAPD2Q15021 1401 aa15.55■□□□□ 0.08
SPIN3-243ENST00000640717 DNAJC10Q8IXB1 793 aa15.55■□□□□ 0.08
SPIN3-243ENST00000640717 ZNF594Q96JF6 807 aaPredicted RBP15.55■□□□□ 0.08
SPIN3-243ENST00000640717 TMOD3Q9NYL9 352 aa15.55■□□□□ 0.08
SPIN3-243ENST00000640717 KIF1AQ12756 1690 aa15.55■□□□□ 0.08
SPIN3-243ENST00000640717 GPTP24298 496 aa15.54■□□□□ 0.08
SPIN3-243ENST00000640717 SYNE4Q8N205 404 aa15.54■□□□□ 0.08
SPIN3-243ENST00000640717 OSBPL3Q9H4L5 887 aa15.54■□□□□ 0.08
SPIN3-243ENST00000640717 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.54■□□□□ 0.081e-6■□□□□ 10.8
SPIN3-243ENST00000640717 USP54Q70EL1 1684 aa15.54■□□□□ 0.08
SPIN3-243ENST00000640717 GOLGB1Q14789 3259 aaKnown RBP15.54■□□□□ 0.08
SPIN3-243ENST00000640717 LMBR1LQ6UX01 489 aa15.54■□□□□ 0.08
SPIN3-243ENST00000640717 TNPO1Q92973 898 aaKnown RBP15.54■□□□□ 0.08
SPIN3-243ENST00000640717 CHMP4AQ9BY43 222 aa15.54■□□□□ 0.08
SPIN3-243ENST00000640717 RAB11FIP3O75154 756 aa15.53■□□□□ 0.08
SPIN3-243ENST00000640717 PIGBQ92521 554 aa15.53■□□□□ 0.08
SPIN3-243ENST00000640717 CARD10Q9BWT7 1032 aa15.53■□□□□ 0.08
SPIN3-243ENST00000640717 MCM4P33991 863 aa15.52■□□□□ 0.08
SPIN3-243ENST00000640717 SLFNL1Q499Z3 407 aa15.52■□□□□ 0.08
SPIN3-243ENST00000640717 LRP10Q7Z4F1 713 aa15.52■□□□□ 0.08
SPIN3-243ENST00000640717 NEUROD6Q96NK8 337 aa15.52■□□□□ 0.07
SPIN3-243ENST00000640717 COL5A2P05997 1499 aaPredicted RBP15.52■□□□□ 0.07
SPIN3-243ENST00000640717 LMO7Q8WWI1 1683 aa15.52■□□□□ 0.07
SPIN3-243ENST00000640717 TFCP2Q12800 502 aa15.52■□□□□ 0.07
SPIN3-243ENST00000640717 RABEP1Q15276 862 aa15.52■□□□□ 0.07
SPIN3-243ENST00000640717 CPDO75976 1380 aa15.51■□□□□ 0.07
SPIN3-243ENST00000640717 KCNQ4P56696 695 aa15.51■□□□□ 0.07
SPIN3-243ENST00000640717 SNX21Q969T3 373 aa15.51■□□□□ 0.07
SPIN3-243ENST00000640717 FAM227BQ96M60 508 aa15.51■□□□□ 0.07
SPIN3-243ENST00000640717 DNAJC2Q99543 621 aaKnown RBP15.51■□□□□ 0.07
SPIN3-243ENST00000640717 DIAPH3Q9NSV4 1193 aa15.51■□□□□ 0.07
SPIN3-243ENST00000640717 BRPF3Q9ULD4 1205 aa15.51■□□□□ 0.07
SPIN3-243ENST00000640717 STRCQ7RTU9 1775 aa15.51■□□□□ 0.07
SPIN3-243ENST00000640717 STAP2Q9UGK3 403 aa15.51■□□□□ 0.07
SPIN3-243ENST00000640717 KDM3BQ7LBC6 1761 aa15.5■□□□□ 0.07
SPIN3-243ENST00000640717 CNTROBQ8N137 903 aa15.5■□□□□ 0.07
SPIN3-243ENST00000640717 FAM89AQ96GI7 184 aa15.5■□□□□ 0.07
SPIN3-243ENST00000640717 ECHDC1Q9NTX5 307 aa15.5■□□□□ 0.07
SPIN3-243ENST00000640717 OVOS2A0A0G2JMS6 1433 aa15.5■□□□□ 0.07
SPIN3-243ENST00000640717 ST18O60284 1047 aa15.49■□□□□ 0.07
SPIN3-243ENST00000640717 TCEANC2Q96MN5 208 aa15.49■□□□□ 0.07
SPIN3-243ENST00000640717 PHRF1Q9P1Y6 1649 aaKnown RBP15.49■□□□□ 0.07
SPIN3-243ENST00000640717 PRIM1P49642 420 aaKnown RBP15.49■□□□□ 0.07
SPIN3-243ENST00000640717 HSP90AB4PQ58FF6 505 aa15.49■□□□□ 0.07
SPIN3-243ENST00000640717 KCNJ4P48050 445 aa15.49■□□□□ 0.07
SPIN3-243ENST00000640717 TIMM10P62072 90 aa15.49■□□□□ 0.07
SPIN3-243ENST00000640717 PTH1RQ03431 593 aa15.49■□□□□ 0.07
SPIN3-243ENST00000640717 COL9A3Q14050 684 aaPredicted RBP15.49■□□□□ 0.07
SPIN3-243ENST00000640717 SMIM5Q71RC9 77 aa15.49■□□□□ 0.07
SPIN3-243ENST00000640717 RASEFQ8IZ41 740 aa15.49■□□□□ 0.07
SPIN3-243ENST00000640717 TBC1D2BQ9UPU7 963 aa15.49■□□□□ 0.07
SPIN3-243ENST00000640717 XIRP1Q702N8 1843 aaKnown RBP15.48■□□□□ 0.07
SPIN3-243ENST00000640717 KIAA1211Q6ZU35 1233 aa15.48■□□□□ 0.07
SPIN3-243ENST00000640717 IL27Q8NEV9 243 aa15.48■□□□□ 0.07
SPIN3-243ENST00000640717 PLBD2Q8NHP8 589 aa15.48■□□□□ 0.07
SPIN3-243ENST00000640717 FSD1Q9BTV5 496 aa15.48■□□□□ 0.07
SPIN3-243ENST00000640717 PXDNLA1KZ92 1463 aa15.47■□□□□ 0.07
SPIN3-243ENST00000640717 GLRX3O76003 335 aaKnown RBP15.47■□□□□ 0.07
SPIN3-243ENST00000640717 NCLP19338 710 aaKnown RBP15.47■□□□□ 0.07
SPIN3-243ENST00000640717 DBNDD2Q9BQY9 259 aa15.47■□□□□ 0.07
SPIN3-243ENST00000640717 FAM182BQ5T319 152 aa15.47■□□□□ 0.07
SPIN3-243ENST00000640717 PRPF40BQ6NWY9 871 aaKnown RBP15.47■□□□□ 0.07
SPIN3-243ENST00000640717 PUS3Q9BZE2 481 aaKnown RBP15.47■□□□□ 0.07
SPIN3-243ENST00000640717 COL18A1P39060 1754 aa15.47■□□□□ 0.07
SPIN3-243ENST00000640717 NCOA3Q9Y6Q9 1424 aa15.47■□□□□ 0.07
SPIN3-243ENST00000640717 TRAK2O60296 914 aa15.46■□□□□ 0.07
SPIN3-243ENST00000640717 PTPN12Q05209 780 aaKnown RBP15.46■□□□□ 0.07
SPIN3-243ENST00000640717 LRRC24Q50LG9 513 aa15.46■□□□□ 0.07
SPIN3-243ENST00000640717 MCCP23508 829 aa15.46■□□□□ 0.07
SPIN3-243ENST00000640717 DDX46Q7L014 1031 aaKnown RBP15.46■□□□□ 0.07
SPIN3-243ENST00000640717 ATG3Q9NT62 314 aa15.46■□□□□ 0.07
SPIN3-243ENST00000640717 AK9Q5TCS8 1911 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms