RNA–Protein interactions for RNA: ENST00000640463.1

SPIN3-239, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,133 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-239ENST00000640463 HSP90AB4PQ58FF6 505 aa16.81■□□□□ 0.28
SPIN3-239ENST00000640463 ORAI2Q96SN7 254 aa16.81■□□□□ 0.28
SPIN3-239ENST00000640463 TSPY26PQ9H489 355 aa16.81■□□□□ 0.28
SPIN3-239ENST00000640463 MED1Q15648 1581 aaPredicted RBP16.8■□□□□ 0.28
SPIN3-239ENST00000640463 USP54Q70EL1 1684 aa16.8■□□□□ 0.28
SPIN3-239ENST00000640463 GIGYF1O75420 1035 aaPredicted RBP16.8■□□□□ 0.28
SPIN3-239ENST00000640463 IFIT2P09913 472 aaKnown RBP16.8■□□□□ 0.28
SPIN3-239ENST00000640463 SYT1P21579 422 aa16.8■□□□□ 0.28
SPIN3-239ENST00000640463 MPNDQ8N594 471 aa16.8■□□□□ 0.28
SPIN3-239ENST00000640463 LIMCH1Q9UPQ0 1083 aa16.8■□□□□ 0.28
SPIN3-239ENST00000640463 AACSQ86V21 672 aa16.8■□□□□ 0.28
SPIN3-239ENST00000640463 CCDC83Q8IWF9 413 aa16.8■□□□□ 0.28
SPIN3-239ENST00000640463 NOL7Q9UMY1 257 aaKnown RBP16.8■□□□□ 0.28
SPIN3-239ENST00000640463 KCNH5Q8NCM2 988 aa16.79■□□□□ 0.28
SPIN3-239ENST00000640463 JAKMIP1Q96N16 626 aaKnown RBP16.79■□□□□ 0.28
SPIN3-239ENST00000640463 ECHDC1Q9NTX5 307 aa16.79■□□□□ 0.28
SPIN3-239ENST00000640463 EPB41L2O43491 1005 aaKnown RBP16.79■□□□□ 0.28
SPIN3-239ENST00000640463 GCP02774 474 aa16.79■□□□□ 0.28
SPIN3-239ENST00000640463 KSR2Q6VAB6 950 aa16.79■□□□□ 0.28
SPIN3-239ENST00000640463 SMC3Q9UQE7 1217 aa16.79■□□□□ 0.28
SPIN3-239ENST00000640463 TTC41PQ6P2S7 1318 aa16.79■□□□□ 0.28
SPIN3-239ENST00000640463 ZSCAN22P10073 491 aaPredicted RBP16.79■□□□□ 0.28
SPIN3-239ENST00000640463 CCDC8Q9H0W5 538 aaPredicted RBP16.79■□□□□ 0.28
SPIN3-239ENST00000640463 SIL1Q9H173 461 aa16.79■□□□□ 0.28
SPIN3-239ENST00000640463 FIBPO43427 364 aa16.78■□□□□ 0.28
SPIN3-239ENST00000640463 STX6O43752 255 aa16.78■□□□□ 0.28
SPIN3-239ENST00000640463 OFD1O75665 1012 aa16.78■□□□□ 0.28
SPIN3-239ENST00000640463 ANKRD24Q8TF21 1146 aa16.78■□□□□ 0.28
SPIN3-239ENST00000640463 SUCLG2Q96I99 432 aa16.78■□□□□ 0.28
SPIN3-239ENST00000640463 AXIN2Q9Y2T1 843 aa16.78■□□□□ 0.28
SPIN3-239ENST00000640463 COL9A3Q14050 684 aaPredicted RBP16.78■□□□□ 0.28
SPIN3-239ENST00000640463 SYAP1Q96A49 352 aaPredicted RBP16.78■□□□□ 0.28
SPIN3-239ENST00000640463 HYPKQ9NX55 129 aa16.78■□□□□ 0.28
SPIN3-239ENST00000640463 KLHDC4Q8TBB5 520 aa16.77■□□□□ 0.28
SPIN3-239ENST00000640463 FAM227BQ96M60 508 aa16.77■□□□□ 0.28
SPIN3-239ENST00000640463 MTX1Q13505 466 aa16.77■□□□□ 0.27
SPIN3-239ENST00000640463 HS1BP3Q53T59 392 aa16.77■□□□□ 0.27
SPIN3-239ENST00000640463 KAZALD1Q96I82 304 aa16.77■□□□□ 0.27
SPIN3-239ENST00000640463 PDRG1Q9NUG6 133 aa16.77■□□□□ 0.27
SPIN3-239ENST00000640463 USP42Q9H9J4 1324 aaKnown RBP16.77■□□□□ 0.27
SPIN3-239ENST00000640463 SLC39A6Q13433 755 aa16.76■□□□□ 0.27
SPIN3-239ENST00000640463 BICC1Q9H694 974 aaKnown RBP16.76■□□□□ 0.27
SPIN3-239ENST00000640463 TLR7Q9NYK1 1049 aaKnown RBP16.76■□□□□ 0.27
SPIN3-239ENST00000640463 AMOTQ4VCS5 1084 aa16.76■□□□□ 0.27
SPIN3-239ENST00000640463 ARHGEF25Q86VW2 580 aa16.76■□□□□ 0.27
SPIN3-239ENST00000640463 ANKLE2Q86XL3 938 aa16.76■□□□□ 0.27
SPIN3-239ENST00000640463 NECAB1Q8N987 351 aa16.76■□□□□ 0.27
SPIN3-239ENST00000640463 EAF2Q96CJ1 260 aaPredicted RBP16.76■□□□□ 0.27
SPIN3-239ENST00000640463 PODXL2Q9NZ53 605 aa16.76■□□□□ 0.27
SPIN3-239ENST00000640463 R3HCC1Q9Y3T6 440 aaKnown RBP16.76■□□□□ 0.27
SPIN3-239ENST00000640463 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.76■□□□□ 0.27
SPIN3-239ENST00000640463 ALDH1L1O75891 902 aa16.76■□□□□ 0.27
SPIN3-239ENST00000640463 SASH1O94885 1247 aa16.76■□□□□ 0.27
SPIN3-239ENST00000640463 GJB2P29033 226 aa16.76■□□□□ 0.27
SPIN3-239ENST00000640463 HSP90AA2PQ14568 343 aaPredicted RBP16.76■□□□□ 0.27
SPIN3-239ENST00000640463 RUFY2Q8WXA3 655 aa16.76■□□□□ 0.27
SPIN3-239ENST00000640463 ZKSCAN5Q9Y2L8 839 aa16.76■□□□□ 0.27
SPIN3-239ENST00000640463 CHMP4AQ9BY43 222 aa16.75■□□□□ 0.27
SPIN3-239ENST00000640463 LMO7Q8WWI1 1683 aa16.75■□□□□ 0.27
SPIN3-239ENST00000640463 F13A1P00488 732 aa16.75■□□□□ 0.27
SPIN3-239ENST00000640463 KCNJ4P48050 445 aa16.75■□□□□ 0.27
SPIN3-239ENST00000640463 JARID2Q92833 1246 aaPredicted RBP16.75■□□□□ 0.27
SPIN3-239ENST00000640463 GRM8O00222 908 aa16.74■□□□□ 0.27
SPIN3-239ENST00000640463 MYL6BP14649 208 aa16.74■□□□□ 0.27
SPIN3-239ENST00000640463 GPATCH3Q96I76 525 aa16.74■□□□□ 0.27
SPIN3-239ENST00000640463 TCEANC2Q96MN5 208 aa16.74■□□□□ 0.27
SPIN3-239ENST00000640463 BOLA2Q9H3K6 86 aa16.74■□□□□ 0.27
SPIN3-239ENST00000640463 PTMAP06454 111 aaKnown RBP16.74■□□□□ 0.27
SPIN3-239ENST00000640463 NMIQ13287 307 aaPredicted RBP16.74■□□□□ 0.27
SPIN3-239ENST00000640463 CHD2O14647 1828 aaKnown RBP16.74■□□□□ 0.27
SPIN3-239ENST00000640463 G3BP1Q13283 466 aaKnown RBP eCLIP16.74■□□□□ 0.27
SPIN3-239ENST00000640463 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.74■□□□□ 0.27
SPIN3-239ENST00000640463 RBM8AQ9Y5S9 174 aaKnown RBP16.74■□□□□ 0.27
SPIN3-239ENST00000640463 CYP46A1Q9Y6A2 500 aa16.74■□□□□ 0.27
SPIN3-239ENST00000640463 DNM1Q05193 864 aaKnown RBP16.73■□□□□ 0.27
SPIN3-239ENST00000640463 ST3GAL1Q11201 340 aa16.73■□□□□ 0.27
SPIN3-239ENST00000640463 EVI5LQ96CN4 794 aa16.73■□□□□ 0.27
SPIN3-239ENST00000640463 VPS37CA5D8V6 355 aaPredicted RBP16.73■□□□□ 0.27
SPIN3-239ENST00000640463 PIP4K2AP48426 406 aaPredicted RBP16.73■□□□□ 0.27
SPIN3-239ENST00000640463 ME3Q16798 604 aa16.73■□□□□ 0.27
SPIN3-239ENST00000640463 ERC1Q8IUD2 1116 aa16.73■□□□□ 0.27
SPIN3-239ENST00000640463 CCDC39Q9UFE4 941 aa16.73■□□□□ 0.27
SPIN3-239ENST00000640463 CCDC171Q6TFL3 1326 aa16.72■□□□□ 0.27
SPIN3-239ENST00000640463 CRYBG1Q9Y4K1 1723 aa16.72■□□□□ 0.27
SPIN3-239ENST00000640463 ZNF500O60304 480 aaPredicted RBP16.72■□□□□ 0.27
SPIN3-239ENST00000640463 PHF14O94880 888 aa16.72■□□□□ 0.27
SPIN3-239ENST00000640463 ZC3H6P61129 1189 aaKnown RBP16.72■□□□□ 0.27
SPIN3-239ENST00000640463 NECTIN1Q15223 517 aa16.72■□□□□ 0.27
SPIN3-239ENST00000640463 RIC3Q7Z5B4 369 aa16.72■□□□□ 0.27
SPIN3-239ENST00000640463 LINS1Q8NG48 757 aa16.72■□□□□ 0.27
SPIN3-239ENST00000640463 ZSWIM6Q9HCJ5 1215 aa16.72■□□□□ 0.27
SPIN3-239ENST00000640463 TPM2P07951 284 aa16.72■□□□□ 0.27
SPIN3-239ENST00000640463 HCLS1P14317 486 aaPredicted RBP16.72■□□□□ 0.27
SPIN3-239ENST00000640463 CCDC183Q5T5S1 534 aa16.72■□□□□ 0.27
SPIN3-239ENST00000640463 VPS53Q5VIR6 699 aa16.72■□□□□ 0.27
SPIN3-239ENST00000640463 CREB3L3Q68CJ9 461 aa16.72■□□□□ 0.27
SPIN3-239ENST00000640463 TMEM87AQ8NBN3 555 aa16.72■□□□□ 0.27
SPIN3-239ENST00000640463 TAF6LQ9Y6J9 622 aa16.72■□□□□ 0.27
SPIN3-239ENST00000640463 IGKV5-2P06315 115 aa16.72■□□□□ 0.27
SPIN3-239ENST00000640463 PDIA6Q15084 440 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms