RNA–Protein interactions for RNA: ENST00000640251.1

PAX6-267, Transcript of paired box 6, human

TSL 5

Gene PAX6, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-267	ENST00000640251	FANCA	O15360	1455 aa		10.71	□□□□□ -0.69
PAX6-267	ENST00000640251	VWA5B2	Q8N398	1253 aa		10.71	□□□□□ -0.69
PAX6-267	ENST00000640251	RHBDD1	Q8TEB9	315 aa		10.71	□□□□□ -0.69
PAX6-267	ENST00000640251	NEO1	Q92859	1461 aa		10.71	□□□□□ -0.69
PAX6-267	ENST00000640251	RBM19	Q9Y4C8	960 aa	Known RBP	10.71	□□□□□ -0.69
PAX6-267	ENST00000640251	ADAMTSL3	P82987	1691 aa		10.7	□□□□□ -0.7
PAX6-267	ENST00000640251	MADD	Q8WXG6	1647 aa		10.7	□□□□□ -0.7
PAX6-267	ENST00000640251	ARID4B	Q4LE39	1312 aa	Predicted RBP	10.7	□□□□□ -0.7
PAX6-267	ENST00000640251	SFI1	A8K8P3	1242 aa		10.7	□□□□□ -0.7
PAX6-267	ENST00000640251	CRTC2	Q53ET0	693 aa	Predicted RBP	10.7	□□□□□ -0.7
PAX6-267	ENST00000640251	WDR44	Q5JSH3	913 aa		10.7	□□□□□ -0.7
PAX6-267	ENST00000640251	TNS4	Q8IZW8	715 aa		10.7	□□□□□ -0.7
PAX6-267	ENST00000640251	CCDC97	Q96F63	343 aa	Predicted RBP	10.7	□□□□□ -0.7
PAX6-267	ENST00000640251	CUEDC1	Q9NWM3	386 aa	Predicted RBP	10.7	□□□□□ -0.7
PAX6-267	ENST00000640251	DYRK1B	Q9Y463	629 aa		10.7	□□□□□ -0.7
PAX6-267	ENST00000640251	USP3	Q9Y6I4	520 aa		10.7	□□□□□ -0.7
PAX6-267	ENST00000640251	HECW1	Q76N89	1606 aa		10.69	□□□□□ -0.7
PAX6-267	ENST00000640251	PCF11	O94913	1555 aa	Known RBP	10.69	□□□□□ -0.7
PAX6-267	ENST00000640251	GMPR	P36959	345 aa		10.69	□□□□□ -0.7
PAX6-267	ENST00000640251	PLA2G4A	P47712	749 aa		10.69	□□□□□ -0.7
PAX6-267	ENST00000640251	MLEC	Q14165	292 aa		10.69	□□□□□ -0.7
PAX6-267	ENST00000640251	BCORL1	Q5H9F3	1711 aa		10.69	□□□□□ -0.7
PAX6-267	ENST00000640251	DENND4B	O75064	1496 aa	Predicted RBP	10.68	□□□□□ -0.7
PAX6-267	ENST00000640251	LOC105371045	A0A1W2PR82	267 aa		10.68	□□□□□ -0.7
PAX6-267	ENST00000640251	CDK2AP1	O14519	115 aa		10.68	□□□□□ -0.7
PAX6-267	ENST00000640251	MTFR1	Q15390	333 aa		10.68	□□□□□ -0.7
PAX6-267	ENST00000640251	TBCEL	Q5QJ74	424 aa		10.68	□□□□□ -0.7
PAX6-267	ENST00000640251	SIX5	Q8N196	739 aa		10.68	□□□□□ -0.7
PAX6-267	ENST00000640251	GPAM	Q9HCL2	828 aa		10.68	□□□□□ -0.7
PAX6-267	ENST00000640251	CABP1	Q9NZU7	370 aa		10.68	□□□□□ -0.7
PAX6-267	ENST00000640251	RIMS1	Q86UR5	1692 aa	Known RBP	10.68	□□□□□ -0.7
PAX6-267	ENST00000640251	GPR161	Q8N6U8	529 aa	Known RBP	10.67	□□□□□ -0.7
PAX6-267	ENST00000640251	AIDA	Q96BJ3	306 aa		10.67	□□□□□ -0.7
PAX6-267	ENST00000640251	NIFK	Q9BYG3	293 aa	Known RBP	10.67	□□□□□ -0.7
PAX6-267	ENST00000640251	ARHGEF40	Q8TER5	1519 aa		10.67	□□□□□ -0.7
PAX6-267	ENST00000640251	PTPRM	P28827	1452 aa		10.67	□□□□□ -0.7
PAX6-267	ENST00000640251	SCAPER	Q9BY12	1400 aa		10.67	□□□□□ -0.7
PAX6-267	ENST00000640251	USP17L15	C9J2P7	530 aa		10.66	□□□□□ -0.7
PAX6-267	ENST00000640251	USP17L10	C9JJH3	530 aa		10.66	□□□□□ -0.7
PAX6-267	ENST00000640251	USP17L13	C9JLJ4	530 aa		10.66	□□□□□ -0.7
PAX6-267	ENST00000640251	USP17L12	C9JPN9	530 aa		10.66	□□□□□ -0.7
PAX6-267	ENST00000640251	USP17L11	C9JVI0	530 aa		10.66	□□□□□ -0.7
PAX6-267	ENST00000640251	USP17L21	D6R901	530 aa		10.66	□□□□□ -0.7
PAX6-267	ENST00000640251	USP17L18	D6R9N7	530 aa		10.66	□□□□□ -0.7
PAX6-267	ENST00000640251	USP17L22	D6RA61	530 aa		10.66	□□□□□ -0.7
PAX6-267	ENST00000640251	USP17L17	D6RBQ6	530 aa		10.66	□□□□□ -0.7
PAX6-267	ENST00000640251	USP17L19	D6RCP7	530 aa		10.66	□□□□□ -0.7
PAX6-267	ENST00000640251	USP17L20	D6RJB6	530 aa		10.66	□□□□□ -0.7
PAX6-267	ENST00000640251	DKK1	O94907	266 aa		10.66	□□□□□ -0.7
PAX6-267	ENST00000640251	F11	P03951	625 aa		10.66	□□□□□ -0.7
PAX6-267	ENST00000640251	USP17L24	Q0WX57	530 aa		10.66	□□□□□ -0.7
PAX6-267	ENST00000640251	PTK7	Q13308	1070 aa		10.66	□□□□□ -0.7
PAX6-267	ENST00000640251	SV2A	Q7L0J3	742 aa		10.66	□□□□□ -0.7
PAX6-267	ENST00000640251	TSEN2	Q8NCE0	465 aa	Known RBP	10.66	□□□□□ -0.7
PAX6-267	ENST00000640251	SCHIP1	Q9P0W5	487 aa	Predicted RBP	10.66	□□□□□ -0.7
PAX6-267	ENST00000640251	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	10.66	□□□□□ -0.7
PAX6-267	ENST00000640251	PARP3	Q9Y6F1	533 aa		10.66	□□□□□ -0.7
PAX6-267	ENST00000640251	MYO5C	Q9NQX4	1742 aa		10.65	□□□□□ -0.7
PAX6-267	ENST00000640251	VSIG8	P0DPA2	414 aa		10.65	□□□□□ -0.7
PAX6-267	ENST00000640251	DPYD	Q12882	1025 aa		10.65	□□□□□ -0.7
PAX6-267	ENST00000640251	NANOS1	Q8WY41	292 aa	Known RBP	10.65	□□□□□ -0.7
PAX6-267	ENST00000640251	SERPINA10	Q9UK55	444 aa		10.65	□□□□□ -0.7
PAX6-267	ENST00000640251	PLCH2	O75038	1416 aa		10.65	□□□□□ -0.7
PAX6-267	ENST00000640251	FMN1	Q68DA7	1419 aa		10.65	□□□□□ -0.7
PAX6-267	ENST00000640251	CDC42BPB	Q9Y5S2	1711 aa		10.64	□□□□□ -0.71
PAX6-267	ENST00000640251	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	10.64	□□□□□ -0.71
PAX6-267	ENST00000640251		A0A1B0GTH6	734 aa		10.64	□□□□□ -0.71
PAX6-267	ENST00000640251	LGR5	O75473	907 aa		10.64	□□□□□ -0.71
PAX6-267	ENST00000640251	MSX1	P28360	303 aa		10.64	□□□□□ -0.71
PAX6-267	ENST00000640251	EPHA4	P54764	986 aa		10.64	□□□□□ -0.71
PAX6-267	ENST00000640251	SEC13	P55735	322 aa		10.64	□□□□□ -0.71
PAX6-267	ENST00000640251	DBN1	Q16643	649 aa		10.64	□□□□□ -0.71
PAX6-267	ENST00000640251	SLC9A9	Q8IVB4	645 aa		10.64	□□□□□ -0.71
PAX6-267	ENST00000640251	AFAP1	Q8N556	730 aa		10.64	□□□□□ -0.71
PAX6-267	ENST00000640251	C1orf115	Q9H7X2	142 aa		10.64	□□□□□ -0.71
PAX6-267	ENST00000640251	PHLDB1	Q86UU1	1377 aa		10.64	□□□□□ -0.71
PAX6-267	ENST00000640251	ZFYVE16	Q7Z3T8	1539 aa		10.63	□□□□□ -0.71
PAX6-267	ENST00000640251	FAM196B	A6NMK8	535 aa		10.63	□□□□□ -0.71
PAX6-267	ENST00000640251	ANKMY2	Q8IV38	441 aa		10.63	□□□□□ -0.71
PAX6-267	ENST00000640251	TRIM22	Q8IYM9	498 aa		10.63	□□□□□ -0.71
PAX6-267	ENST00000640251	CCDC82	Q8N4S0	544 aa		10.63	□□□□□ -0.71
PAX6-267	ENST00000640251	ZNF837	Q96EG3	531 aa	Predicted RBP	10.63	□□□□□ -0.71
PAX6-267	ENST00000640251	RUBCNL	Q9H714	662 aa		10.63	□□□□□ -0.71
PAX6-267	ENST00000640251	TIMELESS	Q9UNS1	1208 aa		10.63	□□□□□ -0.71
PAX6-267	ENST00000640251	TRO	Q12816	1431 aa	Predicted RBP	10.63	□□□□□ -0.71
PAX6-267	ENST00000640251	CFAP74	Q9C0B2	1584 aa		10.62	□□□□□ -0.71
PAX6-267	ENST00000640251	POGZ	Q7Z3K3	1410 aa		10.62	□□□□□ -0.71
PAX6-267	ENST00000640251	HSPA2	P54652	639 aa		10.62	□□□□□ -0.71
PAX6-267	ENST00000640251	FOXK2	Q01167	660 aa		10.62	□□□□□ -0.71
PAX6-267	ENST00000640251	HINFP	Q9BQA5	517 aa		10.62	□□□□□ -0.71
PAX6-267	ENST00000640251	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	10.62	□□□□□ -0.71
PAX6-267	ENST00000640251	ARHGAP5	Q13017	1502 aa		10.62	□□□□□ -0.71
PAX6-267	ENST00000640251	ARHGEF12	Q9NZN5	1544 aa		10.62	□□□□□ -0.71
PAX6-267	ENST00000640251		H7C1W4	665 aa		10.61	□□□□□ -0.71
PAX6-267	ENST00000640251	CEBPA	P49715	358 aa	Predicted RBP	10.61	□□□□□ -0.71
PAX6-267	ENST00000640251	TRIM26	Q12899	539 aa	Predicted RBP	10.61	□□□□□ -0.71
PAX6-267	ENST00000640251	ERICH6	Q7L0X2	663 aa		10.61	□□□□□ -0.71
PAX6-267	ENST00000640251	ZNF295-AS1	Q8N0V1	137 aa		10.61	□□□□□ -0.71
PAX6-267	ENST00000640251	PCGF6	Q9BYE7	350 aa		10.61	□□□□□ -0.71
PAX6-267	ENST00000640251	NUCKS1	Q9H1E3	243 aa	Known RBP	10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms