RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 MX1P20591 662 aa14.95□□□□□ -0.02
SPIN3-236ENST00000640131 ZNF710Q8N1W2 664 aa14.95□□□□□ -0.02
SPIN3-236ENST00000640131 MAP3K2Q9Y2U5 619 aa14.95□□□□□ -0.02
SPIN3-236ENST00000640131 HS1BP3Q53T59 392 aa14.94□□□□□ -0.02
SPIN3-236ENST00000640131 USP26Q9BXU7 913 aa14.94□□□□□ -0.02
SPIN3-236ENST00000640131 RAPGEF4Q8WZA2 1011 aa14.94□□□□□ -0.02
SPIN3-236ENST00000640131 ERBB3P21860 1342 aa14.94□□□□□ -0.02
SPIN3-236ENST00000640131 HSP90B1P14625 803 aaKnown RBP14.93□□□□□ -0.02
SPIN3-236ENST00000640131 FAM193AP78312 1265 aa14.93□□□□□ -0.02
SPIN3-236ENST00000640131 OS9Q13438 667 aaPredicted RBP14.93□□□□□ -0.02
SPIN3-236ENST00000640131 NFATC2IPQ8NCF5 419 aa14.93□□□□□ -0.02
SPIN3-236ENST00000640131 PA2G4Q9UQ80 394 aaKnown RBP14.93□□□□□ -0.02
SPIN3-236ENST00000640131 SOS1Q07889 1333 aaPredicted RBP14.93□□□□□ -0.02
SPIN3-236ENST00000640131 K7ELQ4 463 aaPredicted RBP14.93□□□□□ -0.02
SPIN3-236ENST00000640131 CASC1Q6TDU7 716 aa14.93□□□□□ -0.02
SPIN3-236ENST00000640131 TRIM34Q9BYJ4 488 aa14.93□□□□□ -0.02
SPIN3-236ENST00000640131 TSC1Q92574 1164 aa14.93□□□□□ -0.02
SPIN3-236ENST00000640131 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.93□□□□□ -0.02
SPIN3-236ENST00000640131 USP54Q70EL1 1684 aa14.92□□□□□ -0.02
SPIN3-236ENST00000640131 FOXD4L5Q5VV16 416 aaPredicted RBP14.92□□□□□ -0.02
SPIN3-236ENST00000640131 FOXD4L4Q8WXT5 416 aaPredicted RBP14.92□□□□□ -0.02
SPIN3-236ENST00000640131 C9orf78Q9NZ63 289 aaPredicted RBP14.92□□□□□ -0.02
SPIN3-236ENST00000640131 GIGYF1O75420 1035 aaPredicted RBP14.92□□□□□ -0.02
SPIN3-236ENST00000640131 AMOTQ4VCS5 1084 aa14.92□□□□□ -0.02
SPIN3-236ENST00000640131 BEND3Q5T5X7 828 aa14.92□□□□□ -0.02
SPIN3-236ENST00000640131 TNPO1Q92973 898 aaKnown RBP14.92□□□□□ -0.02
SPIN3-236ENST00000640131 ANO2Q9NQ90 1003 aa14.92□□□□□ -0.02
SPIN3-236ENST00000640131 ADCY9O60503 1353 aa14.91□□□□□ -0.02
SPIN3-236ENST00000640131 PATL2C9JE40 543 aaKnown RBP14.91□□□□□ -0.02
SPIN3-236ENST00000640131 MYRIPQ8NFW9 859 aa14.91□□□□□ -0.02
SPIN3-236ENST00000640131 IL25Q9H293 177 aa14.91□□□□□ -0.02
SPIN3-236ENST00000640131 CACNA1FO60840 1977 aa14.91□□□□□ -0.02
SPIN3-236ENST00000640131 SSFA2P28290 1259 aa14.91□□□□□ -0.02
SPIN3-236ENST00000640131 IBTKQ9P2D0 1353 aaPredicted RBP14.91□□□□□ -0.02
SPIN3-236ENST00000640131 SNX21Q969T3 373 aa14.9□□□□□ -0.02
SPIN3-236ENST00000640131 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.9□□□□□ -0.02
SPIN3-236ENST00000640131 CHAMP1Q96JM3 812 aa14.9□□□□□ -0.02
SPIN3-236ENST00000640131 ERC2O15083 957 aa14.89□□□□□ -0.03
SPIN3-236ENST00000640131 DTNBO60941 627 aa14.89□□□□□ -0.03
SPIN3-236ENST00000640131 TIGD1Q96MW7 591 aa14.89□□□□□ -0.03
SPIN3-236ENST00000640131 SIL1Q9H173 461 aa14.89□□□□□ -0.03
SPIN3-236ENST00000640131 DBF4Q9UBU7 674 aaPredicted RBP14.89□□□□□ -0.03
SPIN3-236ENST00000640131 PKP1Q13835 747 aa14.89□□□□□ -0.03
SPIN3-236ENST00000640131 KLHDC4Q8TBB5 520 aa14.89□□□□□ -0.03
SPIN3-236ENST00000640131 ZNF622Q969S3 477 aaKnown RBP eCLIP14.89□□□□□ -0.03
SPIN3-236ENST00000640131 PALD1Q9ULE6 856 aa14.89□□□□□ -0.03
SPIN3-236ENST00000640131 ZKSCAN5Q9Y2L8 839 aa14.89□□□□□ -0.03
SPIN3-236ENST00000640131 STRCP1A6NGW2 1772 aa14.89□□□□□ -0.03
SPIN3-236ENST00000640131 MED1Q15648 1581 aaPredicted RBP14.89□□□□□ -0.03
SPIN3-236ENST00000640131 KAT6BQ8WYB5 2073 aa14.89□□□□□ -0.03
SPIN3-236ENST00000640131 CCDC66A2RUB6 948 aa14.89□□□□□ -0.03
SPIN3-236ENST00000640131 AXDND1Q5T1B0 1012 aaPredicted RBP14.89□□□□□ -0.03
SPIN3-236ENST00000640131 KDM3BQ7LBC6 1761 aa14.89□□□□□ -0.03
SPIN3-236ENST00000640131 TRPM3Q9HCF6 1732 aaPredicted RBP14.88□□□□□ -0.03
SPIN3-236ENST00000640131 ZGPATQ8N5A5 531 aaKnown RBP14.88□□□□□ -0.03
SPIN3-236ENST00000640131 RHPN1Q8TCX5 695 aa14.88□□□□□ -0.03
SPIN3-236ENST00000640131 TATP17735 454 aaPredicted RBP14.88□□□□□ -0.03
SPIN3-236ENST00000640131 SSH3Q8TE77 659 aa14.87□□□□□ -0.03
SPIN3-236ENST00000640131 BABAM1Q9NWV8 329 aa14.87□□□□□ -0.03
SPIN3-236ENST00000640131 GEMIN8Q9NWZ8 242 aaKnown RBP14.87□□□□□ -0.03
SPIN3-236ENST00000640131 SLIT3O75094 1523 aa14.87□□□□□ -0.03
SPIN3-236ENST00000640131 MEGF6O75095 1541 aa14.87□□□□□ -0.03
SPIN3-236ENST00000640131 PTMSP20962 102 aa14.87□□□□□ -0.03
SPIN3-236ENST00000640131 ZNF496Q96IT1 587 aaPredicted RBP14.87□□□□□ -0.03
SPIN3-236ENST00000640131 UPF3BQ9BZI7 483 aaKnown RBP14.87□□□□□ -0.03
SPIN3-236ENST00000640131 LMO7Q8WWI1 1683 aa14.87□□□□□ -0.03
SPIN3-236ENST00000640131 MST1RQ04912 1400 aa14.87□□□□□ -0.03
SPIN3-236ENST00000640131 SALL3Q9BXA9 1300 aa14.87□□□□□ -0.03
SPIN3-236ENST00000640131 REC8O95072 547 aa14.86□□□□□ -0.03
SPIN3-236ENST00000640131 CAPN2P17655 700 aa14.86□□□□□ -0.03
SPIN3-236ENST00000640131 RIC3Q7Z5B4 369 aa14.86□□□□□ -0.03
SPIN3-236ENST00000640131 LARP6Q9BRS8 491 aaKnown RBP14.86□□□□□ -0.03
SPIN3-236ENST00000640131 YY1AP1Q9H869 796 aa14.86□□□□□ -0.03
SPIN3-236ENST00000640131 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.86□□□□□ -0.03
SPIN3-236ENST00000640131 NEK4P51957 841 aa14.86□□□□□ -0.03
SPIN3-236ENST00000640131 RABEP1Q15276 862 aa14.86□□□□□ -0.03
SPIN3-236ENST00000640131 SKOR2Q2VWA4 1001 aaPredicted RBP14.86□□□□□ -0.03
SPIN3-236ENST00000640131 ZNF790Q6PG37 636 aa14.86□□□□□ -0.03
SPIN3-236ENST00000640131 ESYT1Q9BSJ8 1104 aa14.86□□□□□ -0.03
SPIN3-236ENST00000640131 CCDC9Q9Y3X0 531 aaKnown RBP14.86□□□□□ -0.03
SPIN3-236ENST00000640131 USP16Q9Y5T5 823 aa14.86□□□□□ -0.03
SPIN3-236ENST00000640131 NPHP3Q7Z494 1330 aa14.86□□□□□ -0.03
SPIN3-236ENST00000640131 CHMLP26374 656 aa14.86□□□□□ -0.03
SPIN3-236ENST00000640131 CYP27B1O15528 508 aa14.85□□□□□ -0.03
SPIN3-236ENST00000640131 PHKG2P15735 406 aa14.85□□□□□ -0.03
SPIN3-236ENST00000640131 MCM5P33992 734 aa14.85□□□□□ -0.03
SPIN3-236ENST00000640131 DDIT3P35638 169 aa14.85□□□□□ -0.03
SPIN3-236ENST00000640131 PDCL2Q8N4E4 241 aa14.85□□□□□ -0.03
SPIN3-236ENST00000640131 STRN4Q9NRL3 753 aa14.85□□□□□ -0.03
SPIN3-236ENST00000640131 FOXD4L6Q3SYB3 417 aaPredicted RBP14.85□□□□□ -0.03
SPIN3-236ENST00000640131 FOXD4L3Q6VB84 417 aaPredicted RBP14.85□□□□□ -0.03
SPIN3-236ENST00000640131 XAGE3Q8WTP9 111 aa14.85□□□□□ -0.03
SPIN3-236ENST00000640131 SUCLG2Q96I99 432 aa14.85□□□□□ -0.03
SPIN3-236ENST00000640131 OSBPL3Q9H4L5 887 aa14.85□□□□□ -0.03
SPIN3-236ENST00000640131 KDM6AO15550 1401 aaPredicted RBP14.84□□□□□ -0.03
SPIN3-236ENST00000640131 NCOA3Q9Y6Q9 1424 aa14.84□□□□□ -0.03
SPIN3-236ENST00000640131 KSR2Q6VAB6 950 aa14.84□□□□□ -0.03
SPIN3-236ENST00000640131 KIF3AQ9Y496 699 aa14.84□□□□□ -0.03
SPIN3-236ENST00000640131 ATP5J2-PTCD1G3V325 749 aa14.84□□□□□ -0.03
SPIN3-236ENST00000640131 PTCD1O75127 700 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms