RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-222ENST00000640072 CTNNA3Q9UI47 895 aa7.18□□□□□ -1.26
NECAP1-222ENST00000640072 N6AMT1Q9Y5N5 214 aa7.18□□□□□ -1.26
NECAP1-222ENST00000640072 GJA3Q9Y6H8 435 aa7.18□□□□□ -1.26
NECAP1-222ENST00000640072 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.18□□□□□ -1.26
NECAP1-222ENST00000640072 SCINQ9Y6U3 715 aa7.18□□□□□ -1.26
NECAP1-222ENST00000640072 MYO1BO43795 1136 aa7.18□□□□□ -1.26
NECAP1-222ENST00000640072 REC8O95072 547 aa7.18□□□□□ -1.26
NECAP1-222ENST00000640072 MYCLP1P12525 358 aaPredicted RBP7.18□□□□□ -1.26
NECAP1-222ENST00000640072 ALDH1L2Q3SY69 923 aa7.18□□□□□ -1.26
NECAP1-222ENST00000640072 KANK3Q6NY19 840 aa7.18□□□□□ -1.26
NECAP1-222ENST00000640072 DNAAF4Q8WXU2 420 aa7.18□□□□□ -1.26
NECAP1-222ENST00000640072 NACA2Q9H009 215 aa7.18□□□□□ -1.26
NECAP1-222ENST00000640072 MORC2Q9Y6X9 1032 aaPredicted RBP7.18□□□□□ -1.26
NECAP1-222ENST00000640072 TNIKQ9UKE5 1360 aa7.18□□□□□ -1.26
NECAP1-222ENST00000640072 WDR97A6NE52 1622 aa7.17□□□□□ -1.26
NECAP1-222ENST00000640072 FAM163BP0C2L3 166 aa7.17□□□□□ -1.26
NECAP1-222ENST00000640072 IRX1P78414 480 aaPredicted RBP7.17□□□□□ -1.26
NECAP1-222ENST00000640072 DHX8Q14562 1220 aaKnown RBP7.17□□□□□ -1.26
NECAP1-222ENST00000640072 TSNAXIP1Q2TAA8 658 aa7.17□□□□□ -1.26
NECAP1-222ENST00000640072 C20orf194Q5TEA3 1177 aa7.17□□□□□ -1.26
NECAP1-222ENST00000640072 MCTP2Q6DN12 878 aa7.17□□□□□ -1.26
NECAP1-222ENST00000640072 CATIPQ7Z7H3 387 aa7.17□□□□□ -1.26
NECAP1-222ENST00000640072 NDUFAF2Q8N183 169 aa7.17□□□□□ -1.26
NECAP1-222ENST00000640072 FLCNQ8NFG4 579 aa7.17□□□□□ -1.26
NECAP1-222ENST00000640072 GIPC2Q8TF65 315 aa7.17□□□□□ -1.26
NECAP1-222ENST00000640072 TBC1D22AQ8WUA7 517 aa7.17□□□□□ -1.26
NECAP1-222ENST00000640072 BICD1Q96G01 975 aa7.17□□□□□ -1.26
NECAP1-222ENST00000640072 DDX27Q96GQ7 796 aaKnown RBP7.17□□□□□ -1.26
NECAP1-222ENST00000640072 FAM81BQ96LP2 452 aa7.17□□□□□ -1.26
NECAP1-222ENST00000640072 LNPKQ9C0E8 428 aa7.17□□□□□ -1.26
NECAP1-222ENST00000640072 PICK1Q9NRD5 415 aa7.17□□□□□ -1.26
NECAP1-222ENST00000640072 UBAP1Q9NZ09 502 aa7.17□□□□□ -1.26
NECAP1-222ENST00000640072 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.17□□□□□ -1.26
NECAP1-222ENST00000640072 PCDHGA4Q9Y5G9 962 aa7.17□□□□□ -1.26
NECAP1-222ENST00000640072 ELL2O00472 640 aaPredicted RBP7.17□□□□□ -1.26
NECAP1-222ENST00000640072 ONECUT3O60422 494 aaPredicted RBP7.17□□□□□ -1.26
NECAP1-222ENST00000640072 KRT38O76015 456 aa7.17□□□□□ -1.26
NECAP1-222ENST00000640072 STIP1P31948 543 aaKnown RBP7.17□□□□□ -1.26
NECAP1-222ENST00000640072 PPP2R5BQ15173 497 aa7.17□□□□□ -1.26
NECAP1-222ENST00000640072 TTC39BQ5VTQ0 682 aaPredicted RBP7.17□□□□□ -1.26
NECAP1-222ENST00000640072 SUGP1Q8IWZ8 645 aaKnown RBP7.17□□□□□ -1.26
NECAP1-222ENST00000640072 PIBF1Q8WXW3 757 aa7.17□□□□□ -1.26
NECAP1-222ENST00000640072 AS3MTQ9HBK9 375 aa7.17□□□□□ -1.26
NECAP1-222ENST00000640072 GIGYF1O75420 1035 aaPredicted RBP7.17□□□□□ -1.26
NECAP1-222ENST00000640072 USP8P40818 1118 aa7.17□□□□□ -1.26
NECAP1-222ENST00000640072 TPM4P67936 248 aa7.17□□□□□ -1.26
NECAP1-222ENST00000640072 MSL1Q68DK7 614 aa7.17□□□□□ -1.26
NECAP1-222ENST00000640072 DZIP1Q86YF9 867 aaKnown RBP7.17□□□□□ -1.26
NECAP1-222ENST00000640072 NEK11Q8NG66 645 aa7.17□□□□□ -1.26
NECAP1-222ENST00000640072 ANKRD7Q92527 254 aa7.17□□□□□ -1.26
NECAP1-222ENST00000640072 KCNB2Q92953 911 aa7.17□□□□□ -1.26
NECAP1-222ENST00000640072 BHMTQ93088 406 aa7.17□□□□□ -1.26
NECAP1-222ENST00000640072 UIMC1Q96RL1 719 aa7.17□□□□□ -1.26
NECAP1-222ENST00000640072 LRRFIP2Q9Y608 721 aaKnown RBP7.17□□□□□ -1.26
NECAP1-222ENST00000640072 CDKL5O76039 1030 aa7.16□□□□□ -1.26
NECAP1-222ENST00000640072 S100BP04271 92 aaPredicted RBP7.16□□□□□ -1.26
NECAP1-222ENST00000640072 ZNF16P17020 682 aaPredicted RBP7.16□□□□□ -1.26
NECAP1-222ENST00000640072 CYP2C19P33261 490 aa7.16□□□□□ -1.26
NECAP1-222ENST00000640072 RABEP1Q15276 862 aa7.16□□□□□ -1.26
NECAP1-222ENST00000640072 ALKBH2Q6NS38 261 aa7.16□□□□□ -1.26
NECAP1-222ENST00000640072 ARHGEF25Q86VW2 580 aa7.16□□□□□ -1.26
NECAP1-222ENST00000640072 PMFBP1Q8TBY8 1022 aa7.16□□□□□ -1.26
NECAP1-222ENST00000640072 TBC1D31Q96DN5 1066 aa7.16□□□□□ -1.26
NECAP1-222ENST00000640072 IL17RAQ96F46 866 aa7.16□□□□□ -1.26
NECAP1-222ENST00000640072 YIPF2Q9BWQ6 316 aa7.16□□□□□ -1.26
NECAP1-222ENST00000640072 SPC25Q9HBM1 224 aa7.16□□□□□ -1.26
NECAP1-222ENST00000640072 RFX1P22670 979 aa7.16□□□□□ -1.26
NECAP1-222ENST00000640072 COL19A1Q14993 1142 aa7.16□□□□□ -1.26
NECAP1-222ENST00000640072 AKNAD1Q5T1N1 836 aa7.16□□□□□ -1.26
NECAP1-222ENST00000640072 NT5DC4Q86YG4 428 aa7.16□□□□□ -1.26
NECAP1-222ENST00000640072 ZNF512BQ96KM6 892 aaPredicted RBP7.16□□□□□ -1.26
NECAP1-222ENST00000640072 ATAD2BQ9ULI0 1458 aa7.16□□□□□ -1.26
NECAP1-222ENST00000640072 POLR3GO15318 223 aaPredicted RBP7.15□□□□□ -1.26
NECAP1-222ENST00000640072 MTA2O94776 668 aa7.15□□□□□ -1.26
NECAP1-222ENST00000640072 ZBED6P86452 979 aa7.15□□□□□ -1.26
NECAP1-222ENST00000640072 DBN1Q16643 649 aa7.15□□□□□ -1.26
NECAP1-222ENST00000640072 HHATQ5VTY9 493 aa7.15□□□□□ -1.26
NECAP1-222ENST00000640072 WDR75Q8IWA0 830 aaKnown RBP7.15□□□□□ -1.26
NECAP1-222ENST00000640072 JDP2Q8WYK2 163 aa7.15□□□□□ -1.26
NECAP1-222ENST00000640072 SYAP1Q96A49 352 aaPredicted RBP7.15□□□□□ -1.26
NECAP1-222ENST00000640072 THOC1Q96FV9 657 aaKnown RBP7.15□□□□□ -1.26
NECAP1-222ENST00000640072 BOLA2-SMG1P6H3BVE0 249 aa7.15□□□□□ -1.26
NECAP1-222ENST00000640072 SEMA3EO15041 775 aa7.15□□□□□ -1.26
NECAP1-222ENST00000640072 LDHAP00338 332 aaKnown RBP7.15□□□□□ -1.26
NECAP1-222ENST00000640072 PDAP1Q13442 181 aaKnown RBP7.15□□□□□ -1.26
NECAP1-222ENST00000640072 NKX1-1Q15270 411 aaPredicted RBP7.15□□□□□ -1.26
NECAP1-222ENST00000640072 ZRSR1Q15695 479 aaKnown RBP7.15□□□□□ -1.26
NECAP1-222ENST00000640072 KIF18AQ8NI77 898 aa7.15□□□□□ -1.26
NECAP1-222ENST00000640072 PDLIM2Q96JY6 352 aa7.15□□□□□ -1.26
NECAP1-222ENST00000640072 AK7Q96M32 723 aa7.15□□□□□ -1.26
NECAP1-222ENST00000640072 CENPOQ9BU64 300 aa7.15□□□□□ -1.26
NECAP1-222ENST00000640072 RBSNQ9H1K0 784 aa7.15□□□□□ -1.26
NECAP1-222ENST00000640072 POLKQ9UBT6 870 aa7.15□□□□□ -1.26
NECAP1-222ENST00000640072 BLOC1S6Q9UL45 172 aa7.15□□□□□ -1.26
NECAP1-222ENST00000640072 RRP15Q9Y3B9 282 aaKnown RBP7.15□□□□□ -1.26
NECAP1-222ENST00000640072 ANKRD33BA6NCL7 494 aa7.15□□□□□ -1.27
NECAP1-222ENST00000640072 ZMYND10O75800 440 aa7.15□□□□□ -1.27
NECAP1-222ENST00000640072 MYBL2P10244 700 aa7.15□□□□□ -1.27
NECAP1-222ENST00000640072 RDXP35241 583 aaKnown RBP7.15□□□□□ -1.27
NECAP1-222ENST00000640072 EIF4G2P78344 907 aaKnown RBP eCLIP7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms