RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 NBPF15Q8N660 670 aa22.39■■□□□ 1.17
SMN2-216ENST00000638794 MIS18AQ9NYP9 233 aa22.39■■□□□ 1.17
SMN2-216ENST00000638794 ARFGEF2Q9Y6D5 1785 aa22.38■■□□□ 1.17
SMN2-216ENST00000638794 WDR90Q96KV7 1748 aa22.38■■□□□ 1.17
SMN2-216ENST00000638794 NEFMP07197 916 aa22.38■■□□□ 1.17
SMN2-216ENST00000638794 CLEC4GQ6UXB4 293 aa22.38■■□□□ 1.17
SMN2-216ENST00000638794 SLX4Q8IY92 1834 aa22.38■■□□□ 1.17
SMN2-216ENST00000638794 C21orf2O43822 256 aa22.37■■□□□ 1.17
SMN2-216ENST00000638794 PLEKHF1Q96S99 279 aa22.37■■□□□ 1.17
SMN2-216ENST00000638794 ZNF219Q9P2Y4 722 aaPredicted RBP22.37■■□□□ 1.17
SMN2-216ENST00000638794 ZNF652Q9Y2D9 606 aa22.37■■□□□ 1.17
SMN2-216ENST00000638794 DICER1Q9UPY3 1922 aaKnown RBP22.37■■□□□ 1.17
SMN2-216ENST00000638794 NBPF5PQ86XG9 351 aaPredicted RBP22.35■■□□□ 1.17
SMN2-216ENST00000638794 GLTPD2A6NH11 291 aa22.34■■□□□ 1.17
SMN2-216ENST00000638794 SRGNP10124 158 aa22.34■■□□□ 1.17
SMN2-216ENST00000638794 FSTL1Q12841 308 aa22.34■■□□□ 1.17
SMN2-216ENST00000638794 NFE2L2Q16236 605 aa22.34■■□□□ 1.17
SMN2-216ENST00000638794 CNKSR1Q969H4 720 aa22.34■■□□□ 1.17
SMN2-216ENST00000638794 STYK1Q6J9G0 422 aa22.33■■□□□ 1.17
SMN2-216ENST00000638794 MASTLQ96GX5 879 aa22.33■■□□□ 1.17
SMN2-216ENST00000638794 THUMPD2Q9BTF0 503 aaKnown RBP22.33■■□□□ 1.17
SMN2-216ENST00000638794 RGL2O15211 777 aa22.32■■□□□ 1.16
SMN2-216ENST00000638794 PRPF40BQ6NWY9 871 aaKnown RBP22.32■■□□□ 1.16
SMN2-216ENST00000638794 DNAJC5GQ8N7S2 189 aa22.32■■□□□ 1.16
SMN2-216ENST00000638794 PNISRQ8TF01 805 aaKnown RBP22.32■■□□□ 1.16
SMN2-216ENST00000638794 NIP7Q9Y221 180 aaKnown RBP eCLIP22.32■■□□□ 1.16
SMN2-216ENST00000638794 MAPK8IP3Q9UPT6 1336 aa22.31■■□□□ 1.16
SMN2-216ENST00000638794 NUP98P52948 1817 aa22.3■■□□□ 1.16
SMN2-216ENST00000638794 HLFQ16534 295 aa22.3■■□□□ 1.16
SMN2-216ENST00000638794 TAOK3Q9H2K8 898 aa22.3■■□□□ 1.16
SMN2-216ENST00000638794 LTBP3Q9NS15 1303 aa22.3■■□□□ 1.16
SMN2-216ENST00000638794 VEGFAP15692 232 aaPredicted RBP22.29■■□□□ 1.16
SMN2-216ENST00000638794 EIF4A1P60842 406 aaKnown RBP22.29■■□□□ 1.16
SMN2-216ENST00000638794 ERFEQ4G0M1 354 aa22.29■■□□□ 1.16
SMN2-216ENST00000638794 TPTE2Q6XPS3 522 aa22.29■■□□□ 1.16
SMN2-216ENST00000638794 PNNQ9H307 717 aaKnown RBP22.29■■□□□ 1.16
SMN2-216ENST00000638794 FAM177BA6PVY3 158 aa22.28■■□□□ 1.16
SMN2-216ENST00000638794 HTRA3P83110 453 aa22.28■■□□□ 1.16
SMN2-216ENST00000638794 SMC1BQ8NDV3 1235 aa22.28■■□□□ 1.16
SMN2-216ENST00000638794 KLRG2A4D1S0 409 aaPredicted RBP22.27■■□□□ 1.16
SMN2-216ENST00000638794 SOGA3Q5TF21 947 aa22.27■■□□□ 1.16
SMN2-216ENST00000638794 NGEFQ8N5V2 710 aa22.27■■□□□ 1.16
SMN2-216ENST00000638794 PCNTO95613 3336 aa22.26■■□□□ 1.15
SMN2-216ENST00000638794 NPR1P16066 1061 aa22.26■■□□□ 1.15
SMN2-216ENST00000638794 RRP7AQ9Y3A4 280 aaKnown RBP22.26■■□□□ 1.15
SMN2-216ENST00000638794 POTECB2RU33 542 aa22.25■■□□□ 1.15
SMN2-216ENST00000638794 RALBP1Q15311 655 aa22.25■■□□□ 1.15
SMN2-216ENST00000638794 DPY19L2Q6NUT2 758 aa22.25■■□□□ 1.15
SMN2-216ENST00000638794 C7orf43Q8WVR3 580 aa22.25■■□□□ 1.15
SMN2-216ENST00000638794 TTLL7Q6ZT98 887 aa22.24■■□□□ 1.15
SMN2-216ENST00000638794 MAP3K15Q6ZN16 1313 aa22.24■■□□□ 1.15
SMN2-216ENST00000638794 ERVV-1B6SEH8 477 aa22.23■■□□□ 1.15
SMN2-216ENST00000638794 MYL6BP14649 208 aa22.23■■□□□ 1.15
SMN2-216ENST00000638794 CCDC93Q567U6 631 aa22.23■■□□□ 1.15
SMN2-216ENST00000638794 KIF6Q6ZMV9 814 aa22.23■■□□□ 1.15
SMN2-216ENST00000638794 GTF2E1P29083 439 aaPredicted RBP22.22■■□□□ 1.15
SMN2-216ENST00000638794 TSPYL4Q9UJ04 414 aa22.22■■□□□ 1.15
SMN2-216ENST00000638794 ABCC12Q96J65 1359 aa22.22■■□□□ 1.15
SMN2-216ENST00000638794 RIPK4P57078 832 aa22.21■■□□□ 1.15
SMN2-216ENST00000638794 IFFO2Q5TF58 517 aa22.21■■□□□ 1.15
SMN2-216ENST00000638794 OLFM4Q6UX06 510 aa22.21■■□□□ 1.15
SMN2-216ENST00000638794 KLRG1Q96E93 195 aa22.21■■□□□ 1.15
SMN2-216ENST00000638794 NUTM1Q86Y26 1132 aa22.2■■□□□ 1.14
SMN2-216ENST00000638794 NYXQ9GZU5 481 aa22.2■■□□□ 1.14
SMN2-216ENST00000638794 ZBTB3Q9H5J0 574 aa22.2■■□□□ 1.14
SMN2-216ENST00000638794 DDNO94850 711 aaPredicted RBP22.19■■□□□ 1.14
SMN2-216ENST00000638794 DDX10Q13206 875 aaKnown RBP22.19■■□□□ 1.14
SMN2-216ENST00000638794 ERBB4Q15303 1308 aa22.19■■□□□ 1.14
SMN2-216ENST00000638794 UBN2Q6ZU65 1347 aa22.19■■□□□ 1.14
SMN2-216ENST00000638794 GPTP24298 496 aa22.18■■□□□ 1.14
SMN2-216ENST00000638794 ALDH1B1P30837 517 aa22.18■■□□□ 1.14
SMN2-216ENST00000638794 FKBP4Q02790 459 aaKnown RBP eCLIP22.18■■□□□ 1.14
SMN2-216ENST00000638794 IBTKQ9P2D0 1353 aaPredicted RBP22.17■■□□□ 1.14
SMN2-216ENST00000638794 MYBBP1AQ9BQG0 1328 aaKnown RBP22.17■■□□□ 1.14
SMN2-216ENST00000638794 TMPOP42166 694 aaKnown RBP22.17■■□□□ 1.14
SMN2-216ENST00000638794 CRY2Q49AN0 593 aa22.17■■□□□ 1.14
SMN2-216ENST00000638794 ZNF277Q9NRM2 450 aaPredicted RBP22.17■■□□□ 1.14
SMN2-216ENST00000638794 RTKN2Q8IZC4 609 aa22.16■■□□□ 1.14
SMN2-216ENST00000638794 RIC1Q4ADV7 1423 aa22.15■■□□□ 1.14
SMN2-216ENST00000638794 SCN4AP35499 1836 aa22.15■■□□□ 1.14
SMN2-216ENST00000638794 EIF2S2P20042 333 aaKnown RBP22.15■■□□□ 1.14
SMN2-216ENST00000638794 LMOD3Q0VAK6 560 aa22.15■■□□□ 1.14
SMN2-216ENST00000638794 SUSD4Q5VX71 490 aa22.15■■□□□ 1.14
SMN2-216ENST00000638794 LRP10Q7Z4F1 713 aa22.15■■□□□ 1.14
SMN2-216ENST00000638794 ZNF34Q8IZ26 560 aa22.15■■□□□ 1.14
SMN2-216ENST00000638794 JMYQ8N9B5 988 aa22.15■■□□□ 1.14
SMN2-216ENST00000638794 BABAM1Q9NWV8 329 aa22.15■■□□□ 1.14
SMN2-216ENST00000638794 SNED1Q8TER0 1413 aa22.14■■□□□ 1.14
SMN2-216ENST00000638794 PDIA6Q15084 440 aa22.14■■□□□ 1.13
SMN2-216ENST00000638794 GIGYF2Q6Y7W6 1299 aaKnown RBP22.14■■□□□ 1.13
SMN2-216ENST00000638794 CCDC146Q8IYE0 955 aa22.14■■□□□ 1.13
SMN2-216ENST00000638794 NTSR2O95665 410 aa22.13■■□□□ 1.13
SMN2-216ENST00000638794 POTEIP0CG38 1075 aa22.13■■□□□ 1.13
SMN2-216ENST00000638794 POTEJP0CG39 1038 aa22.13■■□□□ 1.13
SMN2-216ENST00000638794 PROSER3Q2NL68 480 aa22.13■■□□□ 1.13
SMN2-216ENST00000638794 ANKRD36CQ5JPF3 1778 aa22.12■■□□□ 1.13
SMN2-216ENST00000638794 ZNF541Q9H0D2 1346 aa22.12■■□□□ 1.13
SMN2-216ENST00000638794 ANXA1P04083 346 aa22.12■■□□□ 1.13
SMN2-216ENST00000638794 NEUROD2Q15784 382 aa22.12■■□□□ 1.13
SMN2-216ENST00000638794 RPGRQ92834 1020 aaKnown RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms