RNA–Protein interactions for RNA: ENST00000638334.1

NECAP1-211, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-211ENST00000638334 NPHP3Q7Z494 1330 aa12.39□□□□□ -0.43
NECAP1-211ENST00000638334 RGPD2P0DJD1 1756 aa12.39□□□□□ -0.43
NECAP1-211ENST00000638334 IFIT2P09913 472 aaKnown RBP12.39□□□□□ -0.43
NECAP1-211ENST00000638334 OS9Q13438 667 aaPredicted RBP12.39□□□□□ -0.43
NECAP1-211ENST00000638334 VPS53Q5VIR6 699 aa12.39□□□□□ -0.43
NECAP1-211ENST00000638334 MPRIPQ6WCQ1 1025 aa12.39□□□□□ -0.43
NECAP1-211ENST00000638334 PROSER2Q86WR7 435 aaPredicted RBP12.39□□□□□ -0.43
NECAP1-211ENST00000638334 NECTIN2Q92692 538 aa12.39□□□□□ -0.43
NECAP1-211ENST00000638334 DCAF5Q96JK2 942 aa12.39□□□□□ -0.43
NECAP1-211ENST00000638334 LSG1Q9H089 658 aaKnown RBP12.39□□□□□ -0.43
NECAP1-211ENST00000638334 SLC52A2Q9HAB3 445 aa12.39□□□□□ -0.43
NECAP1-211ENST00000638334 DIAPH3Q9NSV4 1193 aa12.39□□□□□ -0.43
NECAP1-211ENST00000638334 LIMCH1Q9UPQ0 1083 aa12.39□□□□□ -0.43
NECAP1-211ENST00000638334 PKD1L3Q7Z443 1732 aa12.38□□□□□ -0.43
NECAP1-211ENST00000638334 ZKSCAN1P17029 563 aaPredicted RBP12.38□□□□□ -0.43
NECAP1-211ENST00000638334 TRHP20396 242 aaPredicted RBP12.38□□□□□ -0.43
NECAP1-211ENST00000638334 PSMA5P28066 241 aa12.38□□□□□ -0.43
NECAP1-211ENST00000638334 MCM5P33992 734 aa12.38□□□□□ -0.43
NECAP1-211ENST00000638334 G3BP1Q13283 466 aaKnown RBP eCLIP12.38□□□□□ -0.43
NECAP1-211ENST00000638334 ANKRD1Q15327 319 aa12.38□□□□□ -0.43
NECAP1-211ENST00000638334 ZSCAN23Q3MJ62 389 aa12.38□□□□□ -0.43
NECAP1-211ENST00000638334 RNF20Q5VTR2 975 aa12.38□□□□□ -0.43
NECAP1-211ENST00000638334 ZNF790Q6PG37 636 aa12.38□□□□□ -0.43
NECAP1-211ENST00000638334 IFNL2Q8IZJ0 200 aa12.38□□□□□ -0.43
NECAP1-211ENST00000638334 FAM184AQ8NB25 1140 aa12.38□□□□□ -0.43
NECAP1-211ENST00000638334 TTC14Q96N46 770 aa12.38□□□□□ -0.43
NECAP1-211ENST00000638334 HMG20BQ9P0W2 317 aa12.38□□□□□ -0.43
NECAP1-211ENST00000638334 ZDHHC9Q9Y397 364 aa12.38□□□□□ -0.43
NECAP1-211ENST00000638334 ESPNB1AK53 854 aa12.37□□□□□ -0.43
NECAP1-211ENST00000638334 SNRPA1P09661 255 aaKnown RBP12.37□□□□□ -0.43
NECAP1-211ENST00000638334 ATF3P18847 181 aa12.37□□□□□ -0.43
NECAP1-211ENST00000638334 LRSAM1Q6UWE0 723 aa12.37□□□□□ -0.43
NECAP1-211ENST00000638334 CADPS2Q86UW7 1296 aa12.37□□□□□ -0.43
NECAP1-211ENST00000638334 ZGPATQ8N5A5 531 aaKnown RBP12.37□□□□□ -0.43
NECAP1-211ENST00000638334 LRRC59Q96AG4 307 aaKnown RBP12.37□□□□□ -0.43
NECAP1-211ENST00000638334 CHMP4CQ96CF2 233 aa12.37□□□□□ -0.43
NECAP1-211ENST00000638334 IL1RAPL2Q9NP60 686 aa12.37□□□□□ -0.43
NECAP1-211ENST00000638334 FOXD4L1Q9NU39 408 aa12.37□□□□□ -0.43
NECAP1-211ENST00000638334 TMEM94Q12767 1356 aa12.37□□□□□ -0.43
NECAP1-211ENST00000638334 COL18A1P39060 1754 aa12.37□□□□□ -0.43
NECAP1-211ENST00000638334 TSGA10IPQ3SY00 556 aa12.36□□□□□ -0.43
NECAP1-211ENST00000638334 ORAI2Q96SN7 254 aa12.36□□□□□ -0.43
NECAP1-211ENST00000638334 METTL22Q9BUU2 404 aaPredicted RBP12.36□□□□□ -0.43
NECAP1-211ENST00000638334 ZSWIM6Q9HCJ5 1215 aa12.36□□□□□ -0.43
NECAP1-211ENST00000638334 COPRSQ9NQ92 184 aa12.36□□□□□ -0.43
NECAP1-211ENST00000638334 SNX14Q9Y5W7 946 aa12.36□□□□□ -0.43
NECAP1-211ENST00000638334 TNS3Q68CZ2 1445 aa12.36□□□□□ -0.43
NECAP1-211ENST00000638334 PHKG2P15735 406 aa12.35□□□□□ -0.43
NECAP1-211ENST00000638334 PDCP20941 246 aa12.35□□□□□ -0.43
NECAP1-211ENST00000638334 KRT32Q14532 448 aa12.35□□□□□ -0.43
NECAP1-211ENST00000638334 UVSSAQ2YD98 709 aa12.35□□□□□ -0.43
NECAP1-211ENST00000638334 GAS2L3Q86XJ1 694 aa12.35□□□□□ -0.43
NECAP1-211ENST00000638334 NUTM1Q86Y26 1132 aa12.35□□□□□ -0.43
NECAP1-211ENST00000638334 UNC5CLQ8IV45 518 aa12.35□□□□□ -0.43
NECAP1-211ENST00000638334 FMNL2Q96PY5 1086 aa12.35□□□□□ -0.43
NECAP1-211ENST00000638334 PALD1Q9ULE6 856 aa12.35□□□□□ -0.43
NECAP1-211ENST00000638334 JCADQ9P266 1359 aa12.34□□□□□ -0.43
NECAP1-211ENST00000638334 LAMB4A4D0S4 1761 aa12.34□□□□□ -0.43
NECAP1-211ENST00000638334 KCNQ3O43525 872 aa12.34□□□□□ -0.43
NECAP1-211ENST00000638334 PRPF40AO75400 957 aaKnown RBP12.34□□□□□ -0.43
NECAP1-211ENST00000638334 TERF1P54274 439 aa12.34□□□□□ -0.43
NECAP1-211ENST00000638334 PDIA6Q15084 440 aa12.34□□□□□ -0.43
NECAP1-211ENST00000638334 RABL6Q3YEC7 729 aaPredicted RBP12.34□□□□□ -0.43
NECAP1-211ENST00000638334 CAVIN1Q6NZI2 390 aaKnown RBP12.34□□□□□ -0.43
NECAP1-211ENST00000638334 RIC3Q7Z5B4 369 aa12.34□□□□□ -0.43
NECAP1-211ENST00000638334 PDLIM2Q96JY6 352 aa12.34□□□□□ -0.43
NECAP1-211ENST00000638334 PANK2Q9BZ23 570 aa12.34□□□□□ -0.43
NECAP1-211ENST00000638334 CYP46A1Q9Y6A2 500 aa12.34□□□□□ -0.43
NECAP1-211ENST00000638334 KDM6AO15550 1401 aaPredicted RBP12.34□□□□□ -0.43
NECAP1-211ENST00000638334 CCDC171Q6TFL3 1326 aa12.34□□□□□ -0.43
NECAP1-211ENST00000638334 NEURL1BA8MQ27 555 aa12.33□□□□□ -0.44
NECAP1-211ENST00000638334 GCKRQ14397 625 aa12.33□□□□□ -0.44
NECAP1-211ENST00000638334 NECTIN1Q15223 517 aa12.33□□□□□ -0.44
NECAP1-211ENST00000638334 TSHZ3Q63HK5 1081 aa12.33□□□□□ -0.44
NECAP1-211ENST00000638334 ZSCAN30Q86W11 494 aa12.33□□□□□ -0.44
NECAP1-211ENST00000638334 TTC5Q8N0Z6 440 aa12.33□□□□□ -0.44
NECAP1-211ENST00000638334 UBE2Q2Q8WVN8 375 aa12.33□□□□□ -0.44
NECAP1-211ENST00000638334 MAP4K1Q92918 833 aa12.33□□□□□ -0.44
NECAP1-211ENST00000638334 GPR108Q9NPR9 543 aa12.33□□□□□ -0.44
NECAP1-211ENST00000638334 ZSCAN22P10073 491 aaPredicted RBP12.32□□□□□ -0.44
NECAP1-211ENST00000638334 ANKRD13DQ6ZTN6 518 aa12.32□□□□□ -0.44
NECAP1-211ENST00000638334 AACSQ86V21 672 aa12.32□□□□□ -0.44
NECAP1-211ENST00000638334 RTN4Q9NQC3 1192 aaKnown RBP12.32□□□□□ -0.44
NECAP1-211ENST00000638334 ATG3Q9NT62 314 aa12.32□□□□□ -0.44
NECAP1-211ENST00000638334 FBXO3Q9UK99 471 aa12.32□□□□□ -0.44
NECAP1-211ENST00000638334 SMC3Q9UQE7 1217 aa12.32□□□□□ -0.44
NECAP1-211ENST00000638334 AXIN2Q9Y2T1 843 aa12.32□□□□□ -0.44
NECAP1-211ENST00000638334 RPAP1Q9BWH6 1393 aaPredicted RBP12.31□□□□□ -0.44
NECAP1-211ENST00000638334 ATP5JP18859 108 aa12.31□□□□□ -0.44
NECAP1-211ENST00000638334 UBE2HP62256 183 aa12.31□□□□□ -0.44
NECAP1-211ENST00000638334 PKP1Q13835 747 aa12.31□□□□□ -0.44
NECAP1-211ENST00000638334 CWC27Q6UX04 472 aaKnown RBP12.31□□□□□ -0.44
NECAP1-211ENST00000638334 RUFY3Q7L099 469 aa12.31□□□□□ -0.44
NECAP1-211ENST00000638334 GPT2Q8TD30 523 aa12.31□□□□□ -0.44
NECAP1-211ENST00000638334 SUCLG2Q96I99 432 aa12.31□□□□□ -0.44
NECAP1-211ENST00000638334 BICC1Q9H694 974 aaKnown RBP12.31□□□□□ -0.44
NECAP1-211ENST00000638334 RRAGDQ9NQL2 400 aaPredicted RBP12.31□□□□□ -0.44
NECAP1-211ENST00000638334 MED23Q9ULK4 1368 aa12.3□□□□□ -0.44
NECAP1-211ENST00000638334 ERVV-2B6SEH9 535 aa12.3□□□□□ -0.44
NECAP1-211ENST00000638334 STX6O43752 255 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms