RNA–Protein interactions for RNA: ENST00000638163.1

LINC00598-216, long intergenic non-protein coding RNA 598, humanhuman

TSL 4 BASIC

Gene LINC00598, Length 528 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-216ENST00000638163 TNNQ9UQP3 1299 aa12.93□□□□□ -0.34
LINC00598-216ENST00000638163 UTYO14607 1347 aa12.92□□□□□ -0.34
LINC00598-216ENST00000638163 F6X3S4 739 aa12.92□□□□□ -0.34
LINC00598-216ENST00000638163 HSP90B1P14625 803 aaKnown RBP12.92□□□□□ -0.34
LINC00598-216ENST00000638163 TRIM28Q13263 835 aaKnown RBP12.92□□□□□ -0.34
LINC00598-216ENST00000638163 PROSER3Q2NL68 480 aa12.92□□□□□ -0.34
LINC00598-216ENST00000638163 FAM182BQ5T319 152 aa12.92□□□□□ -0.34
LINC00598-216ENST00000638163 CCDC191Q8NCU4 936 aa12.92□□□□□ -0.34
LINC00598-216ENST00000638163 NBPF26B4DH59 902 aa12.91□□□□□ -0.34
LINC00598-216ENST00000638163 A1BGP04217 495 aa12.91□□□□□ -0.34
LINC00598-216ENST00000638163 NBPF14Q5TI25 921 aa12.91□□□□□ -0.34
LINC00598-216ENST00000638163 NBPF10Q6P3W6 841 aaKnown RBP12.91□□□□□ -0.34
LINC00598-216ENST00000638163 NBPF15Q8N660 670 aa12.91□□□□□ -0.34
LINC00598-216ENST00000638163 ANKRD44Q8N8A2 993 aa12.91□□□□□ -0.34
LINC00598-216ENST00000638163 C9orf78Q9NZ63 289 aaPredicted RBP12.91□□□□□ -0.34
LINC00598-216ENST00000638163 ZNF652Q9Y2D9 606 aa12.91□□□□□ -0.34
LINC00598-216ENST00000638163 MAP3K15Q6ZN16 1313 aa12.9□□□□□ -0.34
LINC00598-216ENST00000638163 BTAF1O14981 1849 aa12.9□□□□□ -0.34
LINC00598-216ENST00000638163 GRM8O00222 908 aa12.9□□□□□ -0.34
LINC00598-216ENST00000638163 KCNQ2O43526 872 aa12.9□□□□□ -0.34
LINC00598-216ENST00000638163 ADRA2BP18089 450 aa12.9□□□□□ -0.34
LINC00598-216ENST00000638163 CRKLP46109 303 aaKnown RBP12.9□□□□□ -0.34
LINC00598-216ENST00000638163 AIMP1Q12904 312 aaKnown RBP12.9□□□□□ -0.34
LINC00598-216ENST00000638163 ZBTB47Q9UFB7 747 aaPredicted RBP12.9□□□□□ -0.34
LINC00598-216ENST00000638163 LY75O60449 1722 aa12.89□□□□□ -0.35
LINC00598-216ENST00000638163 COL5A3P25940 1745 aaPredicted RBP12.89□□□□□ -0.35
LINC00598-216ENST00000638163 PLSCR1O15162 318 aa12.89□□□□□ -0.35
LINC00598-216ENST00000638163 ANXA1P04083 346 aa12.89□□□□□ -0.35
LINC00598-216ENST00000638163 EIF5P55010 431 aaKnown RBP12.89□□□□□ -0.35
LINC00598-216ENST00000638163 HSP90AB4PQ58FF6 505 aa12.89□□□□□ -0.35
LINC00598-216ENST00000638163 SMC5Q8IY18 1101 aa12.89□□□□□ -0.35
LINC00598-216ENST00000638163 SLC4A9Q96Q91 983 aa12.89□□□□□ -0.35
LINC00598-216ENST00000638163 MEIS3Q99687 375 aa12.89□□□□□ -0.35
LINC00598-216ENST00000638163 USP44Q9H0E7 712 aa12.89□□□□□ -0.35
LINC00598-216ENST00000638163 CCNL1Q9UK58 526 aaPredicted RBP12.89□□□□□ -0.35
LINC00598-216ENST00000638163 PCDHB15Q9Y5E8 787 aa12.89□□□□□ -0.35
LINC00598-216ENST00000638163 SBF2Q86WG5 1849 aa12.89□□□□□ -0.35
LINC00598-216ENST00000638163 NEURL1BA8MQ27 555 aa12.88□□□□□ -0.35
LINC00598-216ENST00000638163 SF3B2Q13435 895 aaKnown RBP12.88□□□□□ -0.35
LINC00598-216ENST00000638163 MTX1Q13505 466 aa12.88□□□□□ -0.35
LINC00598-216ENST00000638163 GCKRQ14397 625 aa12.88□□□□□ -0.35
LINC00598-216ENST00000638163 CEP85Q6P2H3 762 aa12.88□□□□□ -0.35
LINC00598-216ENST00000638163 CLEC4GQ6UXB4 293 aa12.88□□□□□ -0.35
LINC00598-216ENST00000638163 GIGYF2Q6Y7W6 1299 aaKnown RBP12.88□□□□□ -0.35
LINC00598-216ENST00000638163 CWC25Q9NXE8 425 aaPredicted RBP12.88□□□□□ -0.35
LINC00598-216ENST00000638163 ZBTB1Q9Y2K1 713 aa12.88□□□□□ -0.35
LINC00598-216ENST00000638163 RGPD3A6NKT7 1758 aaPredicted RBP12.88□□□□□ -0.35
LINC00598-216ENST00000638163 RGPD4Q7Z3J3 1758 aa12.88□□□□□ -0.35
LINC00598-216ENST00000638163 ARFGEF2Q9Y6D5 1785 aa12.88□□□□□ -0.35
LINC00598-216ENST00000638163 TCIRG1Q13488 830 aa12.87□□□□□ -0.35
LINC00598-216ENST00000638163 PARP10Q53GL7 1025 aa12.87□□□□□ -0.35
LINC00598-216ENST00000638163 AK7Q96M32 723 aa12.87□□□□□ -0.35
LINC00598-216ENST00000638163 MYD88Q99836 296 aa12.87□□□□□ -0.35
LINC00598-216ENST00000638163 NUP188Q5SRE5 1749 aa12.87□□□□□ -0.35
LINC00598-216ENST00000638163 KAT6BQ8WYB5 2073 aa12.86□□□□□ -0.35
LINC00598-216ENST00000638163 RPS6KA4O75676 772 aa12.86□□□□□ -0.35
LINC00598-216ENST00000638163 ITPK1Q13572 414 aa12.86□□□□□ -0.35
LINC00598-216ENST00000638163 INTS5Q6P9B9 1019 aaKnown RBP12.86□□□□□ -0.35
LINC00598-216ENST00000638163 DZIP3Q86Y13 1208 aaKnown RBP12.86□□□□□ -0.35
LINC00598-216ENST00000638163 ISCA1Q9BUE6 129 aa12.86□□□□□ -0.35
LINC00598-216ENST00000638163 TRIM37O94972 964 aa12.85□□□□□ -0.35
LINC00598-216ENST00000638163 IGKV5-2P06315 115 aa12.85□□□□□ -0.35
LINC00598-216ENST00000638163 ATP8B2P98198 1209 aa12.85□□□□□ -0.35
LINC00598-216ENST00000638163 RTCBQ9Y3I0 505 aaKnown RBP12.85□□□□□ -0.35
LINC00598-216ENST00000638163 RAB11FIP3O75154 756 aa12.84□□□□□ -0.35
LINC00598-216ENST00000638163 TTLL7Q6ZT98 887 aa12.84□□□□□ -0.35
LINC00598-216ENST00000638163 FLAD1Q8NFF5 587 aa12.84□□□□□ -0.35
LINC00598-216ENST00000638163 SSH3Q8TE77 659 aa12.84□□□□□ -0.35
LINC00598-216ENST00000638163 DCTPP1Q9H773 170 aa12.84□□□□□ -0.35
LINC00598-216ENST00000638163 CDHR2Q9BYE9 1310 aa12.84□□□□□ -0.35
LINC00598-216ENST00000638163 EIF5BO60841 1220 aaKnown RBP12.83□□□□□ -0.36
LINC00598-216ENST00000638163 IGHDP01880 384 aa12.83□□□□□ -0.36
LINC00598-216ENST00000638163 PCCAP05165 728 aaPredicted RBP12.83□□□□□ -0.36
LINC00598-216ENST00000638163 SSFA2P28290 1259 aa12.83□□□□□ -0.36
LINC00598-216ENST00000638163 BAG6P46379 1132 aa12.83□□□□□ -0.36
LINC00598-216ENST00000638163 CWF19L2Q2TBE0 894 aaKnown RBP12.83□□□□□ -0.36
LINC00598-216ENST00000638163 ERC1Q8IUD2 1116 aa12.83□□□□□ -0.36
LINC00598-216ENST00000638163 ZBTB38Q8NAP3 1195 aaPredicted RBP12.83□□□□□ -0.36
LINC00598-216ENST00000638163 LINC00116Q8NCU8 138 aa12.83□□□□□ -0.36
LINC00598-216ENST00000638163 ZBTB3Q9H5J0 574 aa12.83□□□□□ -0.36
LINC00598-216ENST00000638163 ZNF330Q9Y3S2 320 aaPredicted RBP12.83□□□□□ -0.36
LINC00598-216ENST00000638163 LRRFIP2Q9Y608 721 aaKnown RBP12.83□□□□□ -0.36
LINC00598-216ENST00000638163 H7C1W4 665 aa12.82□□□□□ -0.36
LINC00598-216ENST00000638163 NBPF7P0C2Y1 421 aaPredicted RBP12.82□□□□□ -0.36
LINC00598-216ENST00000638163 NUCB1Q02818 461 aa12.82□□□□□ -0.36
LINC00598-216ENST00000638163 PPP1R42Q7Z4L9 355 aa12.82□□□□□ -0.36
LINC00598-216ENST00000638163 DEFB132Q7Z7B7 95 aa12.82□□□□□ -0.36
LINC00598-216ENST00000638163 PLA2G12BQ9BX93 195 aa12.82□□□□□ -0.36
LINC00598-216ENST00000638163 FBXO3Q9UK99 471 aa12.82□□□□□ -0.36
LINC00598-216ENST00000638163 C4BP0C0L5 1744 aa12.82□□□□□ -0.36
LINC00598-216ENST00000638163 ZPR1O75312 459 aa12.81□□□□□ -0.36
LINC00598-216ENST00000638163 APBA3O96018 575 aa12.81□□□□□ -0.36
LINC00598-216ENST00000638163 PIP4K2AP48426 406 aaPredicted RBP12.81□□□□□ -0.36
LINC00598-216ENST00000638163 POLA2Q14181 598 aa12.81□□□□□ -0.36
LINC00598-216ENST00000638163 RABL6Q3YEC7 729 aaPredicted RBP12.81□□□□□ -0.36
LINC00598-216ENST00000638163 ZNF34Q8IZ26 560 aa12.81□□□□□ -0.36
LINC00598-216ENST00000638163 ARXQ96QS3 562 aa12.81□□□□□ -0.36
LINC00598-216ENST00000638163 C1orf115Q9H7X2 142 aa12.81□□□□□ -0.36
LINC00598-216ENST00000638163 NARFQ9UHQ1 456 aa12.81□□□□□ -0.36
LINC00598-216ENST00000638163 ANKRD36CQ5JPF3 1778 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms