RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 TTC6Q86TZ1 520 aa24.12■■□□□ 1.45
CACNA1A-243ENST00000637616 USHBP1Q8N6Y0 703 aa24.12■■□□□ 1.45
CACNA1A-243ENST00000637616 TFIP11Q9UBB9 837 aaKnown RBP24.12■■□□□ 1.45
CACNA1A-243ENST00000637616 NRBP1Q9UHY1 535 aa24.12■■□□□ 1.45
CACNA1A-243ENST00000637616 RAB11FIP3O75154 756 aa24.11■■□□□ 1.45
CACNA1A-243ENST00000637616 CCDC192P0DO97 292 aa24.11■■□□□ 1.45
CACNA1A-243ENST00000637616 TAF7Q15545 349 aaPredicted RBP24.11■■□□□ 1.45
CACNA1A-243ENST00000637616 CEP170BQ9Y4F5 1589 aaPredicted RBP24.11■■□□□ 1.45
CACNA1A-243ENST00000637616 ARHGEF10O15013 1369 aa24.1■■□□□ 1.45
CACNA1A-243ENST00000637616 POLA2Q14181 598 aa24.1■■□□□ 1.45
CACNA1A-243ENST00000637616 CHAF1AQ13111 956 aaPredicted RBP24.1■■□□□ 1.45
CACNA1A-243ENST00000637616 CDC37L1Q7L3B6 337 aa24.1■■□□□ 1.45
CACNA1A-243ENST00000637616 LARP1BQ659C4 914 aaKnown RBP24.09■■□□□ 1.45
CACNA1A-243ENST00000637616 DRC7Q8IY82 874 aa24.09■■□□□ 1.45
CACNA1A-243ENST00000637616 TPCN1Q9ULQ1 816 aa24.09■■□□□ 1.45
CACNA1A-243ENST00000637616 CYP46A1Q9Y6A2 500 aa24.09■■□□□ 1.45
CACNA1A-243ENST00000637616 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.09■■□□□ 1.45
CACNA1A-243ENST00000637616 CCDC186Q7Z3E2 898 aa24.09■■□□□ 1.45
CACNA1A-243ENST00000637616 PA2G4Q9UQ80 394 aaKnown RBP24.08■■□□□ 1.45
CACNA1A-243ENST00000637616 USP6P35125 1406 aa24.08■■□□□ 1.45
CACNA1A-243ENST00000637616 PI4KAP2A4QPH2 592 aa24.08■■□□□ 1.45
CACNA1A-243ENST00000637616 PI4KAP1Q8N8J0 262 aa24.08■■□□□ 1.45
CACNA1A-243ENST00000637616 C16orf45Q96MC5 204 aaPredicted RBP24.08■■□□□ 1.45
CACNA1A-243ENST00000637616 MRVI1Q9Y6F6 885 aa24.08■■□□□ 1.45
CACNA1A-243ENST00000637616 ITSN1Q15811 1721 aa24.08■■□□□ 1.44
CACNA1A-243ENST00000637616 KCNJ4P48050 445 aa24.07■■□□□ 1.44
CACNA1A-243ENST00000637616 NRXN3Q9Y4C0 1643 aa24.07■■□□□ 1.44
CACNA1A-243ENST00000637616 TYRO3Q06418 890 aa24.07■■□□□ 1.44
CACNA1A-243ENST00000637616 NAA30Q147X3 362 aaPredicted RBP24.07■■□□□ 1.44
CACNA1A-243ENST00000637616 AKAP12Q02952 1782 aa24.06■■□□□ 1.44
CACNA1A-243ENST00000637616 PLEKHG3A1L390 1219 aa24.06■■□□□ 1.44
CACNA1A-243ENST00000637616 VPS53Q5VIR6 699 aa24.06■■□□□ 1.44
CACNA1A-243ENST00000637616 NUP62CLQ9H1M0 184 aa24.06■■□□□ 1.44
CACNA1A-243ENST00000637616 DACT1Q9NYF0 836 aa24.06■■□□□ 1.44
CACNA1A-243ENST00000637616 IGSF1Q8N6C5 1336 aa24.06■■□□□ 1.44
CACNA1A-243ENST00000637616 EPB41L2O43491 1005 aaKnown RBP24.06■■□□□ 1.44
CACNA1A-243ENST00000637616 CHPF2Q9P2E5 772 aa24.06■■□□□ 1.44
CACNA1A-243ENST00000637616 STK3Q13188 491 aa24.05■■□□□ 1.44
CACNA1A-243ENST00000637616 MAP3K11Q16584 847 aa24.05■■□□□ 1.44
CACNA1A-243ENST00000637616 ANO6Q4KMQ2 910 aa24.05■■□□□ 1.44
CACNA1A-243ENST00000637616 NGDNQ8NEJ9 315 aaKnown RBP24.05■■□□□ 1.44
CACNA1A-243ENST00000637616 FAM200AQ8TCP9 573 aa24.05■■□□□ 1.44
CACNA1A-243ENST00000637616 FAM227BQ96M60 508 aa24.05■■□□□ 1.44
CACNA1A-243ENST00000637616 FLT4P35916 1363 aa24.05■■□□□ 1.44
CACNA1A-243ENST00000637616 SLC26A8Q96RN1 970 aa24.05■■□□□ 1.44
CACNA1A-243ENST00000637616 ZSWIM6Q9HCJ5 1215 aa24.05■■□□□ 1.44
CACNA1A-243ENST00000637616 TAF6LQ9Y6J9 622 aa24.05■■□□□ 1.44
CACNA1A-243ENST00000637616 GOLGA6L6A8MZA4 724 aa24.04■■□□□ 1.44
CACNA1A-243ENST00000637616 XRN1Q8IZH2 1706 aaKnown RBP24.04■■□□□ 1.44
CACNA1A-243ENST00000637616 USP31Q70CQ4 1352 aa24.04■■□□□ 1.44
CACNA1A-243ENST00000637616 KCNQ3O43525 872 aa24.04■■□□□ 1.44
CACNA1A-243ENST00000637616 RGPD1P0DJD0 1748 aa24.04■■□□□ 1.44
CACNA1A-243ENST00000637616 KDRP35968 1356 aa24.03■■□□□ 1.44
CACNA1A-243ENST00000637616 GLRX3O76003 335 aaKnown RBP24.03■■□□□ 1.44
CACNA1A-243ENST00000637616 CBX8Q9HC52 389 aa24.03■■□□□ 1.44
CACNA1A-243ENST00000637616 PODXL2Q9NZ53 605 aa24.03■■□□□ 1.44
CACNA1A-243ENST00000637616 KRT85P78386 507 aa24.03■■□□□ 1.44
CACNA1A-243ENST00000637616 TRIM5Q9C035 493 aa24.03■■□□□ 1.44
CACNA1A-243ENST00000637616 TNMDQ9H2S6 317 aa24.03■■□□□ 1.44
CACNA1A-243ENST00000637616 RBM8AQ9Y5S9 174 aaKnown RBP24.03■■□□□ 1.44
CACNA1A-243ENST00000637616 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.03■■□□□ 1.44
CACNA1A-243ENST00000637616 NLRP6P59044 892 aa24.02■■□□□ 1.44
CACNA1A-243ENST00000637616 SBNO1A3KN83 1393 aa24.02■■□□□ 1.44
CACNA1A-243ENST00000637616 GOLGA6L4A6NEF3 574 aa24.02■■□□□ 1.44
CACNA1A-243ENST00000637616 BEND3Q5T5X7 828 aa24.02■■□□□ 1.44
CACNA1A-243ENST00000637616 CLASRPQ8N2M8 674 aaKnown RBP24.02■■□□□ 1.44
CACNA1A-243ENST00000637616 UTP14CQ5TAP6 766 aaKnown RBP24.01■■□□□ 1.43
CACNA1A-243ENST00000637616 FAM69CQ0P6D2 419 aa24.01■■□□□ 1.43
CACNA1A-243ENST00000637616 NECTIN1Q15223 517 aa24.01■■□□□ 1.43
CACNA1A-243ENST00000637616 CREB3L3Q68CJ9 461 aa24.01■■□□□ 1.43
CACNA1A-243ENST00000637616 RUFY2Q8WXA3 655 aa24.01■■□□□ 1.43
CACNA1A-243ENST00000637616 DNAAF4Q8WXU2 420 aa24.01■■□□□ 1.43
CACNA1A-243ENST00000637616 ZSCAN31Q96LW9 406 aaPredicted RBP24.01■■□□□ 1.43
CACNA1A-243ENST00000637616 SH2B1Q9NRF2 756 aaPredicted RBP24.01■■□□□ 1.43
CACNA1A-243ENST00000637616 SIRT1Q96EB6 747 aa24■■□□□ 1.43
CACNA1A-243ENST00000637616 ZKSCAN1P17029 563 aaPredicted RBP24■■□□□ 1.43
CACNA1A-243ENST00000637616 LARP1Q6PKG0 1096 aaKnown RBP24■■□□□ 1.43
CACNA1A-243ENST00000637616 ANKRD7Q92527 254 aa24■■□□□ 1.43
CACNA1A-243ENST00000637616 LGR6Q9HBX8 967 aa24■■□□□ 1.43
CACNA1A-243ENST00000637616 IFIT2P09913 472 aaKnown RBP23.99■■□□□ 1.43
CACNA1A-243ENST00000637616 ECHDC1Q9NTX5 307 aa23.99■■□□□ 1.43
CACNA1A-243ENST00000637616 TPM3P06753 285 aa23.99■■□□□ 1.43
CACNA1A-243ENST00000637616 AACSQ86V21 672 aa23.99■■□□□ 1.43
CACNA1A-243ENST00000637616 SPATA32Q96LK8 384 aa23.99■■□□□ 1.43
CACNA1A-243ENST00000637616 DNAJC25Q9H1X3 360 aa23.99■■□□□ 1.43
CACNA1A-243ENST00000637616 CCDC171Q6TFL3 1326 aa23.98■■□□□ 1.43
CACNA1A-243ENST00000637616 NCBP1Q09161 790 aaKnown RBP23.98■■□□□ 1.43
CACNA1A-243ENST00000637616 NMIQ13287 307 aaPredicted RBP23.98■■□□□ 1.43
CACNA1A-243ENST00000637616 ZNF592Q92610 1267 aa23.98■■□□□ 1.43
CACNA1A-243ENST00000637616 DDX11Q96FC9 970 aa23.98■■□□□ 1.43
CACNA1A-243ENST00000637616 CCDC8Q9H0W5 538 aaPredicted RBP23.98■■□□□ 1.43
CACNA1A-243ENST00000637616 ESF1Q9H501 851 aaKnown RBP23.98■■□□□ 1.43
CACNA1A-243ENST00000637616 HTATSF1O43719 755 aaKnown RBP23.98■■□□□ 1.43
CACNA1A-243ENST00000637616 NR1I2O75469 434 aa23.98■■□□□ 1.43
CACNA1A-243ENST00000637616 MAP3K5Q99683 1374 aa23.98■■□□□ 1.43
CACNA1A-243ENST00000637616 CTIFO43310 598 aaKnown RBP23.97■■□□□ 1.43
CACNA1A-243ENST00000637616 FAM208AQ9UK61 1670 aaKnown RBP23.97■■□□□ 1.43
CACNA1A-243ENST00000637616 TNNT1P13805 278 aa23.97■■□□□ 1.43
CACNA1A-243ENST00000637616 CEBPZQ03701 1054 aaKnown RBP23.96■■□□□ 1.43
CACNA1A-243ENST00000637616 ZSCAN25Q6NSZ9 544 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms