RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 NFE2L2Q16236 605 aa24.47■■□□□ 1.51
CLN6-220ENST00000637450 STYK1Q6J9G0 422 aa24.47■■□□□ 1.51
CLN6-220ENST00000637450 NBPF5PQ86XG9 351 aaPredicted RBP24.47■■□□□ 1.51
CLN6-220ENST00000637450 CNKSR1Q969H4 720 aa24.47■■□□□ 1.51
CLN6-220ENST00000637450 FSTL1Q12841 308 aa24.46■■□□□ 1.51
CLN6-220ENST00000637450 ZNF219Q9P2Y4 722 aaPredicted RBP24.46■■□□□ 1.51
CLN6-220ENST00000637450 ANKRD31Q8N7Z5 1873 aa24.46■■□□□ 1.51
CLN6-220ENST00000637450 DNAJC5GQ8N7S2 189 aa24.45■■□□□ 1.5
CLN6-220ENST00000637450 MASTLQ96GX5 879 aa24.45■■□□□ 1.5
CLN6-220ENST00000637450 PNNQ9H307 717 aaKnown RBP24.45■■□□□ 1.5
CLN6-220ENST00000637450 EIF4A1P60842 406 aaKnown RBP24.43■■□□□ 1.5
CLN6-220ENST00000637450 TPTE2Q6XPS3 522 aa24.43■■□□□ 1.5
CLN6-220ENST00000637450 NIP7Q9Y221 180 aaKnown RBP eCLIP24.43■■□□□ 1.5
CLN6-220ENST00000637450 KLRG2A4D1S0 409 aaPredicted RBP24.42■■□□□ 1.5
CLN6-220ENST00000637450 VEGFAP15692 232 aaPredicted RBP24.42■■□□□ 1.5
CLN6-220ENST00000637450 HLFQ16534 295 aa24.42■■□□□ 1.5
CLN6-220ENST00000637450 PRPF40BQ6NWY9 871 aaKnown RBP24.42■■□□□ 1.5
CLN6-220ENST00000637450 THUMPD2Q9BTF0 503 aaKnown RBP24.42■■□□□ 1.5
CLN6-220ENST00000637450 BCORQ6W2J9 1755 aa24.42■■□□□ 1.5
CLN6-220ENST00000637450 LTBP3Q9NS15 1303 aa24.41■■□□□ 1.5
CLN6-220ENST00000637450 MAPK8IP3Q9UPT6 1336 aa24.4■■□□□ 1.5
CLN6-220ENST00000637450 RALBP1Q15311 655 aa24.4■■□□□ 1.5
CLN6-220ENST00000637450 COL11A2P13942 1736 aaPredicted RBP24.39■■□□□ 1.5
CLN6-220ENST00000637450 NPR1P16066 1061 aa24.39■■□□□ 1.49
CLN6-220ENST00000637450 ERFEQ4G0M1 354 aa24.39■■□□□ 1.49
CLN6-220ENST00000637450 SOGA3Q5TF21 947 aa24.39■■□□□ 1.49
CLN6-220ENST00000637450 DPY19L2Q6NUT2 758 aa24.39■■□□□ 1.49
CLN6-220ENST00000637450 SMC1BQ8NDV3 1235 aa24.39■■□□□ 1.49
CLN6-220ENST00000637450 C7orf43Q8WVR3 580 aa24.39■■□□□ 1.49
CLN6-220ENST00000637450 TAOK3Q9H2K8 898 aa24.39■■□□□ 1.49
CLN6-220ENST00000637450 ERVV-1B6SEH8 477 aa24.38■■□□□ 1.49
CLN6-220ENST00000637450 NGEFQ8N5V2 710 aa24.38■■□□□ 1.49
CLN6-220ENST00000637450 FAM177BA6PVY3 158 aa24.37■■□□□ 1.49
CLN6-220ENST00000637450 POTECB2RU33 542 aa24.37■■□□□ 1.49
CLN6-220ENST00000637450 TNRC6CQ9HCJ0 1690 aaKnown RBP24.37■■□□□ 1.49
CLN6-220ENST00000637450 RRP7AQ9Y3A4 280 aaKnown RBP24.36■■□□□ 1.49
CLN6-220ENST00000637450 HTRA3P83110 453 aa24.35■■□□□ 1.49
CLN6-220ENST00000637450 SLX4Q8IY92 1834 aa24.35■■□□□ 1.49
CLN6-220ENST00000637450 RIPK4P57078 832 aa24.34■■□□□ 1.49
CLN6-220ENST00000637450 TTLL7Q6ZT98 887 aa24.34■■□□□ 1.49
CLN6-220ENST00000637450 MAP3K15Q6ZN16 1313 aa24.34■■□□□ 1.49
CLN6-220ENST00000637450 DLG5Q8TDM6 1919 aa24.33■■□□□ 1.49
CLN6-220ENST00000637450 FER1L6Q2WGJ9 1857 aa24.33■■□□□ 1.49
CLN6-220ENST00000637450 MYL6BP14649 208 aa24.33■■□□□ 1.49
CLN6-220ENST00000637450 GTF2E1P29083 439 aaPredicted RBP24.33■■□□□ 1.49
CLN6-220ENST00000637450 CCDC93Q567U6 631 aa24.32■■□□□ 1.48
CLN6-220ENST00000637450 KIF6Q6ZMV9 814 aa24.32■■□□□ 1.48
CLN6-220ENST00000637450 NYXQ9GZU5 481 aa24.32■■□□□ 1.48
CLN6-220ENST00000637450 TSPYL4Q9UJ04 414 aa24.32■■□□□ 1.48
CLN6-220ENST00000637450 KDM3BQ7LBC6 1761 aa24.31■■□□□ 1.48
CLN6-220ENST00000637450 DDX10Q13206 875 aaKnown RBP24.31■■□□□ 1.48
CLN6-220ENST00000637450 CCDC88AQ3V6T2 1871 aa24.31■■□□□ 1.48
CLN6-220ENST00000637450 IFFO2Q5TF58 517 aa24.31■■□□□ 1.48
CLN6-220ENST00000637450 KLRG1Q96E93 195 aa24.31■■□□□ 1.48
CLN6-220ENST00000637450 ALDH1B1P30837 517 aa24.3■■□□□ 1.48
CLN6-220ENST00000637450 TMPOP42166 694 aaKnown RBP24.3■■□□□ 1.48
CLN6-220ENST00000637450 BABAM1Q9NWV8 329 aa24.3■■□□□ 1.48
CLN6-220ENST00000637450 ERBB4Q15303 1308 aa24.3■■□□□ 1.48
CLN6-220ENST00000637450 TIAM2Q8IVF5 1701 aa24.3■■□□□ 1.48
CLN6-220ENST00000637450 LAMB4A4D0S4 1761 aa24.29■■□□□ 1.48
CLN6-220ENST00000637450 CRY2Q49AN0 593 aa24.29■■□□□ 1.48
CLN6-220ENST00000637450 NUTM1Q86Y26 1132 aa24.29■■□□□ 1.48
CLN6-220ENST00000637450 ZBTB3Q9H5J0 574 aa24.29■■□□□ 1.48
CLN6-220ENST00000637450 DDNO94850 711 aaPredicted RBP24.28■■□□□ 1.48
CLN6-220ENST00000637450 FKBP4Q02790 459 aaKnown RBP eCLIP24.28■■□□□ 1.48
CLN6-220ENST00000637450 OLFM4Q6UX06 510 aa24.28■■□□□ 1.48
CLN6-220ENST00000637450 RTKN2Q8IZC4 609 aa24.28■■□□□ 1.48
CLN6-220ENST00000637450 WDR90Q96KV7 1748 aa24.27■■□□□ 1.48
CLN6-220ENST00000637450 LMOD3Q0VAK6 560 aa24.27■■□□□ 1.48
CLN6-220ENST00000637450 PDIA6Q15084 440 aa24.27■■□□□ 1.48
CLN6-220ENST00000637450 GIGYF2Q6Y7W6 1299 aaKnown RBP24.27■■□□□ 1.48
CLN6-220ENST00000637450 ZNF34Q8IZ26 560 aa24.27■■□□□ 1.48
CLN6-220ENST00000637450 MYBBP1AQ9BQG0 1328 aaKnown RBP24.27■■□□□ 1.48
CLN6-220ENST00000637450 GPTP24298 496 aa24.26■■□□□ 1.47
CLN6-220ENST00000637450 SUSD4Q5VX71 490 aa24.26■■□□□ 1.47
CLN6-220ENST00000637450 LRP10Q7Z4F1 713 aa24.26■■□□□ 1.47
CLN6-220ENST00000637450 JMYQ8N9B5 988 aa24.26■■□□□ 1.47
CLN6-220ENST00000637450 UBN2Q6ZU65 1347 aa24.26■■□□□ 1.47
CLN6-220ENST00000637450 ABCC12Q96J65 1359 aa24.26■■□□□ 1.47
CLN6-220ENST00000637450 ARFGEF2Q9Y6D5 1785 aa24.25■■□□□ 1.47
CLN6-220ENST00000637450 EIF2S2P20042 333 aaKnown RBP24.25■■□□□ 1.47
CLN6-220ENST00000637450 ZNF277Q9NRM2 450 aaPredicted RBP24.25■■□□□ 1.47
CLN6-220ENST00000637450 DICER1Q9UPY3 1922 aaKnown RBP24.25■■□□□ 1.47
CLN6-220ENST00000637450 IBTKQ9P2D0 1353 aaPredicted RBP24.24■■□□□ 1.47
CLN6-220ENST00000637450 HOXA10P31260 410 aaPredicted RBP24.23■■□□□ 1.47
CLN6-220ENST00000637450 CCDC146Q8IYE0 955 aa24.22■■□□□ 1.47
CLN6-220ENST00000637450 SYNE4Q8N205 404 aa24.22■■□□□ 1.47
CLN6-220ENST00000637450 L3MBTL3Q96JM7 780 aaPredicted RBP24.22■■□□□ 1.47
CLN6-220ENST00000637450 RIC1Q4ADV7 1423 aa24.21■■□□□ 1.47
CLN6-220ENST00000637450 NTSR2O95665 410 aa24.21■■□□□ 1.47
CLN6-220ENST00000637450 PROSER3Q2NL68 480 aa24.21■■□□□ 1.47
CLN6-220ENST00000637450 PARP10Q53GL7 1025 aa24.21■■□□□ 1.47
CLN6-220ENST00000637450 PPP1R42Q7Z4L9 355 aa24.21■■□□□ 1.47
CLN6-220ENST00000637450 CACNA1SQ13698 1873 aa24.21■■□□□ 1.47
CLN6-220ENST00000637450 PCNTO95613 3336 aa24.2■■□□□ 1.47
CLN6-220ENST00000637450 NUP98P52948 1817 aa24.2■■□□□ 1.46
CLN6-220ENST00000637450 IQCA1LA6NCM1 817 aa24.2■■□□□ 1.46
CLN6-220ENST00000637450 CHL1O00533 1208 aa24.2■■□□□ 1.46
CLN6-220ENST00000637450 NEUROD2Q15784 382 aa24.2■■□□□ 1.46
CLN6-220ENST00000637450 CC2D2BQ6DHV5 1058 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms