RNA–Protein interactions for RNA: ENST00000637387.1

CTSD-211, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-211ENST00000637387 SLC4A10Q6U841 1118 aa19.33■□□□□ 0.69
CTSD-211ENST00000637387 PI4KAP1Q8N8J0 262 aa19.33■□□□□ 0.69
CTSD-211ENST00000637387 PALLDQ8WX93 1383 aa19.33■□□□□ 0.68
CTSD-211ENST00000637387 ZNF827Q17R98 1081 aa19.32■□□□□ 0.68
CTSD-211ENST00000637387 DNAAF4Q8WXU2 420 aa19.32■□□□□ 0.68
CTSD-211ENST00000637387 MEIS3Q99687 375 aa19.32■□□□□ 0.68
CTSD-211ENST00000637387 XAGE3Q8WTP9 111 aa19.32■□□□□ 0.68
CTSD-211ENST00000637387 AKT1S1Q96B36 256 aa19.32■□□□□ 0.68
CTSD-211ENST00000637387 RBM42Q9BTD8 480 aaKnown RBP19.32■□□□□ 0.68
CTSD-211ENST00000637387 ZBTB7AO95365 584 aa19.31■□□□□ 0.68
CTSD-211ENST00000637387 A1BGP04217 495 aa19.31■□□□□ 0.68
CTSD-211ENST00000637387 PTGER2P43116 358 aa19.31■□□□□ 0.68
CTSD-211ENST00000637387 BEND3Q5T5X7 828 aa19.31■□□□□ 0.68
CTSD-211ENST00000637387 KSR2Q6VAB6 950 aa19.31■□□□□ 0.68
CTSD-211ENST00000637387 CENPQQ7L2Z9 268 aaPredicted RBP19.31■□□□□ 0.68
CTSD-211ENST00000637387 C1orf115Q9H7X2 142 aa19.31■□□□□ 0.68
CTSD-211ENST00000637387 COPS6Q7L5N1 327 aa19.3■□□□□ 0.68
CTSD-211ENST00000637387 MAP3K2Q9Y2U5 619 aa19.3■□□□□ 0.68
CTSD-211ENST00000637387 NUP98P52948 1817 aa19.3■□□□□ 0.68
CTSD-211ENST00000637387 BCORQ6W2J9 1755 aa19.29■□□□□ 0.68
CTSD-211ENST00000637387 TEX13AQ9BXU3 409 aaPredicted RBP19.29■□□□□ 0.68
CTSD-211ENST00000637387 CHMP4BQ9H444 224 aaKnown RBP19.29■□□□□ 0.68
CTSD-211ENST00000637387 CYP19A1P11511 503 aaPredicted RBP19.28■□□□□ 0.68
CTSD-211ENST00000637387 AIMP1Q12904 312 aaKnown RBP19.28■□□□□ 0.68
CTSD-211ENST00000637387 SGIP1Q9BQI5 828 aa19.28■□□□□ 0.68
CTSD-211ENST00000637387 MTFR1LQ9H019 292 aa19.28■□□□□ 0.68
CTSD-211ENST00000637387 IBTKQ9P2D0 1353 aaPredicted RBP19.28■□□□□ 0.68
CTSD-211ENST00000637387 HDAC1Q13547 482 aaPredicted RBP19.27■□□□□ 0.68
CTSD-211ENST00000637387 SIRT2Q8IXJ6 389 aa19.27■□□□□ 0.68
CTSD-211ENST00000637387 PPP1R1BQ9UD71 204 aaPredicted RBP19.27■□□□□ 0.68
CTSD-211ENST00000637387 ATF5Q9Y2D1 282 aaPredicted RBP19.27■□□□□ 0.68
CTSD-211ENST00000637387 QSER1Q2KHR3 1735 aa19.27■□□□□ 0.68
CTSD-211ENST00000637387 LOC102724428A0A0B4J2F2 783 aa19.27■□□□□ 0.67
CTSD-211ENST00000637387 KCNQ4P56696 695 aa19.27■□□□□ 0.67
CTSD-211ENST00000637387 SIK1P57059 783 aa19.27■□□□□ 0.67
CTSD-211ENST00000637387 SRCIN1Q9C0H9 1055 aa19.27■□□□□ 0.67
CTSD-211ENST00000637387 DDX58O95786 925 aaKnown RBP19.26■□□□□ 0.67
CTSD-211ENST00000637387 ITPK1Q13572 414 aa19.26■□□□□ 0.67
CTSD-211ENST00000637387 USP44Q9H0E7 712 aa19.26■□□□□ 0.67
CTSD-211ENST00000637387 TTLL7Q6ZT98 887 aa19.25■□□□□ 0.67
CTSD-211ENST00000637387 SMARCC1Q92922 1105 aaPredicted RBP19.25■□□□□ 0.67
CTSD-211ENST00000637387 ZBTB1Q9Y2K1 713 aa19.25■□□□□ 0.67
CTSD-211ENST00000637387 STARD3NLO95772 234 aa19.24■□□□□ 0.67
CTSD-211ENST00000637387 SKAP1Q86WV1 359 aa19.24■□□□□ 0.67
CTSD-211ENST00000637387 CCNL1Q9UK58 526 aaPredicted RBP19.24■□□□□ 0.67
CTSD-211ENST00000637387 PNPLA7Q6ZV29 1317 aa19.24■□□□□ 0.67
CTSD-211ENST00000637387 IGKV5-2P06315 115 aa19.23■□□□□ 0.67
CTSD-211ENST00000637387 CWF19L2Q2TBE0 894 aaKnown RBP19.23■□□□□ 0.67
CTSD-211ENST00000637387 ANKRD13DQ6ZTN6 518 aa19.23■□□□□ 0.67
CTSD-211ENST00000637387 METTL22Q9BUU2 404 aaPredicted RBP19.23■□□□□ 0.67
CTSD-211ENST00000637387 SCN7AQ01118 1682 aa19.23■□□□□ 0.67
CTSD-211ENST00000637387 ALDH1L1O75891 902 aa19.23■□□□□ 0.67
CTSD-211ENST00000637387 ATP6V1AP38606 617 aa19.23■□□□□ 0.67
CTSD-211ENST00000637387 CEP85Q6P2H3 762 aa19.23■□□□□ 0.67
CTSD-211ENST00000637387 RIC3Q7Z5B4 369 aa19.23■□□□□ 0.67
CTSD-211ENST00000637387 LINS1Q8NG48 757 aa19.23■□□□□ 0.67
CTSD-211ENST00000637387 PLBD2Q8NHP8 589 aa19.23■□□□□ 0.67
CTSD-211ENST00000637387 SLC16A10Q8TF71 515 aa19.23■□□□□ 0.67
CTSD-211ENST00000637387 RWDD1Q9H446 243 aaPredicted RBP19.23■□□□□ 0.67
CTSD-211ENST00000637387 C4BP0C0L5 1744 aa19.22■□□□□ 0.67
CTSD-211ENST00000637387 TUBGCP6Q96RT7 1819 aa19.22■□□□□ 0.67
CTSD-211ENST00000637387 C4AP0C0L4 1744 aa19.22■□□□□ 0.67
CTSD-211ENST00000637387 ANKRD44Q8N8A2 993 aa19.22■□□□□ 0.67
CTSD-211ENST00000637387 GNAI3P08754 354 aa19.21■□□□□ 0.67
CTSD-211ENST00000637387 SMC5Q8IY18 1101 aa19.21■□□□□ 0.67
CTSD-211ENST00000637387 COL24A1Q17RW2 1714 aa19.21■□□□□ 0.67
CTSD-211ENST00000637387 NBPF7P0C2Y1 421 aaPredicted RBP19.2■□□□□ 0.66
CTSD-211ENST00000637387 INTS5Q6P9B9 1019 aaKnown RBP19.2■□□□□ 0.66
CTSD-211ENST00000637387 UTYO14607 1347 aa19.2■□□□□ 0.66
CTSD-211ENST00000637387 NEURL1BA8MQ27 555 aa19.19■□□□□ 0.66
CTSD-211ENST00000637387 CRKLP46109 303 aaKnown RBP19.19■□□□□ 0.66
CTSD-211ENST00000637387 MYD88Q99836 296 aa19.19■□□□□ 0.66
CTSD-211ENST00000637387 TFCP2L1Q9NZI6 479 aa19.19■□□□□ 0.66
CTSD-211ENST00000637387 UBR3Q6ZT12 1888 aa19.19■□□□□ 0.66
CTSD-211ENST00000637387 GNAI2P04899 355 aa19.19■□□□□ 0.66
CTSD-211ENST00000637387 LINC00116Q8NCU8 138 aa19.19■□□□□ 0.66
CTSD-211ENST00000637387 CCDC87Q9NVE4 849 aa19.19■□□□□ 0.66
CTSD-211ENST00000637387 LRRFIP2Q9Y608 721 aaKnown RBP19.19■□□□□ 0.66
CTSD-211ENST00000637387 IL6STP40189 918 aaPredicted RBP19.18■□□□□ 0.66
CTSD-211ENST00000637387 RPAP2Q8IXW5 612 aaPredicted RBP19.18■□□□□ 0.66
CTSD-211ENST00000637387 ZBTB3Q9H5J0 574 aa19.18■□□□□ 0.66
CTSD-211ENST00000637387 UBTFL1P0CB47 393 aaPredicted RBP19.17■□□□□ 0.66
CTSD-211ENST00000637387 HMGB2P26583 209 aaKnown RBP19.17■□□□□ 0.66
CTSD-211ENST00000637387 SYT17Q9BSW7 474 aa19.17■□□□□ 0.66
CTSD-211ENST00000637387 EIF5P55010 431 aaKnown RBP19.16■□□□□ 0.66
CTSD-211ENST00000637387 NEXNQ0ZGT2 675 aa19.16■□□□□ 0.66
CTSD-211ENST00000637387 ARXQ96QS3 562 aa19.16■□□□□ 0.66
CTSD-211ENST00000637387 FHDC1Q9C0D6 1143 aaPredicted RBP19.16■□□□□ 0.66
CTSD-211ENST00000637387 MYH3P11055 1940 aa19.16■□□□□ 0.66
CTSD-211ENST00000637387 MAP3K15Q6ZN16 1313 aa19.16■□□□□ 0.66
CTSD-211ENST00000637387 CNTNAP4Q9C0A0 1308 aa19.16■□□□□ 0.66
CTSD-211ENST00000637387 GRM8O00222 908 aa19.15■□□□□ 0.66
CTSD-211ENST00000637387 GCKRQ14397 625 aa19.15■□□□□ 0.66
CTSD-211ENST00000637387 COL23A1Q86Y22 540 aaPredicted RBP19.15■□□□□ 0.66
CTSD-211ENST00000637387 PDZRN3Q9UPQ7 1066 aa19.15■□□□□ 0.66
CTSD-211ENST00000637387 ZNF330Q9Y3S2 320 aaPredicted RBP19.15■□□□□ 0.66
CTSD-211ENST00000637387 LAMB2P55268 1798 aa19.15■□□□□ 0.66
CTSD-211ENST00000637387 KAZALD1Q96I82 304 aa19.15■□□□□ 0.66
CTSD-211ENST00000637387 COL15A1P39059 1388 aa19.14■□□□□ 0.65
CTSD-211ENST00000637387 PNMA6EA0A0J9YXQ4 647 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms