RNA–Protein interactions for RNA: ENST00000637352.1

SMARCA2-260, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-260ENST00000637352 TMEM88BA6NKF7 163 aa11.14□□□□□ -0.63
SMARCA2-260ENST00000637352 GRM1Q13255 1194 aa11.14□□□□□ -0.63
SMARCA2-260ENST00000637352 AMER1Q5JTC6 1135 aaPredicted RBP11.14□□□□□ -0.63
SMARCA2-260ENST00000637352 MAP1SQ66K74 1059 aaPredicted RBP11.14□□□□□ -0.63
SMARCA2-260ENST00000637352 STYK1Q6J9G0 422 aa11.14□□□□□ -0.63
SMARCA2-260ENST00000637352 DZIP3Q86Y13 1208 aaKnown RBP11.14□□□□□ -0.63
SMARCA2-260ENST00000637352 COL11A2P13942 1736 aaPredicted RBP11.14□□□□□ -0.63
SMARCA2-260ENST00000637352 ANKRD31Q8N7Z5 1873 aa11.14□□□□□ -0.63
SMARCA2-260ENST00000637352 RNF123Q5XPI4 1314 aa11.13□□□□□ -0.63
SMARCA2-260ENST00000637352 LTBP3Q9NS15 1303 aa11.13□□□□□ -0.63
SMARCA2-260ENST00000637352 IQCA1LA6NCM1 817 aa11.13□□□□□ -0.63
SMARCA2-260ENST00000637352 ITGBL1O95965 494 aaPredicted RBP11.13□□□□□ -0.63
SMARCA2-260ENST00000637352 IL6STP40189 918 aaPredicted RBP11.13□□□□□ -0.63
SMARCA2-260ENST00000637352 FMR1Q06787 632 aaKnown RBP eCLIP11.13□□□□□ -0.63
SMARCA2-260ENST00000637352 FAM161AQ3B820 660 aa11.13□□□□□ -0.63
SMARCA2-260ENST00000637352 NBPF5PQ86XG9 351 aaPredicted RBP11.13□□□□□ -0.63
SMARCA2-260ENST00000637352 PRDM10Q9NQV6 1147 aa11.13□□□□□ -0.63
SMARCA2-260ENST00000637352 PDZRN3Q9UPQ7 1066 aa11.13□□□□□ -0.63
SMARCA2-260ENST00000637352 USP16Q9Y5T5 823 aa11.13□□□□□ -0.63
SMARCA2-260ENST00000637352 SLX4Q8IY92 1834 aa11.12□□□□□ -0.63
SMARCA2-260ENST00000637352 EPHX2P34913 555 aa11.12□□□□□ -0.63
SMARCA2-260ENST00000637352 TRIM26Q12899 539 aaPredicted RBP11.12□□□□□ -0.63
SMARCA2-260ENST00000637352 DEFB115Q30KQ5 88 aa11.12□□□□□ -0.63
SMARCA2-260ENST00000637352 CCDC93Q567U6 631 aa11.12□□□□□ -0.63
SMARCA2-260ENST00000637352 PAXIP1Q6ZW49 1069 aaPredicted RBP11.12□□□□□ -0.63
SMARCA2-260ENST00000637352 FMNL2Q96PY5 1086 aa11.12□□□□□ -0.63
SMARCA2-260ENST00000637352 WBP1LQ9NX94 342 aa11.12□□□□□ -0.63
SMARCA2-260ENST00000637352 HACL1Q9UJ83 578 aa11.12□□□□□ -0.63
SMARCA2-260ENST00000637352 ABT1Q9ULW3 272 aaKnown RBP11.12□□□□□ -0.63
SMARCA2-260ENST00000637352 FER1L6Q2WGJ9 1857 aa11.11□□□□□ -0.63
SMARCA2-260ENST00000637352 BTBD11A6QL63 1104 aa11.11□□□□□ -0.63
SMARCA2-260ENST00000637352 GNAT3A8MTJ3 354 aa11.11□□□□□ -0.63
SMARCA2-260ENST00000637352 HSPA8P11142 646 aaKnown RBP11.11□□□□□ -0.63
SMARCA2-260ENST00000637352 FKBP4Q02790 459 aaKnown RBP eCLIP11.11□□□□□ -0.63
SMARCA2-260ENST00000637352 SOGA3Q5TF21 947 aa11.11□□□□□ -0.63
SMARCA2-260ENST00000637352 CNTROBQ8N137 903 aa11.11□□□□□ -0.63
SMARCA2-260ENST00000637352 C7orf43Q8WVR3 580 aa11.11□□□□□ -0.63
SMARCA2-260ENST00000637352 ABHD8Q96I13 439 aa11.11□□□□□ -0.63
SMARCA2-260ENST00000637352 L3MBTL3Q96JM7 780 aaPredicted RBP11.11□□□□□ -0.63
SMARCA2-260ENST00000637352 TEX13AQ9BXU3 409 aaPredicted RBP11.11□□□□□ -0.63
SMARCA2-260ENST00000637352 TIMELESSQ9UNS1 1208 aa11.11□□□□□ -0.63
SMARCA2-260ENST00000637352 SLC51AQ86UW1 340 aa11.1□□□□□ -0.63
SMARCA2-260ENST00000637352 SYNE4Q8N205 404 aa11.1□□□□□ -0.63
SMARCA2-260ENST00000637352 TSKSQ9UJT2 592 aa11.1□□□□□ -0.63
SMARCA2-260ENST00000637352 GJA3Q9Y6H8 435 aa11.1□□□□□ -0.63
SMARCA2-260ENST00000637352 CACNA1SQ13698 1873 aa11.1□□□□□ -0.63
SMARCA2-260ENST00000637352 WDR33Q9C0J8 1336 aaKnown RBP11.09□□□□□ -0.63
SMARCA2-260ENST00000637352 CCDC85CA6NKD9 419 aa11.09□□□□□ -0.63
SMARCA2-260ENST00000637352 TCERG1O14776 1098 aaKnown RBP11.09□□□□□ -0.63
SMARCA2-260ENST00000637352 NPR1P16066 1061 aa11.09□□□□□ -0.63
SMARCA2-260ENST00000637352 IARSP41252 1262 aaKnown RBP11.09□□□□□ -0.63
SMARCA2-260ENST00000637352 NGEFQ8N5V2 710 aa11.09□□□□□ -0.63
SMARCA2-260ENST00000637352 GAS2L2Q8NHY3 880 aa11.09□□□□□ -0.63
SMARCA2-260ENST00000637352 PHACTR3Q96KR7 559 aa11.09□□□□□ -0.63
SMARCA2-260ENST00000637352 NIP7Q9Y221 180 aaKnown RBP eCLIP11.09□□□□□ -0.63
SMARCA2-260ENST00000637352 SCN7AQ01118 1682 aa11.08□□□□□ -0.64
SMARCA2-260ENST00000637352 DICER1Q9UPY3 1922 aaKnown RBP11.08□□□□□ -0.64
SMARCA2-260ENST00000637352 GTF2E1P29083 439 aaPredicted RBP11.08□□□□□ -0.64
SMARCA2-260ENST00000637352 UBR2Q8IWV8 1755 aa11.08□□□□□ -0.64
SMARCA2-260ENST00000637352 VIRMAQ69YN4 1812 aaKnown RBP11.07□□□□□ -0.64
SMARCA2-260ENST00000637352 RASSF10A6NK89 507 aa11.07□□□□□ -0.64
SMARCA2-260ENST00000637352 DCTN1Q14203 1278 aa11.07□□□□□ -0.64
SMARCA2-260ENST00000637352 HLFQ16534 295 aa11.07□□□□□ -0.64
SMARCA2-260ENST00000637352 CYP4F22Q6NT55 531 aa11.07□□□□□ -0.64
SMARCA2-260ENST00000637352 TPTE2Q6XPS3 522 aa11.07□□□□□ -0.64
SMARCA2-260ENST00000637352 MCM10Q7L590 875 aa11.07□□□□□ -0.64
SMARCA2-260ENST00000637352 NUTM1Q86Y26 1132 aa11.07□□□□□ -0.64
SMARCA2-260ENST00000637352 CFAP44Q96MT7 982 aa11.07□□□□□ -0.64
SMARCA2-260ENST00000637352 KIF7Q2M1P5 1343 aa11.07□□□□□ -0.64
SMARCA2-260ENST00000637352 NBPF26B4DH59 902 aa11.06□□□□□ -0.64
SMARCA2-260ENST00000637352 FZD9O00144 591 aa11.06□□□□□ -0.64
SMARCA2-260ENST00000637352 TRAF5O00463 557 aa11.06□□□□□ -0.64
SMARCA2-260ENST00000637352 PRKAR2BP31323 418 aa11.06□□□□□ -0.64
SMARCA2-260ENST00000637352 EPS15P42566 896 aa11.06□□□□□ -0.64
SMARCA2-260ENST00000637352 MAP2K1Q02750 393 aaPredicted RBP11.06□□□□□ -0.64
SMARCA2-260ENST00000637352 NBPF10Q6P3W6 841 aaKnown RBP11.06□□□□□ -0.64
SMARCA2-260ENST00000637352 PNMA8AQ86V59 439 aaPredicted RBP11.06□□□□□ -0.64
SMARCA2-260ENST00000637352 RTKN2Q8IZC4 609 aa11.06□□□□□ -0.64
SMARCA2-260ENST00000637352 NBPF15Q8N660 670 aa11.06□□□□□ -0.64
SMARCA2-260ENST00000637352 DDX21Q9NR30 783 aaKnown RBP eCLIP11.06□□□□□ -0.64
SMARCA2-260ENST00000637352 ZNF652Q9Y2D9 606 aa11.06□□□□□ -0.64
SMARCA2-260ENST00000637352 AOC2O75106 756 aa11.05□□□□□ -0.64
SMARCA2-260ENST00000637352 SLC34A2O95436 690 aa11.05□□□□□ -0.64
SMARCA2-260ENST00000637352 EIF6P56537 245 aaKnown RBP11.05□□□□□ -0.64
SMARCA2-260ENST00000637352 CLEC4GQ6UXB4 293 aa11.05□□□□□ -0.64
SMARCA2-260ENST00000637352 JDP2Q8WYK2 163 aa11.05□□□□□ -0.64
SMARCA2-260ENST00000637352 CAPNS2Q96L46 248 aa11.05□□□□□ -0.64
SMARCA2-260ENST00000637352 MIS18AQ9NYP9 233 aa11.05□□□□□ -0.64
SMARCA2-260ENST00000637352 KLRG2A4D1S0 409 aaPredicted RBP11.04□□□□□ -0.64
SMARCA2-260ENST00000637352 PER1O15534 1290 aaPredicted RBP11.04□□□□□ -0.64
SMARCA2-260ENST00000637352 SNRPA1P09661 255 aaKnown RBP11.04□□□□□ -0.64
SMARCA2-260ENST00000637352 LMOD1P29536 600 aaPredicted RBP11.04□□□□□ -0.64
SMARCA2-260ENST00000637352 ALDH1B1P30837 517 aa11.04□□□□□ -0.64
SMARCA2-260ENST00000637352 GPC2Q8N158 579 aa11.04□□□□□ -0.64
SMARCA2-260ENST00000637352 GPR101Q96P66 508 aaPredicted RBP11.04□□□□□ -0.64
SMARCA2-260ENST00000637352 BEGAINQ9BUH8 593 aa11.04□□□□□ -0.64
SMARCA2-260ENST00000637352 CEMIPQ8WUJ3 1361 aa11.03□□□□□ -0.64
SMARCA2-260ENST00000637352 ABCC12Q96J65 1359 aa11.03□□□□□ -0.64
SMARCA2-260ENST00000637352 SCN4AP35499 1836 aa11.03□□□□□ -0.64
SMARCA2-260ENST00000637352 GPTP24298 496 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms