RNA–Protein interactions for RNA: ENST00000637189.1

CHRNA7-225, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 2

Gene CHRNA7, Length 6,181 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-225ENST00000637189 SF3B2Q13435 895 aaKnown RBP14.55□□□□□ -0.08
CHRNA7-225ENST00000637189 SMC1AQ14683 1233 aaKnown RBP14.55□□□□□ -0.08
CHRNA7-225ENST00000637189 MPRIPQ6WCQ1 1025 aa14.55□□□□□ -0.08
CHRNA7-225ENST00000637189 KCNH5Q8NCM2 988 aa14.55□□□□□ -0.08
CHRNA7-225ENST00000637189 TMOD3Q9NYL9 352 aa14.55□□□□□ -0.08
CHRNA7-225ENST00000637189 CETN2P41208 172 aa14.54□□□□□ -0.08
CHRNA7-225ENST00000637189 MKNK2Q9HBH9 465 aa14.54□□□□□ -0.08
CHRNA7-225ENST00000637189 SMAP1Q8IYB5 467 aaPredicted RBP14.54□□□□□ -0.08
CHRNA7-225ENST00000637189 TNPO1Q92973 898 aaKnown RBP14.54□□□□□ -0.08
CHRNA7-225ENST00000637189 SCLT1Q96NL6 688 aa14.54□□□□□ -0.08
CHRNA7-225ENST00000637189 CCT2P78371 535 aaKnown RBP14.54□□□□□ -0.08
CHRNA7-225ENST00000637189 TBC1D2Q9BYX2 928 aa14.54□□□□□ -0.08
CHRNA7-225ENST00000637189 SCAND2PQ9GZW5 306 aaPredicted RBP14.54□□□□□ -0.08
CHRNA7-225ENST00000637189 NAIPQ13075 1403 aa14.54□□□□□ -0.08
CHRNA7-225ENST00000637189 CAVIN4Q5BKX8 364 aa14.54□□□□□ -0.08
CHRNA7-225ENST00000637189 CERS3Q8IU89 383 aa14.54□□□□□ -0.08
CHRNA7-225ENST00000637189 PPP1R12BO60237 982 aaPredicted RBP14.54□□□□□ -0.08
CHRNA7-225ENST00000637189 PPFIA3O75145 1194 aa14.54□□□□□ -0.08
CHRNA7-225ENST00000637189 PRPF4BQ13523 1007 aaKnown RBP14.54□□□□□ -0.08
CHRNA7-225ENST00000637189 SPTY2D1Q68D10 685 aaPredicted RBP14.54□□□□□ -0.08
CHRNA7-225ENST00000637189 SH2B1Q9NRF2 756 aaPredicted RBP14.54□□□□□ -0.08
CHRNA7-225ENST00000637189 PRXQ9BXM0 1461 aa14.54□□□□□ -0.08
CHRNA7-225ENST00000637189 HSPA4P34932 840 aa14.53□□□□□ -0.08
CHRNA7-225ENST00000637189 RANBP6O60518 1105 aaKnown RBP14.53□□□□□ -0.08
CHRNA7-225ENST00000637189 CLCN1P35523 988 aa14.53□□□□□ -0.08
CHRNA7-225ENST00000637189 TMC6Q7Z403 805 aa14.53□□□□□ -0.08
CHRNA7-225ENST00000637189 MAATS1Q7Z4T9 603 aa14.53□□□□□ -0.08
CHRNA7-225ENST00000637189 MRC2Q9UBG0 1479 aa14.53□□□□□ -0.08
CHRNA7-225ENST00000637189 POLA1P09884 1462 aaPredicted RBP14.53□□□□□ -0.08
CHRNA7-225ENST00000637189 GCOM1H8Y6P7 765 aaPredicted RBP14.53□□□□□ -0.08
CHRNA7-225ENST00000637189 IVLP07476 585 aa14.53□□□□□ -0.08
CHRNA7-225ENST00000637189 MYZAPP0CAP1 466 aa14.53□□□□□ -0.08
CHRNA7-225ENST00000637189 SLC12A7Q9Y666 1083 aa14.53□□□□□ -0.08
CHRNA7-225ENST00000637189 KIF2AO00139 706 aaPredicted RBP14.52□□□□□ -0.08
CHRNA7-225ENST00000637189 PAFAH1B1P43034 410 aa14.52□□□□□ -0.08
CHRNA7-225ENST00000637189 CCDC96Q2M329 555 aa14.52□□□□□ -0.08
CHRNA7-225ENST00000637189 TRIM27P14373 513 aa14.52□□□□□ -0.08
CHRNA7-225ENST00000637189 RNF216Q9NWF9 866 aaPredicted RBP14.52□□□□□ -0.08
CHRNA7-225ENST00000637189 ARHGEF11O15085 1522 aa14.52□□□□□ -0.09
CHRNA7-225ENST00000637189 TSG101Q99816 390 aa14.52□□□□□ -0.09
CHRNA7-225ENST00000637189 LIMCH1Q9UPQ0 1083 aa14.52□□□□□ -0.09
CHRNA7-225ENST00000637189 IFT140Q96RY7 1462 aa14.52□□□□□ -0.09
CHRNA7-225ENST00000637189 ZNF213O14771 459 aa14.52□□□□□ -0.09
CHRNA7-225ENST00000637189 IFIT5Q13325 482 aaKnown RBP14.52□□□□□ -0.09
CHRNA7-225ENST00000637189 HOOK3Q86VS8 718 aa14.52□□□□□ -0.09
CHRNA7-225ENST00000637189 PANK2Q9BZ23 570 aa14.52□□□□□ -0.09
CHRNA7-225ENST00000637189 ANKIB1Q9P2G1 1089 aa14.52□□□□□ -0.09
CHRNA7-225ENST00000637189 CRACR2BQ8N4Y2 399 aaPredicted RBP14.51□□□□□ -0.09
CHRNA7-225ENST00000637189 GOLGA8BA8MQT2 603 aa14.51□□□□□ -0.09
CHRNA7-225ENST00000637189 RBM27Q9P2N5 1060 aaKnown RBP14.51□□□□□ -0.09
CHRNA7-225ENST00000637189 CTNNA2P26232 953 aa14.51□□□□□ -0.09
CHRNA7-225ENST00000637189 DZIP1Q86YF9 867 aaKnown RBP14.51□□□□□ -0.09
CHRNA7-225ENST00000637189 CEP83Q9Y592 693 aa14.51□□□□□ -0.09
CHRNA7-225ENST00000637189 ABCC11Q96J66 1382 aa14.51□□□□□ -0.09
CHRNA7-225ENST00000637189 TOP2BQ02880 1626 aa14.51□□□□□ -0.09
CHRNA7-225ENST00000637189 SSRP1Q08945 709 aaKnown RBP14.51□□□□□ -0.09
CHRNA7-225ENST00000637189 MAP3K12Q12852 859 aa14.51□□□□□ -0.09
CHRNA7-225ENST00000637189 TSHZ3Q63HK5 1081 aa14.51□□□□□ -0.09
CHRNA7-225ENST00000637189 CTCFLQ8NI51 663 aaPredicted RBP14.51□□□□□ -0.09
CHRNA7-225ENST00000637189 KIF4AO95239 1232 aa14.5□□□□□ -0.09
CHRNA7-225ENST00000637189 GJB2P29033 226 aa14.5□□□□□ -0.09
CHRNA7-225ENST00000637189 ZNF287Q9HBT7 754 aa14.5□□□□□ -0.09
CHRNA7-225ENST00000637189 HYPKQ9NX55 129 aa14.5□□□□□ -0.09
CHRNA7-225ENST00000637189 EPRSP07814 1512 aaKnown RBP14.5□□□□□ -0.09
CHRNA7-225ENST00000637189 LRPPRCP42704 1394 aaKnown RBP14.5□□□□□ -0.09
CHRNA7-225ENST00000637189 PLEKHH1Q9ULM0 1364 aa14.5□□□□□ -0.09
CHRNA7-225ENST00000637189 GOLGA8AA7E2F4 631 aa14.5□□□□□ -0.09
CHRNA7-225ENST00000637189 TFIP11Q9UBB9 837 aaKnown RBP14.5□□□□□ -0.09
CHRNA7-225ENST00000637189 ZNF652Q9Y2D9 606 aa14.5□□□□□ -0.09
CHRNA7-225ENST00000637189 COMMD10Q9Y6G5 202 aa14.5□□□□□ -0.09
CHRNA7-225ENST00000637189 TOPBP1Q92547 1522 aa14.5□□□□□ -0.09
CHRNA7-225ENST00000637189 HMGB1P09429 215 aaKnown RBP14.5□□□□□ -0.09
CHRNA7-225ENST00000637189 MSL1Q68DK7 614 aa14.5□□□□□ -0.09
CHRNA7-225ENST00000637189 CCDC144CPQ8IYA2 1237 aa14.5□□□□□ -0.09
CHRNA7-225ENST00000637189 TMOD2Q9NZR1 351 aa14.5□□□□□ -0.09
CHRNA7-225ENST00000637189 TRMT112Q9UI30 125 aaKnown RBP14.5□□□□□ -0.09
CHRNA7-225ENST00000637189 CCDC196A0A1B0GTZ2 297 aa14.5□□□□□ -0.09
CHRNA7-225ENST00000637189 CNNM3Q8NE01 707 aa14.5□□□□□ -0.09
CHRNA7-225ENST00000637189 USO1O60763 962 aaKnown RBP14.49□□□□□ -0.09
CHRNA7-225ENST00000637189 PRIMPOLQ96LW4 560 aa14.49□□□□□ -0.09
CHRNA7-225ENST00000637189 ZPR1O75312 459 aa14.49□□□□□ -0.09
CHRNA7-225ENST00000637189 TBC1D9Q6ZT07 1266 aa14.49□□□□□ -0.09
CHRNA7-225ENST00000637189 FSIP1Q8NA03 581 aa14.49□□□□□ -0.09
CHRNA7-225ENST00000637189 A0A1B0GUL7 405 aa14.49□□□□□ -0.09
CHRNA7-225ENST00000637189 IFIT3O14879 490 aaKnown RBP14.49□□□□□ -0.09
CHRNA7-225ENST00000637189 ADCY5O95622 1261 aa14.49□□□□□ -0.09
CHRNA7-225ENST00000637189 CCDC6Q16204 474 aa14.49□□□□□ -0.09
CHRNA7-225ENST00000637189 VPS36Q86VN1 386 aa14.49□□□□□ -0.09
CHRNA7-225ENST00000637189 ZNF830Q96NB3 372 aaPredicted RBP14.49□□□□□ -0.09
CHRNA7-225ENST00000637189 CCDC141Q6ZP82 1450 aa14.49□□□□□ -0.09
CHRNA7-225ENST00000637189 YEATS4O95619 227 aa14.49□□□□□ -0.09
CHRNA7-225ENST00000637189 MCM3P25205 808 aa14.49□□□□□ -0.09
CHRNA7-225ENST00000637189 SLC5A1P13866 664 aa14.48□□□□□ -0.09
CHRNA7-225ENST00000637189 SETSIPP0DME0 302 aa14.48□□□□□ -0.09
CHRNA7-225ENST00000637189 CAPN2P17655 700 aa14.48□□□□□ -0.09
CHRNA7-225ENST00000637189 AMOTQ4VCS5 1084 aa14.48□□□□□ -0.09
CHRNA7-225ENST00000637189 A0A087WZG4 1122 aa14.48□□□□□ -0.09
CHRNA7-225ENST00000637189 NOP2P46087 812 aaKnown RBP14.48□□□□□ -0.09
CHRNA7-225ENST00000637189 NLRP5P59047 1200 aa14.48□□□□□ -0.09
CHRNA7-225ENST00000637189 FLIIQ13045 1269 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms