RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 WDR33Q9C0J8 1336 aaKnown RBP16.89■□□□□ 0.29
CACNA1A-228ENST00000636610 THEMISQ8N1K5 641 aaPredicted RBP16.89■□□□□ 0.29
CACNA1A-228ENST00000636610 STX6O43752 255 aa16.88■□□□□ 0.29
CACNA1A-228ENST00000636610 OFD1O75665 1012 aa16.88■□□□□ 0.29
CACNA1A-228ENST00000636610 NOL7Q9UMY1 257 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-228ENST00000636610 TCHHQ07283 1943 aa16.88■□□□□ 0.29
CACNA1A-228ENST00000636610 GJB2P29033 226 aa16.88■□□□□ 0.29
CACNA1A-228ENST00000636610 POLA2Q14181 598 aa16.88■□□□□ 0.29
CACNA1A-228ENST00000636610 ORAI2Q96SN7 254 aa16.88■□□□□ 0.29
CACNA1A-228ENST00000636610 TAF6LQ9Y6J9 622 aa16.88■□□□□ 0.29
CACNA1A-228ENST00000636610 TSC1Q92574 1164 aa16.88■□□□□ 0.29
CACNA1A-228ENST00000636610 INTS4Q96HW7 963 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-228ENST00000636610 PDLIM2Q96JY6 352 aa16.88■□□□□ 0.29
CACNA1A-228ENST00000636610 RAB11FIP3O75154 756 aa16.87■□□□□ 0.29
CACNA1A-228ENST00000636610 TTC12Q9H892 705 aaPredicted RBP16.87■□□□□ 0.29
CACNA1A-228ENST00000636610 LIMCH1Q9UPQ0 1083 aa16.87■□□□□ 0.29
CACNA1A-228ENST00000636610 ZC3H6P61129 1189 aaKnown RBP16.87■□□□□ 0.29
CACNA1A-228ENST00000636610 C1orf141Q5JVX7 400 aa16.87■□□□□ 0.29
CACNA1A-228ENST00000636610 PDRG1Q9NUG6 133 aa16.86■□□□□ 0.29
CACNA1A-228ENST00000636610 ZKSCAN5Q9Y2L8 839 aa16.86■□□□□ 0.29
CACNA1A-228ENST00000636610 RPAP1Q9BWH6 1393 aaPredicted RBP16.86■□□□□ 0.29
CACNA1A-228ENST00000636610 UBR1Q8IWV7 1749 aa16.86■□□□□ 0.29
CACNA1A-228ENST00000636610 FAM177BA6PVY3 158 aa16.86■□□□□ 0.29
CACNA1A-228ENST00000636610 ZSCAN22P10073 491 aaPredicted RBP16.86■□□□□ 0.29
CACNA1A-228ENST00000636610 FOSBP53539 338 aa16.86■□□□□ 0.29
CACNA1A-228ENST00000636610 CAMK4Q16566 473 aa16.86■□□□□ 0.29
CACNA1A-228ENST00000636610 IP6K1Q92551 441 aa16.86■□□□□ 0.29
CACNA1A-228ENST00000636610 RGPD1P0DJD0 1748 aa16.85■□□□□ 0.29
CACNA1A-228ENST00000636610 ADCY9O60503 1353 aa16.85■□□□□ 0.29
CACNA1A-228ENST00000636610 SYAP1Q96A49 352 aaPredicted RBP16.85■□□□□ 0.29
CACNA1A-228ENST00000636610 GLRX3O76003 335 aaKnown RBP16.85■□□□□ 0.29
CACNA1A-228ENST00000636610 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.85■□□□□ 0.29
CACNA1A-228ENST00000636610 SUCLG2Q96I99 432 aa16.85■□□□□ 0.29
CACNA1A-228ENST00000636610 TTC14Q96N46 770 aa16.85■□□□□ 0.29
CACNA1A-228ENST00000636610 BICC1Q9H694 974 aaKnown RBP16.85■□□□□ 0.29
CACNA1A-228ENST00000636610 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.85■□□□□ 0.29
CACNA1A-228ENST00000636610 UQCRHLA0A096LP55 91 aa16.84■□□□□ 0.29
CACNA1A-228ENST00000636610 UQCRHP07919 91 aa16.84■□□□□ 0.29
CACNA1A-228ENST00000636610 EAF2Q96CJ1 260 aaPredicted RBP16.84■□□□□ 0.29
CACNA1A-228ENST00000636610 ECHDC1Q9NTX5 307 aa16.84■□□□□ 0.29
CACNA1A-228ENST00000636610 DIP2AQ14689 1571 aa16.84■□□□□ 0.29
CACNA1A-228ENST00000636610 SPC24Q8NBT2 197 aa16.84■□□□□ 0.29
CACNA1A-228ENST00000636610 NMIQ13287 307 aaPredicted RBP16.83■□□□□ 0.29
CACNA1A-228ENST00000636610 ME3Q16798 604 aa16.83■□□□□ 0.29
CACNA1A-228ENST00000636610 HYPKQ9NX55 129 aa16.83■□□□□ 0.29
CACNA1A-228ENST00000636610 TFIP11Q9UBB9 837 aaKnown RBP16.83■□□□□ 0.29
CACNA1A-228ENST00000636610 DBF4Q9UBU7 674 aaPredicted RBP16.83■□□□□ 0.29
CACNA1A-228ENST00000636610 AXIN2Q9Y2T1 843 aa16.83■□□□□ 0.29
CACNA1A-228ENST00000636610 F13A1P00488 732 aa16.83■□□□□ 0.28
CACNA1A-228ENST00000636610 TAOK2Q9UL54 1235 aa16.83■□□□□ 0.28
CACNA1A-228ENST00000636610 RBM8AQ9Y5S9 174 aaKnown RBP16.83■□□□□ 0.28
CACNA1A-228ENST00000636610 FSD1Q9BTV5 496 aa16.83■□□□□ 0.28
CACNA1A-228ENST00000636610 PIK3C2AO00443 1686 aa16.82■□□□□ 0.28
CACNA1A-228ENST00000636610 ADCY5O95622 1261 aa16.82■□□□□ 0.28
CACNA1A-228ENST00000636610 G3BP1Q13283 466 aaKnown RBP eCLIP16.82■□□□□ 0.28
CACNA1A-228ENST00000636610 RIC3Q7Z5B4 369 aa16.82■□□□□ 0.28
CACNA1A-228ENST00000636610 BCL11BQ9C0K0 894 aaPredicted RBP16.82■□□□□ 0.28
CACNA1A-228ENST00000636610 CCDC39Q9UFE4 941 aa16.82■□□□□ 0.28
CACNA1A-228ENST00000636610 CYP46A1Q9Y6A2 500 aa16.82■□□□□ 0.28
CACNA1A-228ENST00000636610 RNMTO43148 476 aaKnown RBP16.82■□□□□ 0.28
CACNA1A-228ENST00000636610 PLEKHO1Q53GL0 409 aaPredicted RBP16.82■□□□□ 0.28
CACNA1A-228ENST00000636610 DDX17Q92841 729 aaKnown RBP16.82■□□□□ 0.28
CACNA1A-228ENST00000636610 A0A0D9SFI3 127 aa16.81■□□□□ 0.28
CACNA1A-228ENST00000636610 RRP9O43818 475 aaKnown RBP16.81■□□□□ 0.28
CACNA1A-228ENST00000636610 GIGYF1O75420 1035 aaPredicted RBP16.81■□□□□ 0.28
CACNA1A-228ENST00000636610 SASH1O94885 1247 aa16.81■□□□□ 0.28
CACNA1A-228ENST00000636610 TPCN1Q9ULQ1 816 aa16.81■□□□□ 0.28
CACNA1A-228ENST00000636610 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.81■□□□□ 0.28
CACNA1A-228ENST00000636610 GCP02774 474 aa16.81■□□□□ 0.28
CACNA1A-228ENST00000636610 LRRC2Q9BYS8 371 aa16.81■□□□□ 0.28
CACNA1A-228ENST00000636610 TPM2P07951 284 aa16.8■□□□□ 0.28
CACNA1A-228ENST00000636610 SLFNL1Q499Z3 407 aa16.8■□□□□ 0.28
CACNA1A-228ENST00000636610 ANKRD24Q8TF21 1146 aa16.8■□□□□ 0.28
CACNA1A-228ENST00000636610 ST3GAL1Q11201 340 aa16.8■□□□□ 0.28
CACNA1A-228ENST00000636610 LARP1BQ659C4 914 aaKnown RBP16.8■□□□□ 0.28
CACNA1A-228ENST00000636610 ATP5J2-PTCD1G3V325 749 aa16.8■□□□□ 0.28
CACNA1A-228ENST00000636610 PTCD1O75127 700 aaKnown RBP16.8■□□□□ 0.28
CACNA1A-228ENST00000636610 CEBPZQ03701 1054 aaKnown RBP16.8■□□□□ 0.28
CACNA1A-228ENST00000636610 AKAP4Q5JQC9 854 aa16.8■□□□□ 0.28
CACNA1A-228ENST00000636610 KSR2Q6VAB6 950 aa16.8■□□□□ 0.28
CACNA1A-228ENST00000636610 CKAP2LQ8IYA6 745 aa16.8■□□□□ 0.28
CACNA1A-228ENST00000636610 DDX11Q96FC9 970 aa16.8■□□□□ 0.28
CACNA1A-228ENST00000636610 KAZALD1Q96I82 304 aa16.8■□□□□ 0.28
CACNA1A-228ENST00000636610 ZKSCAN1P17029 563 aaPredicted RBP16.79■□□□□ 0.28
CACNA1A-228ENST00000636610 HSP90AB4PQ58FF6 505 aa16.79■□□□□ 0.28
CACNA1A-228ENST00000636610 CCDC183Q5T5S1 534 aa16.79■□□□□ 0.28
CACNA1A-228ENST00000636610 CREB3L3Q68CJ9 461 aa16.79■□□□□ 0.28
CACNA1A-228ENST00000636610 RUFY2Q8WXA3 655 aa16.79■□□□□ 0.28
CACNA1A-228ENST00000636610 EPHA10Q5JZY3 1008 aa16.79■□□□□ 0.28
CACNA1A-228ENST00000636610 CCDC129Q6ZRS4 1044 aa16.79■□□□□ 0.28
CACNA1A-228ENST00000636610 CDC37L1Q7L3B6 337 aa16.79■□□□□ 0.28
CACNA1A-228ENST00000636610 ZNF589Q86UQ0 364 aaPredicted RBP16.79■□□□□ 0.28
CACNA1A-228ENST00000636610 DNAJC2Q99543 621 aaKnown RBP16.79■□□□□ 0.28
CACNA1A-228ENST00000636610 NLRP2Q9NX02 1062 aa16.79■□□□□ 0.28
CACNA1A-228ENST00000636610 NALCNQ8IZF0 1738 aa16.79■□□□□ 0.28
CACNA1A-228ENST00000636610 FMN2Q9NZ56 1722 aa16.79■□□□□ 0.28
CACNA1A-228ENST00000636610 NWD1Q149M9 1564 aa16.78■□□□□ 0.28
CACNA1A-228ENST00000636610 GRM8O00222 908 aa16.78■□□□□ 0.28
CACNA1A-228ENST00000636610 PHF14O94880 888 aa16.78■□□□□ 0.28
CACNA1A-228ENST00000636610 GPATCH3Q96I76 525 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms