RNA–Protein interactions for RNA: ENST00000635822.2

TCF4-276, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 7,805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-276ENST00000635822 ZSCAN26Q16670 478 aa13.4□□□□□ -0.26
TCF4-276ENST00000635822 SPECC1LQ69YQ0 1117 aa13.4□□□□□ -0.26
TCF4-276ENST00000635822 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.4□□□□□ -0.26
TCF4-276ENST00000635822 SMC1AQ14683 1233 aaKnown RBP13.4□□□□□ -0.26
TCF4-276ENST00000635822 PPM1EQ8WY54 764 aa13.4□□□□□ -0.26
TCF4-276ENST00000635822 UTP14AQ9BVJ6 771 aaKnown RBP13.4□□□□□ -0.26
TCF4-276ENST00000635822 RLBP1P12271 317 aa13.4□□□□□ -0.26
TCF4-276ENST00000635822 CCDC158Q5M9N0 1113 aa13.4□□□□□ -0.26
TCF4-276ENST00000635822 IFNKQ9P0W0 207 aa13.4□□□□□ -0.26
TCF4-276ENST00000635822 ERCC6Q03468 1493 aa13.4□□□□□ -0.26
TCF4-276ENST00000635822 TDRD12Q587J7 1177 aaKnown RBP13.4□□□□□ -0.26
TCF4-276ENST00000635822 HDXQ7Z353 690 aa13.4□□□□□ -0.26
TCF4-276ENST00000635822 PPP2R3AQ06190 1150 aa13.39□□□□□ -0.27
TCF4-276ENST00000635822 CEP112Q8N8E3 955 aa13.39□□□□□ -0.27
TCF4-276ENST00000635822 OAS2P29728 719 aaKnown RBP13.39□□□□□ -0.27
TCF4-276ENST00000635822 JPH4Q96JJ6 628 aa13.39□□□□□ -0.27
TCF4-276ENST00000635822 DHX29Q7Z478 1369 aaKnown RBP13.39□□□□□ -0.27
TCF4-276ENST00000635822 NEBLO76041 1014 aa13.39□□□□□ -0.27
TCF4-276ENST00000635822 MAP2K2P36507 400 aa13.39□□□□□ -0.27
TCF4-276ENST00000635822 RRS1Q15050 365 aaKnown RBP13.39□□□□□ -0.27
TCF4-276ENST00000635822 ZNF500O60304 480 aaPredicted RBP13.39□□□□□ -0.27
TCF4-276ENST00000635822 NFE2L2Q16236 605 aa13.39□□□□□ -0.27
TCF4-276ENST00000635822 SPINK5Q9NQ38 1064 aaPredicted RBP13.39□□□□□ -0.27
TCF4-276ENST00000635822 SERPINA10Q9UK55 444 aa13.39□□□□□ -0.27
TCF4-276ENST00000635822 SYNJ1O43426 1573 aa13.38□□□□□ -0.27
TCF4-276ENST00000635822 MYL6BP14649 208 aa13.38□□□□□ -0.27
TCF4-276ENST00000635822 ANKRD18AQ8IVF6 992 aa13.38□□□□□ -0.27
TCF4-276ENST00000635822 RAB11FIP4Q86YS3 637 aa13.38□□□□□ -0.27
TCF4-276ENST00000635822 CARD6Q9BX69 1037 aa13.38□□□□□ -0.27
TCF4-276ENST00000635822 NAA15Q9BXJ9 866 aaKnown RBP13.38□□□□□ -0.27
TCF4-276ENST00000635822 TMX4Q9H1E5 349 aaPredicted RBP13.38□□□□□ -0.27
TCF4-276ENST00000635822 MAPKBP1O60336 1514 aa13.38□□□□□ -0.27
TCF4-276ENST00000635822 GCOM1H8Y6P7 765 aaPredicted RBP13.38□□□□□ -0.27
TCF4-276ENST00000635822 MYZAPP0CAP1 466 aa13.38□□□□□ -0.27
TCF4-276ENST00000635822 CLNS1AP54105 237 aaKnown RBP13.38□□□□□ -0.27
TCF4-276ENST00000635822 MCM10Q7L590 875 aa13.38□□□□□ -0.27
TCF4-276ENST00000635822 GIGYF2Q6Y7W6 1299 aaKnown RBP13.38□□□□□ -0.27
TCF4-276ENST00000635822 RSRC1Q96IZ7 334 aaKnown RBP13.38□□□□□ -0.27
TCF4-276ENST00000635822 CCDC8Q9H0W5 538 aaPredicted RBP13.38□□□□□ -0.27
TCF4-276ENST00000635822 ANKRD30BQ9BXX2 1392 aa13.38□□□□□ -0.27
TCF4-276ENST00000635822 MYCBPQ99417 103 aaPredicted RBP13.38□□□□□ -0.27
TCF4-276ENST00000635822 UBAC1Q9BSL1 405 aa13.38□□□□□ -0.27
TCF4-276ENST00000635822 ZNF569Q5MCW4 686 aa13.37□□□□□ -0.27
TCF4-276ENST00000635822 FKBP15Q5T1M5 1219 aa13.37□□□□□ -0.27
TCF4-276ENST00000635822 FAM76AQ8TAV0 307 aa13.37□□□□□ -0.27
TCF4-276ENST00000635822 TMCO5BA8MYB1 307 aa13.37□□□□□ -0.27
TCF4-276ENST00000635822 CEP131Q9UPN4 1083 aa13.37□□□□□ -0.27
TCF4-276ENST00000635822 GSTTP1A0A1W2PQM5 241 aa13.37□□□□□ -0.27
TCF4-276ENST00000635822 CCDC160A6NGH7 325 aa13.37□□□□□ -0.27
TCF4-276ENST00000635822 PRPF4BQ13523 1007 aaKnown RBP13.37□□□□□ -0.27
TCF4-276ENST00000635822 KIF4AO95239 1232 aa13.37□□□□□ -0.27
TCF4-276ENST00000635822 CCDC6Q16204 474 aa13.37□□□□□ -0.27
TCF4-276ENST00000635822 TMEM63CQ9P1W3 806 aa13.37□□□□□ -0.27
TCF4-276ENST00000635822 CLGNO14967 610 aa13.36□□□□□ -0.27
TCF4-276ENST00000635822 OPA1O60313 960 aa13.36□□□□□ -0.27
TCF4-276ENST00000635822 PPP1R9BQ96SB3 815 aa13.36□□□□□ -0.27
TCF4-276ENST00000635822 U3KPZ7 1027 aaPredicted RBP13.36□□□□□ -0.27
TCF4-276ENST00000635822 A0A1B0GUA9 196 aa13.36□□□□□ -0.27
TCF4-276ENST00000635822 FCHSD2O94868 740 aa13.36□□□□□ -0.27
TCF4-276ENST00000635822 SSR1P43307 286 aaKnown RBP13.36□□□□□ -0.27
TCF4-276ENST00000635822 CCDC144CPQ8IYA2 1237 aa13.36□□□□□ -0.27
TCF4-276ENST00000635822 ALS2CR12Q96Q35 445 aa13.36□□□□□ -0.27
TCF4-276ENST00000635822 GADD45BO75293 160 aaPredicted RBP13.36□□□□□ -0.27
TCF4-276ENST00000635822 INPP5BP32019 993 aa13.36□□□□□ -0.27
TCF4-276ENST00000635822 UTP14CQ5TAP6 766 aaKnown RBP13.36□□□□□ -0.27
TCF4-276ENST00000635822 LMBRD1Q9NUN5 540 aa13.36□□□□□ -0.27
TCF4-276ENST00000635822 PIP4K2BP78356 416 aa13.36□□□□□ -0.27
TCF4-276ENST00000635822 AFAP1L1Q8TED9 768 aa13.36□□□□□ -0.27
TCF4-276ENST00000635822 LRRC2Q9BYS8 371 aa13.36□□□□□ -0.27
TCF4-276ENST00000635822 CABP1Q9NZU7 370 aa13.36□□□□□ -0.27
TCF4-276ENST00000635822 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.36□□□□□ -0.272e-6■■■■□ 26.4
TCF4-276ENST00000635822 DTNBO60941 627 aa13.36□□□□□ -0.27
TCF4-276ENST00000635822 SYKP43405 635 aa13.35□□□□□ -0.27
TCF4-276ENST00000635822 ARID4AP29374 1257 aaPredicted RBP13.35□□□□□ -0.27
TCF4-276ENST00000635822 EID1Q9Y6B2 187 aa13.35□□□□□ -0.27
TCF4-276ENST00000635822 N4BP3O15049 544 aa13.35□□□□□ -0.27
TCF4-276ENST00000635822 CKAP4Q07065 602 aaKnown RBP13.35□□□□□ -0.27
TCF4-276ENST00000635822 FBF1Q8TES7 1133 aa13.35□□□□□ -0.27
TCF4-276ENST00000635822 PRAM1Q96QH2 718 aa13.35□□□□□ -0.27
TCF4-276ENST00000635822 NOP2P46087 812 aaKnown RBP13.35□□□□□ -0.27
TCF4-276ENST00000635822 CTNNA3Q9UI47 895 aa13.35□□□□□ -0.27
TCF4-276ENST00000635822 SUPT6HQ7KZ85 1726 aaKnown RBP13.35□□□□□ -0.27
TCF4-276ENST00000635822 MYO1BO43795 1136 aa13.35□□□□□ -0.27
TCF4-276ENST00000635822 STAC3Q96MF2 364 aa13.34□□□□□ -0.27
TCF4-276ENST00000635822 ESYT1Q9BSJ8 1104 aa13.34□□□□□ -0.27
TCF4-276ENST00000635822 KDM2BQ8NHM5 1336 aa13.34□□□□□ -0.27
TCF4-276ENST00000635822 CCDC96Q2M329 555 aa13.34□□□□□ -0.27
TCF4-276ENST00000635822 CEP63Q96MT8 703 aa13.34□□□□□ -0.27
TCF4-276ENST00000635822 USP16Q9Y5T5 823 aa13.34□□□□□ -0.27
TCF4-276ENST00000635822 GOLGA8BA8MQT2 603 aa13.34□□□□□ -0.27
TCF4-276ENST00000635822 CPLX4Q7Z7G2 160 aa13.34□□□□□ -0.27
TCF4-276ENST00000635822 ANKS4BQ8N8V4 417 aa13.34□□□□□ -0.27
TCF4-276ENST00000635822 PAIP2Q9BPZ3 127 aaKnown RBP13.34□□□□□ -0.27
TCF4-276ENST00000635822 ZSCAN16Q9H4T2 348 aaPredicted RBP13.34□□□□□ -0.27
TCF4-276ENST00000635822 CNNM1Q9NRU3 951 aa13.34□□□□□ -0.27
TCF4-276ENST00000635822 CCDC102BQ68D86 513 aa13.34□□□□□ -0.27
TCF4-276ENST00000635822 GUCA1BQ9UMX6 200 aa13.34□□□□□ -0.27
TCF4-276ENST00000635822 MARCKSP29966 332 aaPredicted RBP13.33□□□□□ -0.27
TCF4-276ENST00000635822 MTIF2P46199 727 aaKnown RBP13.33□□□□□ -0.27
TCF4-276ENST00000635822 IKQ13123 557 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms