RNA–Protein interactions for RNA: ENST00000635257.1

GPATCH8-211, Transcript of G-patch domain containing 8, humanhuman

TSL 5

Gene GPATCH8, Length 5,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-211ENST00000635257 MIS18AQ9NYP9 233 aa13.24□□□□□ -0.29
GPATCH8-211ENST00000635257 ABCC11Q96J66 1382 aa13.24□□□□□ -0.29
GPATCH8-211ENST00000635257 NOP2P46087 812 aaKnown RBP13.24□□□□□ -0.29
GPATCH8-211ENST00000635257 PRPF4BQ13523 1007 aaKnown RBP13.23□□□□□ -0.29
GPATCH8-211ENST00000635257 IFI16Q16666 785 aaKnown RBP13.23□□□□□ -0.29
GPATCH8-211ENST00000635257 DDX12PQ92771 950 aa13.23□□□□□ -0.29
GPATCH8-211ENST00000635257 LMAN1P49257 510 aa13.23□□□□□ -0.29
GPATCH8-211ENST00000635257 TAF7Q15545 349 aaPredicted RBP13.23□□□□□ -0.29
GPATCH8-211ENST00000635257 SLF2Q8IX21 1173 aa13.23□□□□□ -0.29
GPATCH8-211ENST00000635257 SSH1Q8WYL5 1049 aa13.23□□□□□ -0.29
GPATCH8-211ENST00000635257 TBC1D2Q9BYX2 928 aa13.23□□□□□ -0.29
GPATCH8-211ENST00000635257 STX6O43752 255 aa13.23□□□□□ -0.29
GPATCH8-211ENST00000635257 FERP16591 822 aa13.23□□□□□ -0.29
GPATCH8-211ENST00000635257 GJB2P29033 226 aa13.23□□□□□ -0.29
GPATCH8-211ENST00000635257 TCERG1LQ5VWI1 586 aa13.23□□□□□ -0.29
GPATCH8-211ENST00000635257 EVI5LQ96CN4 794 aa13.23□□□□□ -0.29
GPATCH8-211ENST00000635257 LRRC27Q9C0I9 530 aa13.23□□□□□ -0.29
GPATCH8-211ENST00000635257 CCDC8Q9H0W5 538 aaPredicted RBP13.23□□□□□ -0.29
GPATCH8-211ENST00000635257 BIN1O00499 593 aa13.23□□□□□ -0.29
GPATCH8-211ENST00000635257 ZNF165P49910 485 aa13.23□□□□□ -0.29
GPATCH8-211ENST00000635257 CEP135Q66GS9 1140 aa13.23□□□□□ -0.29
GPATCH8-211ENST00000635257 MCM10Q7L590 875 aa13.23□□□□□ -0.29
GPATCH8-211ENST00000635257 TRERF1Q96PN7 1200 aa13.23□□□□□ -0.29
GPATCH8-211ENST00000635257 COMMD10Q9Y6G5 202 aa13.23□□□□□ -0.29
GPATCH8-211ENST00000635257 CCT2P78371 535 aaKnown RBP13.22□□□□□ -0.29
GPATCH8-211ENST00000635257 GRIPAP1Q4V328 841 aa13.22□□□□□ -0.29
GPATCH8-211ENST00000635257 PRIMPOLQ96LW4 560 aa13.22□□□□□ -0.29
GPATCH8-211ENST00000635257 FERMT1Q9BQL6 677 aa13.22□□□□□ -0.29
GPATCH8-211ENST00000635257 JADE2Q9NQC1 790 aa13.22□□□□□ -0.29
GPATCH8-211ENST00000635257 NSD3Q9BZ95 1437 aa13.22□□□□□ -0.29
GPATCH8-211ENST00000635257 TTC21AQ8NDW8 1320 aa13.22□□□□□ -0.29
GPATCH8-211ENST00000635257 HSF2BPO75031 334 aa13.22□□□□□ -0.29
GPATCH8-211ENST00000635257 IARSP41252 1262 aaKnown RBP13.22□□□□□ -0.29
GPATCH8-211ENST00000635257 DYNC1I1O14576 645 aa13.22□□□□□ -0.29
GPATCH8-211ENST00000635257 CCDC102BQ68D86 513 aa13.22□□□□□ -0.29
GPATCH8-211ENST00000635257 TSNARE1Q96NA8 513 aa13.22□□□□□ -0.29
GPATCH8-211ENST00000635257 GOLIM4O00461 696 aa13.21□□□□□ -0.29
GPATCH8-211ENST00000635257 PRC1O43663 620 aa13.21□□□□□ -0.29
GPATCH8-211ENST00000635257 IDEP14735 1019 aa13.21□□□□□ -0.29
GPATCH8-211ENST00000635257 KIF5BP33176 963 aa13.21□□□□□ -0.29
GPATCH8-211ENST00000635257 GNG11P61952 73 aa13.21□□□□□ -0.29
GPATCH8-211ENST00000635257 TFIP11Q9UBB9 837 aaKnown RBP13.21□□□□□ -0.29
GPATCH8-211ENST00000635257 PLEKHH2Q8IVE3 1493 aa13.21□□□□□ -0.29
GPATCH8-211ENST00000635257 C9orf84Q5VXU9 1444 aa13.21□□□□□ -0.29
GPATCH8-211ENST00000635257 ANKIB1Q9P2G1 1089 aa13.21□□□□□ -0.29
GPATCH8-211ENST00000635257 UBE2HP62256 183 aa13.21□□□□□ -0.29
GPATCH8-211ENST00000635257 IPO4Q8TEX9 1081 aaKnown RBP13.21□□□□□ -0.29
GPATCH8-211ENST00000635257 USP16Q9Y5T5 823 aa13.21□□□□□ -0.29
GPATCH8-211ENST00000635257 ACTN2P35609 894 aa13.21□□□□□ -0.3
GPATCH8-211ENST00000635257 CKAP4Q07065 602 aaKnown RBP13.21□□□□□ -0.3
GPATCH8-211ENST00000635257 CCDC155Q8N6L0 562 aa13.21□□□□□ -0.3
GPATCH8-211ENST00000635257 TMOD3Q9NYL9 352 aa13.21□□□□□ -0.3
GPATCH8-211ENST00000635257 IKBKGQ9Y6K9 419 aa13.21□□□□□ -0.3
GPATCH8-211ENST00000635257 ZPR1O75312 459 aa13.21□□□□□ -0.3
GPATCH8-211ENST00000635257 CCDC172P0C7W6 258 aa13.21□□□□□ -0.3
GPATCH8-211ENST00000635257 UBA7P41226 1012 aa13.21□□□□□ -0.3
GPATCH8-211ENST00000635257 KIAA0753Q2KHM9 967 aa13.21□□□□□ -0.3
GPATCH8-211ENST00000635257 AMOTQ4VCS5 1084 aa13.21□□□□□ -0.3
GPATCH8-211ENST00000635257 DNAAF4Q8WXU2 420 aa13.21□□□□□ -0.3
GPATCH8-211ENST00000635257 SYNJ2O15056 1496 aa13.2□□□□□ -0.3
GPATCH8-211ENST00000635257 SPTY2D1Q68D10 685 aaPredicted RBP13.2□□□□□ -0.3
GPATCH8-211ENST00000635257 THUMPD2Q9BTF0 503 aaKnown RBP13.2□□□□□ -0.3
GPATCH8-211ENST00000635257 CCDC61Q9Y6R9 512 aa13.2□□□□□ -0.3
GPATCH8-211ENST00000635257 CCDC171Q6TFL3 1326 aa13.2□□□□□ -0.3
GPATCH8-211ENST00000635257 WDHD1O75717 1129 aaPredicted RBP13.2□□□□□ -0.3
GPATCH8-211ENST00000635257 ANKLE2Q86XL3 938 aa13.2□□□□□ -0.3
GPATCH8-211ENST00000635257 FBF1Q8TES7 1133 aa13.2□□□□□ -0.3
GPATCH8-211ENST00000635257 NUDT16Q96DE0 195 aaKnown RBP13.2□□□□□ -0.3
GPATCH8-211ENST00000635257 TTF1Q15361 905 aaPredicted RBP13.2□□□□□ -0.3
GPATCH8-211ENST00000635257 CCDC184Q52MB2 194 aa13.2□□□□□ -0.3
GPATCH8-211ENST00000635257 CHMP4BP1P59074 171 aa13.2□□□□□ -0.3
GPATCH8-211ENST00000635257 GPATCH11Q8N954 259 aa13.2□□□□□ -0.3
GPATCH8-211ENST00000635257 PPP1R14CQ8TAE6 165 aa13.19□□□□□ -0.3
GPATCH8-211ENST00000635257 NKTRP30414 1462 aaKnown RBP13.19□□□□□ -0.3
GPATCH8-211ENST00000635257 PTCD1O75127 700 aaKnown RBP13.19□□□□□ -0.3
GPATCH8-211ENST00000635257 PLVAPQ9BX97 442 aa13.19□□□□□ -0.3
GPATCH8-211ENST00000635257 ECHDC1Q9NTX5 307 aa13.19□□□□□ -0.3
GPATCH8-211ENST00000635257 RMND1Q9NWS8 449 aa13.19□□□□□ -0.3
GPATCH8-211ENST00000635257 HYPKQ9NX55 129 aa13.19□□□□□ -0.3
GPATCH8-211ENST00000635257 RAD54L2Q9Y4B4 1467 aa13.19□□□□□ -0.3
GPATCH8-211ENST00000635257 HSPA4P34932 840 aa13.19□□□□□ -0.3
GPATCH8-211ENST00000635257 ZC3H6P61129 1189 aaKnown RBP13.19□□□□□ -0.3
GPATCH8-211ENST00000635257 TMEM67Q5HYA8 995 aa13.19□□□□□ -0.3
GPATCH8-211ENST00000635257 GDPD2Q9HCC8 539 aa13.19□□□□□ -0.3
GPATCH8-211ENST00000635257 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.19□□□□□ -0.38e-7■■■■□ 21.2
GPATCH8-211ENST00000635257 MYO1BO43795 1136 aa13.19□□□□□ -0.3
GPATCH8-211ENST00000635257 ZSCAN16Q9H4T2 348 aaPredicted RBP13.19□□□□□ -0.3
GPATCH8-211ENST00000635257 ORC3Q9UBD5 711 aaPredicted RBP13.19□□□□□ -0.3
GPATCH8-211ENST00000635257 CFTRP13569 1480 aa13.19□□□□□ -0.3
GPATCH8-211ENST00000635257 N4BP3O15049 544 aa13.19□□□□□ -0.3
GPATCH8-211ENST00000635257 SYCP3Q8IZU3 236 aa13.19□□□□□ -0.3
GPATCH8-211ENST00000635257 AKR1B10O60218 316 aa13.18□□□□□ -0.3
GPATCH8-211ENST00000635257 LIG1P18858 919 aa13.18□□□□□ -0.3
GPATCH8-211ENST00000635257 HMG20BQ9P0W2 317 aa13.18□□□□□ -0.3
GPATCH8-211ENST00000635257 TRMT112Q9UI30 125 aaKnown RBP13.18□□□□□ -0.3
GPATCH8-211ENST00000635257 PTPRCP08575 1304 aa13.18□□□□□ -0.3
GPATCH8-211ENST00000635257 DHX29Q7Z478 1369 aaKnown RBP13.18□□□□□ -0.3
GPATCH8-211ENST00000635257 KLHL40Q2TBA0 621 aa13.18□□□□□ -0.3
GPATCH8-211ENST00000635257 SREK1Q8WXA9 508 aaKnown RBP13.18□□□□□ -0.3
GPATCH8-211ENST00000635257 MNAT1P51948 309 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 216.6 ms