RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 LRP5O75197 1615 aa17.64■□□□□ 0.41
LIMS4-204ENST00000632897 NEXNQ0ZGT2 675 aa17.63■□□□□ 0.41
LIMS4-204ENST00000632897 RIC3Q7Z5B4 369 aa17.63■□□□□ 0.41
LIMS4-204ENST00000632897 RAB11FIP3O75154 756 aa17.63■□□□□ 0.41
LIMS4-204ENST00000632897 NBPF7P0C2Y1 421 aaPredicted RBP17.63■□□□□ 0.41
LIMS4-204ENST00000632897 MYL6BP14649 208 aa17.63■□□□□ 0.41
LIMS4-204ENST00000632897 AIMP1Q12904 312 aaKnown RBP17.63■□□□□ 0.41
LIMS4-204ENST00000632897 MTX1Q13505 466 aa17.63■□□□□ 0.41
LIMS4-204ENST00000632897 TTC22Q5TAA0 569 aa17.63■□□□□ 0.41
LIMS4-204ENST00000632897 COPS6Q7L5N1 327 aa17.63■□□□□ 0.41
LIMS4-204ENST00000632897 TBC1D32Q96NH3 1257 aa17.63■□□□□ 0.41
LIMS4-204ENST00000632897 METTL22Q9BUU2 404 aaPredicted RBP17.63■□□□□ 0.41
LIMS4-204ENST00000632897 LRRCC1Q9C099 1032 aa17.63■□□□□ 0.41
LIMS4-204ENST00000632897 C9orf78Q9NZ63 289 aaPredicted RBP17.63■□□□□ 0.41
LIMS4-204ENST00000632897 ANKRD13DQ6ZTN6 518 aa17.62■□□□□ 0.41
LIMS4-204ENST00000632897 PPP1R42Q7Z4L9 355 aa17.62■□□□□ 0.41
LIMS4-204ENST00000632897 GRM8O00222 908 aa17.61■□□□□ 0.41
LIMS4-204ENST00000632897 EXOC5O00471 708 aa17.61■□□□□ 0.41
LIMS4-204ENST00000632897 SMARCA5O60264 1052 aaPredicted RBP17.61■□□□□ 0.41
LIMS4-204ENST00000632897 EN1Q05925 392 aaPredicted RBP17.61■□□□□ 0.41
LIMS4-204ENST00000632897 HSP90AB4PQ58FF6 505 aa17.61■□□□□ 0.41
LIMS4-204ENST00000632897 VSIG10Q8N0Z9 540 aa17.61■□□□□ 0.41
LIMS4-204ENST00000632897 OSBPL3Q9H4L5 887 aa17.61■□□□□ 0.41
LIMS4-204ENST00000632897 EXOC6BQ9Y2D4 811 aa17.61■□□□□ 0.41
LIMS4-204ENST00000632897 FAM182BQ5T319 152 aa17.6■□□□□ 0.41
LIMS4-204ENST00000632897 ITGB4P16144 1822 aa17.59■□□□□ 0.41
LIMS4-204ENST00000632897 SRGAP3O43295 1099 aa17.59■□□□□ 0.41
LIMS4-204ENST00000632897 IGKV5-2P06315 115 aa17.59■□□□□ 0.41
LIMS4-204ENST00000632897 CWF19L2Q2TBE0 894 aaKnown RBP17.59■□□□□ 0.41
LIMS4-204ENST00000632897 C16orf71Q8IYS4 520 aaPredicted RBP17.59■□□□□ 0.41
LIMS4-204ENST00000632897 PLBD2Q8NHP8 589 aa17.59■□□□□ 0.41
LIMS4-204ENST00000632897 TEX13AQ9BXU3 409 aaPredicted RBP17.59■□□□□ 0.41
LIMS4-204ENST00000632897 ARFGEF2Q9Y6D5 1785 aa17.59■□□□□ 0.41
LIMS4-204ENST00000632897 NEURL1BA8MQ27 555 aa17.58■□□□□ 0.41
LIMS4-204ENST00000632897 APBB1O00213 710 aa17.58■□□□□ 0.41
LIMS4-204ENST00000632897 CDC45O75419 566 aa17.58■□□□□ 0.41
LIMS4-204ENST00000632897 TRIM37O94972 964 aa17.58■□□□□ 0.41
LIMS4-204ENST00000632897 GSPT1P15170 499 aaKnown RBP17.58■□□□□ 0.41
LIMS4-204ENST00000632897 COL15A1P39059 1388 aa17.58■□□□□ 0.4
LIMS4-204ENST00000632897 PIGBQ92521 554 aa17.57■□□□□ 0.4
LIMS4-204ENST00000632897 MYD88Q99836 296 aa17.57■□□□□ 0.4
LIMS4-204ENST00000632897 BCL9O00512 1426 aa17.57■□□□□ 0.4
LIMS4-204ENST00000632897 AOX1Q06278 1338 aa17.57■□□□□ 0.4
LIMS4-204ENST00000632897 SALL3Q9BXA9 1300 aa17.57■□□□□ 0.4
LIMS4-204ENST00000632897 NBPF26B4DH59 902 aa17.56■□□□□ 0.4
LIMS4-204ENST00000632897 PTCD1O75127 700 aaKnown RBP17.56■□□□□ 0.4
LIMS4-204ENST00000632897 APBA3O96018 575 aa17.56■□□□□ 0.4
LIMS4-204ENST00000632897 MFAP1P55081 439 aaKnown RBP17.56■□□□□ 0.4
LIMS4-204ENST00000632897 GCKRQ14397 625 aa17.56■□□□□ 0.4
LIMS4-204ENST00000632897 NBPF14Q5TI25 921 aa17.56■□□□□ 0.4
LIMS4-204ENST00000632897 NBPF10Q6P3W6 841 aaKnown RBP17.56■□□□□ 0.4
LIMS4-204ENST00000632897 NBPF15Q8N660 670 aa17.56■□□□□ 0.4
LIMS4-204ENST00000632897 OTUD7AQ8TE49 926 aaPredicted RBP17.56■□□□□ 0.4
LIMS4-204ENST00000632897 NUP188Q5SRE5 1749 aa17.56■□□□□ 0.4
LIMS4-204ENST00000632897 SURF6O75683 361 aaKnown RBP17.56■□□□□ 0.4
LIMS4-204ENST00000632897 PDE1AP54750 535 aa17.56■□□□□ 0.4
LIMS4-204ENST00000632897 TBC1D9Q6ZT07 1266 aa17.56■□□□□ 0.4
LIMS4-204ENST00000632897 KIF1BPQ96EK5 621 aa17.56■□□□□ 0.4
LIMS4-204ENST00000632897 C22orf23Q9BZE7 217 aa17.56■□□□□ 0.4
LIMS4-204ENST00000632897 RREB1Q92766 1687 aa17.55■□□□□ 0.4
LIMS4-204ENST00000632897 SUCLG2Q96I99 432 aa17.55■□□□□ 0.4
LIMS4-204ENST00000632897 ATG3Q9NT62 314 aa17.55■□□□□ 0.4
LIMS4-204ENST00000632897 DAXXQ9UER7 740 aaPredicted RBP17.55■□□□□ 0.4
LIMS4-204ENST00000632897 STAP2Q9UGK3 403 aa17.55■□□□□ 0.4
LIMS4-204ENST00000632897 AFDNP55196 1824 aaKnown RBP17.54■□□□□ 0.4
LIMS4-204ENST00000632897 PSDA5PKW4 1024 aaPredicted RBP17.54■□□□□ 0.4
LIMS4-204ENST00000632897 MX1P20591 662 aa17.54■□□□□ 0.4
LIMS4-204ENST00000632897 EZH2Q15910 746 aaKnown RBP17.54■□□□□ 0.4
LIMS4-204ENST00000632897 DDB1Q16531 1140 aa17.54■□□□□ 0.4
LIMS4-204ENST00000632897 ERC1Q8IUD2 1116 aa17.54■□□□□ 0.4
LIMS4-204ENST00000632897 RGPD3A6NKT7 1758 aaPredicted RBP17.53■□□□□ 0.4
LIMS4-204ENST00000632897 RGPD4Q7Z3J3 1758 aa17.53■□□□□ 0.4
LIMS4-204ENST00000632897 PIP4K2AP48426 406 aaPredicted RBP17.53■□□□□ 0.4
LIMS4-204ENST00000632897 CASC1Q6TDU7 716 aa17.53■□□□□ 0.4
LIMS4-204ENST00000632897 RHPN1Q8TCX5 695 aa17.53■□□□□ 0.4
LIMS4-204ENST00000632897 CAMKK2Q96RR4 588 aa17.53■□□□□ 0.4
LIMS4-204ENST00000632897 ASAP1Q9ULH1 1129 aa17.53■□□□□ 0.4
LIMS4-204ENST00000632897 DOT1LQ8TEK3 1739 aa17.53■□□□□ 0.4
LIMS4-204ENST00000632897 STARD3NLO95772 234 aa17.52■□□□□ 0.4
LIMS4-204ENST00000632897 A1BGP04217 495 aa17.52■□□□□ 0.4
LIMS4-204ENST00000632897 BECN1Q14457 450 aa17.52■□□□□ 0.4
LIMS4-204ENST00000632897 KAZALD1Q96I82 304 aa17.52■□□□□ 0.4
LIMS4-204ENST00000632897 SDSP20132 328 aa17.51■□□□□ 0.39
LIMS4-204ENST00000632897 RBM25P49756 843 aaKnown RBP17.51■□□□□ 0.39
LIMS4-204ENST00000632897 ANP32EQ9BTT0 268 aa17.51■□□□□ 0.39
LIMS4-204ENST00000632897 BICC1Q9H694 974 aaKnown RBP17.51■□□□□ 0.39
LIMS4-204ENST00000632897 TUBGCP6Q96RT7 1819 aa17.51■□□□□ 0.39
LIMS4-204ENST00000632897 R3HDM1Q15032 1099 aaKnown RBP17.5■□□□□ 0.39
LIMS4-204ENST00000632897 TTLL7Q6ZT98 887 aa17.5■□□□□ 0.39
LIMS4-204ENST00000632897 DNAJC10Q8IXB1 793 aa17.5■□□□□ 0.39
LIMS4-204ENST00000632897 SBF2Q86WG5 1849 aa17.5■□□□□ 0.39
LIMS4-204ENST00000632897 OS9Q13438 667 aaPredicted RBP17.49■□□□□ 0.39
LIMS4-204ENST00000632897 BCL11AQ9H165 835 aa17.49■□□□□ 0.39
LIMS4-204ENST00000632897 RABL6Q3YEC7 729 aaPredicted RBP17.48■□□□□ 0.39
LIMS4-204ENST00000632897 RBM42Q9BTD8 480 aaKnown RBP17.48■□□□□ 0.39
LIMS4-204ENST00000632897 IL1RAPL2Q9NP60 686 aa17.48■□□□□ 0.39
LIMS4-204ENST00000632897 CWC25Q9NXE8 425 aaPredicted RBP17.48■□□□□ 0.39
LIMS4-204ENST00000632897 USP42Q9H9J4 1324 aaKnown RBP17.48■□□□□ 0.39
LIMS4-204ENST00000632897 A0A087WZG4 1122 aa17.47■□□□□ 0.39
LIMS4-204ENST00000632897 ATP5J2-PTCD1G3V325 749 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms