RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-223	ENST00000631247	NPHP1	O15259	732 aa		13.82	□□□□□ -0.2
UBE3A-223	ENST00000631247	PPP2R1A	P30153	589 aa		13.82	□□□□□ -0.2
UBE3A-223	ENST00000631247	EIF5	P55010	431 aa	Known RBP	13.82	□□□□□ -0.2
UBE3A-223	ENST00000631247	LHX8	Q68G74	356 aa		13.82	□□□□□ -0.2
UBE3A-223	ENST00000631247	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.82	□□□□□ -0.2
UBE3A-223	ENST00000631247	CEMIP	Q8WUJ3	1361 aa		13.82	□□□□□ -0.2
UBE3A-223	ENST00000631247	GALR2	O43603	387 aa	Predicted RBP	13.81	□□□□□ -0.2
UBE3A-223	ENST00000631247	NEFM	P07197	916 aa		13.81	□□□□□ -0.2
UBE3A-223	ENST00000631247	C2CD5	Q86YS7	1000 aa		13.81	□□□□□ -0.2
UBE3A-223	ENST00000631247	PHACTR3	Q96KR7	559 aa		13.81	□□□□□ -0.2
UBE3A-223	ENST00000631247	BCL2L12	Q9HB09	334 aa		13.81	□□□□□ -0.2
UBE3A-223	ENST00000631247	KDM2B	Q8NHM5	1336 aa		13.81	□□□□□ -0.2
UBE3A-223	ENST00000631247	CARMIL3	Q8ND23	1372 aa		13.81	□□□□□ -0.2
UBE3A-223	ENST00000631247	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.8	□□□□□ -0.2
UBE3A-223	ENST00000631247		H0YIN7	160 aa		13.8	□□□□□ -0.2
UBE3A-223	ENST00000631247	IL6ST	P40189	918 aa	Predicted RBP	13.8	□□□□□ -0.2
UBE3A-223	ENST00000631247	BCOR	Q6W2J9	1755 aa		13.8	□□□□□ -0.2
UBE3A-223	ENST00000631247	TOMM70	O94826	608 aa		13.79	□□□□□ -0.2
UBE3A-223	ENST00000631247	TTLL6	Q8N841	843 aa		13.79	□□□□□ -0.2
UBE3A-223	ENST00000631247	NMRK2	Q9NPI5	230 aa		13.79	□□□□□ -0.2
UBE3A-223	ENST00000631247	TBC1D2B	Q9UPU7	963 aa		13.79	□□□□□ -0.2
UBE3A-223	ENST00000631247	TIAM2	Q8IVF5	1701 aa		13.78	□□□□□ -0.2
UBE3A-223	ENST00000631247	SBF1	O95248	1867 aa		13.78	□□□□□ -0.2
UBE3A-223	ENST00000631247	A1BG	P04217	495 aa		13.78	□□□□□ -0.2
UBE3A-223	ENST00000631247	TBC1D9B	Q66K14	1250 aa		13.78	□□□□□ -0.2
UBE3A-223	ENST00000631247	MCM10	Q7L590	875 aa		13.78	□□□□□ -0.2
UBE3A-223	ENST00000631247	COL11A2	P13942	1736 aa	Predicted RBP	13.78	□□□□□ -0.2
UBE3A-223	ENST00000631247	ANKRD31	Q8N7Z5	1873 aa		13.78	□□□□□ -0.2
UBE3A-223	ENST00000631247	PDE6B	P35913	854 aa		13.77	□□□□□ -0.21
UBE3A-223	ENST00000631247	RASSF7	Q02833	373 aa		13.77	□□□□□ -0.21
UBE3A-223	ENST00000631247	DZIP3	Q86Y13	1208 aa	Known RBP	13.77	□□□□□ -0.21
UBE3A-223	ENST00000631247	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
UBE3A-223	ENST00000631247	SETDB2	Q96T68	719 aa		13.77	□□□□□ -0.21
UBE3A-223	ENST00000631247	PDZRN3	Q9UPQ7	1066 aa		13.77	□□□□□ -0.21
UBE3A-223	ENST00000631247	CACNA1S	Q13698	1873 aa		13.76	□□□□□ -0.21
UBE3A-223	ENST00000631247	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.76	□□□□□ -0.21
UBE3A-223	ENST00000631247	KCNQ3	O43525	872 aa		13.76	□□□□□ -0.21
UBE3A-223	ENST00000631247	LMNB1	P20700	586 aa		13.76	□□□□□ -0.21
UBE3A-223	ENST00000631247	APLP1	P51693	650 aa		13.76	□□□□□ -0.21
UBE3A-223	ENST00000631247	ST5	P78524	1137 aa		13.76	□□□□□ -0.21
UBE3A-223	ENST00000631247	CNBD1	Q8NA66	436 aa		13.76	□□□□□ -0.21
UBE3A-223	ENST00000631247	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.76	□□□□□ -0.21
UBE3A-223	ENST00000631247	ZNF652	Q9Y2D9	606 aa		13.76	□□□□□ -0.21
UBE3A-223	ENST00000631247	LAMB4	A4D0S4	1761 aa		13.76	□□□□□ -0.21
UBE3A-223	ENST00000631247	SNRPA1	P09661	255 aa	Known RBP	13.75	□□□□□ -0.21
UBE3A-223	ENST00000631247	DCTN1	Q14203	1278 aa		13.75	□□□□□ -0.21
UBE3A-223	ENST00000631247	PRR5L	Q6MZQ0	368 aa		13.75	□□□□□ -0.21
UBE3A-223	ENST00000631247	PLCD3	Q8N3E9	789 aa		13.75	□□□□□ -0.21
UBE3A-223	ENST00000631247	BRIP1	Q9BX63	1249 aa		13.75	□□□□□ -0.21
UBE3A-223	ENST00000631247	DLG5	Q8TDM6	1919 aa		13.74	□□□□□ -0.21
UBE3A-223	ENST00000631247	HTATSF1	O43719	755 aa	Known RBP	13.74	□□□□□ -0.21
UBE3A-223	ENST00000631247	CAMTA2	O94983	1202 aa		13.74	□□□□□ -0.21
UBE3A-223	ENST00000631247	PIP4K2A	P48426	406 aa	Predicted RBP	13.74	□□□□□ -0.21
UBE3A-223	ENST00000631247	CCDC24	Q8N4L8	307 aa		13.74	□□□□□ -0.21
UBE3A-223	ENST00000631247	RBM46	Q8TBY0	533 aa	Known RBP	13.74	□□□□□ -0.21
UBE3A-223	ENST00000631247	FBXO3	Q9UK99	471 aa		13.74	□□□□□ -0.21
UBE3A-223	ENST00000631247	CCDC88A	Q3V6T2	1871 aa		13.74	□□□□□ -0.21
UBE3A-223	ENST00000631247	WDR90	Q96KV7	1748 aa		13.73	□□□□□ -0.21
UBE3A-223	ENST00000631247	PCNT	O95613	3336 aa		13.73	□□□□□ -0.21
UBE3A-223	ENST00000631247	MAPK8IP3	Q9UPT6	1336 aa		13.73	□□□□□ -0.21
UBE3A-223	ENST00000631247	USP16	Q9Y5T5	823 aa		13.73	□□□□□ -0.21
UBE3A-223	ENST00000631247	PRAMEF22	A3QJZ6	481 aa		13.72	□□□□□ -0.21
UBE3A-223	ENST00000631247	TAF7	Q15545	349 aa	Predicted RBP	13.72	□□□□□ -0.21
UBE3A-223	ENST00000631247	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.72	□□□□□ -0.21
UBE3A-223	ENST00000631247	RRAGC	Q9HB90	399 aa		13.72	□□□□□ -0.21
UBE3A-223	ENST00000631247	ARFGEF2	Q9Y6D5	1785 aa		13.72	□□□□□ -0.21
UBE3A-223	ENST00000631247	KDM3B	Q7LBC6	1761 aa		13.71	□□□□□ -0.21
UBE3A-223	ENST00000631247	NFKBIE	O00221	500 aa		13.71	□□□□□ -0.21
UBE3A-223	ENST00000631247	C21orf2	O43822	256 aa		13.71	□□□□□ -0.21
UBE3A-223	ENST00000631247	FSTL1	Q12841	308 aa		13.71	□□□□□ -0.21
UBE3A-223	ENST00000631247	PNN	Q9H307	717 aa	Known RBP	13.71	□□□□□ -0.21
UBE3A-223	ENST00000631247	FER1L6	Q2WGJ9	1857 aa		13.7	□□□□□ -0.22
UBE3A-223	ENST00000631247	CLEC4G	Q6UXB4	293 aa		13.7	□□□□□ -0.22
UBE3A-223	ENST00000631247	PNISR	Q8TF01	805 aa	Known RBP	13.7	□□□□□ -0.22
UBE3A-223	ENST00000631247	CNKSR1	Q969H4	720 aa		13.7	□□□□□ -0.22
UBE3A-223	ENST00000631247	GLTPD2	A6NH11	291 aa		13.69	□□□□□ -0.22
UBE3A-223	ENST00000631247	SOGA3	Q5TF21	947 aa		13.69	□□□□□ -0.22
UBE3A-223	ENST00000631247	STYK1	Q6J9G0	422 aa		13.69	□□□□□ -0.22
UBE3A-223	ENST00000631247	PRPF40B	Q6NWY9	871 aa	Known RBP	13.69	□□□□□ -0.22
UBE3A-223	ENST00000631247	MASTL	Q96GX5	879 aa		13.69	□□□□□ -0.22
UBE3A-223	ENST00000631247	TAOK3	Q9H2K8	898 aa		13.69	□□□□□ -0.22
UBE3A-223	ENST00000631247	MIS18A	Q9NYP9	233 aa		13.69	□□□□□ -0.22
UBE3A-223	ENST00000631247	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
UBE3A-223	ENST00000631247	DICER1	Q9UPY3	1922 aa	Known RBP	13.68	□□□□□ -0.22
UBE3A-223	ENST00000631247	FAM177B	A6PVY3	158 aa		13.68	□□□□□ -0.22
UBE3A-223	ENST00000631247	SRGN	P10124	158 aa		13.68	□□□□□ -0.22
UBE3A-223	ENST00000631247	VEGFA	P15692	232 aa	Predicted RBP	13.68	□□□□□ -0.22
UBE3A-223	ENST00000631247	GTF2E1	P29083	439 aa	Predicted RBP	13.68	□□□□□ -0.22
UBE3A-223	ENST00000631247	NFE2L2	Q16236	605 aa		13.68	□□□□□ -0.22
UBE3A-223	ENST00000631247	ERFE	Q4G0M1	354 aa		13.68	□□□□□ -0.22
UBE3A-223	ENST00000631247	SMC1B	Q8NDV3	1235 aa		13.68	□□□□□ -0.22
UBE3A-223	ENST00000631247	SLX4	Q8IY92	1834 aa		13.67	□□□□□ -0.22
UBE3A-223	ENST00000631247	NBPF26	B4DH59	902 aa		13.67	□□□□□ -0.22
UBE3A-223	ENST00000631247	PRELP	P51888	382 aa		13.67	□□□□□ -0.22
UBE3A-223	ENST00000631247	DPY19L2	Q6NUT2	758 aa		13.67	□□□□□ -0.22
UBE3A-223	ENST00000631247	NBPF10	Q6P3W6	841 aa	Known RBP	13.67	□□□□□ -0.22
UBE3A-223	ENST00000631247	TPTE2	Q6XPS3	522 aa		13.67	□□□□□ -0.22
UBE3A-223	ENST00000631247	KIF6	Q6ZMV9	814 aa		13.67	□□□□□ -0.22
UBE3A-223	ENST00000631247	NGEF	Q8N5V2	710 aa		13.67	□□□□□ -0.22
UBE3A-223	ENST00000631247	NBPF15	Q8N660	670 aa		13.67	□□□□□ -0.22

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