RNA–Protein interactions for RNA: ENST00000630659.2

BBS1-225, Transcript of Bardet-Biedl syndrome 1, human

TSL 5 BASIC

Gene BBS1, Length 1,934 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-225	ENST00000630659	HMMR	O75330	724 aa		18.64	■□□□□ 0.58
BBS1-225	ENST00000630659	PROSER3	Q2NL68	480 aa		18.64	■□□□□ 0.58
BBS1-225	ENST00000630659	PI4KAP1	Q8N8J0	262 aa		18.64	■□□□□ 0.58
BBS1-225	ENST00000630659	FMNL2	Q96PY5	1086 aa		18.64	■□□□□ 0.58
BBS1-225	ENST00000630659	CCDC94	Q9BW85	323 aa	Predicted RBP	18.64	■□□□□ 0.58
BBS1-225	ENST00000630659	DDX54	Q8TDD1	881 aa	Known RBP	18.64	■□□□□ 0.57
BBS1-225	ENST00000630659	SHANK3	Q9BYB0	1731 aa		18.64	■□□□□ 0.57
BBS1-225	ENST00000630659	C5	P01031	1676 aa		18.63	■□□□□ 0.57
BBS1-225	ENST00000630659	SNRPA1	P09661	255 aa	Known RBP	18.63	■□□□□ 0.57
BBS1-225	ENST00000630659	USP44	Q9H0E7	712 aa		18.63	■□□□□ 0.57
BBS1-225	ENST00000630659	ADCY9	O60503	1353 aa		18.63	■□□□□ 0.57
BBS1-225	ENST00000630659	BEND3	Q5T5X7	828 aa		18.62	■□□□□ 0.57
BBS1-225	ENST00000630659	ZKSCAN5	Q9Y2L8	839 aa		18.62	■□□□□ 0.57
BBS1-225	ENST00000630659	PDIA6	Q15084	440 aa		18.62	■□□□□ 0.57
BBS1-225	ENST00000630659	GTPBP4	Q9BZE4	634 aa	Known RBP	18.62	■□□□□ 0.57
BBS1-225	ENST00000630659	KIF20A	O95235	890 aa		18.61	■□□□□ 0.57
BBS1-225	ENST00000630659	KSR2	Q6VAB6	950 aa		18.61	■□□□□ 0.57
BBS1-225	ENST00000630659	UBTFL1	P0CB47	393 aa	Predicted RBP	18.61	■□□□□ 0.57
BBS1-225	ENST00000630659	CCDC39	Q9UFE4	941 aa		18.61	■□□□□ 0.57
BBS1-225	ENST00000630659	DDX58	O95786	925 aa	Known RBP	18.6	■□□□□ 0.57
BBS1-225	ENST00000630659	PIP4K2B	P78356	416 aa		18.6	■□□□□ 0.57
BBS1-225	ENST00000630659	ATP8B2	P98198	1209 aa		18.6	■□□□□ 0.57
BBS1-225	ENST00000630659	MAP3K2	Q9Y2U5	619 aa		18.6	■□□□□ 0.57
BBS1-225	ENST00000630659	DDX49	Q9Y6V7	483 aa	Known RBP	18.6	■□□□□ 0.57
BBS1-225	ENST00000630659	USP16	Q9Y5T5	823 aa		18.59	■□□□□ 0.57
BBS1-225	ENST00000630659	LRRFIP2	Q9Y608	721 aa	Known RBP	18.59	■□□□□ 0.57
BBS1-225	ENST00000630659	DISP2	A7MBM2	1401 aa		18.59	■□□□□ 0.57
BBS1-225	ENST00000630659		K7ELQ4	463 aa	Predicted RBP	18.59	■□□□□ 0.57
BBS1-225	ENST00000630659	ALDH1L1	O75891	902 aa		18.58	■□□□□ 0.56
BBS1-225	ENST00000630659		A0A0U1RQG5	324 aa	Predicted RBP	18.57	■□□□□ 0.56
BBS1-225	ENST00000630659	ADAMTS2	O95450	1211 aa		18.57	■□□□□ 0.56
BBS1-225	ENST00000630659	AIMP1	Q12904	312 aa	Known RBP	18.57	■□□□□ 0.56
BBS1-225	ENST00000630659	GLI3	P10071	1580 aa		18.56	■□□□□ 0.56
BBS1-225	ENST00000630659	MYL6B	P14649	208 aa		18.56	■□□□□ 0.56
BBS1-225	ENST00000630659	TAF3	Q5VWG9	929 aa		18.56	■□□□□ 0.56
BBS1-225	ENST00000630659	PLCH1	Q4KWH8	1693 aa		18.56	■□□□□ 0.56
BBS1-225	ENST00000630659	PAPPA	Q13219	1627 aa		18.56	■□□□□ 0.56
BBS1-225	ENST00000630659	LETM1	O95202	739 aa	Predicted RBP	18.55	■□□□□ 0.56
BBS1-225	ENST00000630659	NUCB2	P80303	420 aa		18.55	■□□□□ 0.56
BBS1-225	ENST00000630659	BMP2KL	Q5H9B9	411 aa		18.55	■□□□□ 0.56
BBS1-225	ENST00000630659	LAMB4	A4D0S4	1761 aa		18.55	■□□□□ 0.56
BBS1-225	ENST00000630659	UBR2	Q8IWV8	1755 aa		18.55	■□□□□ 0.56
BBS1-225	ENST00000630659	PNMA6E	A0A0J9YXQ4	647 aa		18.55	■□□□□ 0.56
BBS1-225	ENST00000630659	HMGN5	P82970	282 aa	Known RBP	18.55	■□□□□ 0.56
BBS1-225	ENST00000630659	XAGE3	Q8WTP9	111 aa		18.55	■□□□□ 0.56
BBS1-225	ENST00000630659	PRIMPOL	Q96LW4	560 aa		18.55	■□□□□ 0.56
BBS1-225	ENST00000630659	TOGARAM1	Q9Y4F4	1720 aa		18.54	■□□□□ 0.56
BBS1-225	ENST00000630659	UBAP1L	F5GYI3	381 aa		18.54	■□□□□ 0.56
BBS1-225	ENST00000630659	BAG4	O95429	457 aa	Known RBP	18.54	■□□□□ 0.56
BBS1-225	ENST00000630659	NBPF7	P0C2Y1	421 aa	Predicted RBP	18.54	■□□□□ 0.56
BBS1-225	ENST00000630659	COPS6	Q7L5N1	327 aa		18.54	■□□□□ 0.56
BBS1-225	ENST00000630659	RIC3	Q7Z5B4	369 aa		18.54	■□□□□ 0.56
BBS1-225	ENST00000630659	LINS1	Q8NG48	757 aa		18.54	■□□□□ 0.56
BBS1-225	ENST00000630659	TMOD3	Q9NYL9	352 aa		18.54	■□□□□ 0.56
BBS1-225	ENST00000630659	KCP	Q6ZWJ8	1503 aa		18.53	■□□□□ 0.56
BBS1-225	ENST00000630659	LRP10	Q7Z4F1	713 aa		18.53	■□□□□ 0.56
BBS1-225	ENST00000630659	PLEKHM2	Q8IWE5	1019 aa		18.53	■□□□□ 0.56
BBS1-225	ENST00000630659	TNS2	Q63HR2	1409 aa		18.53	■□□□□ 0.56
BBS1-225	ENST00000630659	NUTM2B	A6NNL0	878 aa	Predicted RBP	18.53	■□□□□ 0.56
BBS1-225	ENST00000630659	NUTM2E	B1AL46	878 aa	Predicted RBP	18.53	■□□□□ 0.56
BBS1-225	ENST00000630659	EXOC5	O00471	708 aa		18.53	■□□□□ 0.56
BBS1-225	ENST00000630659	NUTM2A	Q8IVF1	878 aa	Predicted RBP	18.53	■□□□□ 0.56
BBS1-225	ENST00000630659	NRAP	Q86VF7	1730 aa		18.52	■□□□□ 0.56
BBS1-225	ENST00000630659	APBB1	O00213	710 aa		18.52	■□□□□ 0.56
BBS1-225	ENST00000630659	SMARCA5	O60264	1052 aa	Predicted RBP	18.52	■□□□□ 0.56
BBS1-225	ENST00000630659	SSH3	Q8TE77	659 aa		18.52	■□□□□ 0.56
BBS1-225	ENST00000630659	C9orf78	Q9NZ63	289 aa	Predicted RBP	18.52	■□□□□ 0.56
BBS1-225	ENST00000630659	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	18.52	■□□□□ 0.56
BBS1-225	ENST00000630659	HDAC5	Q9UQL6	1122 aa		18.52	■□□□□ 0.56
BBS1-225	ENST00000630659	WNK3	Q9BYP7	1800 aa		18.51	■□□□□ 0.55
BBS1-225	ENST00000630659	ZSCAN20	P17040	1043 aa	Predicted RBP	18.51	■□□□□ 0.55
BBS1-225	ENST00000630659	ZSCAN23	Q3MJ62	389 aa		18.51	■□□□□ 0.55
BBS1-225	ENST00000630659	C16orf71	Q8IYS4	520 aa	Predicted RBP	18.51	■□□□□ 0.55
BBS1-225	ENST00000630659	MYRIP	Q8NFW9	859 aa		18.51	■□□□□ 0.55
BBS1-225	ENST00000630659	CDCA7	Q9BWT1	371 aa	Predicted RBP	18.51	■□□□□ 0.55
BBS1-225	ENST00000630659	NEXN	Q0ZGT2	675 aa		18.51	■□□□□ 0.55
BBS1-225	ENST00000630659	POLA2	Q14181	598 aa		18.51	■□□□□ 0.55
BBS1-225	ENST00000630659	CWF19L2	Q2TBE0	894 aa	Known RBP	18.51	■□□□□ 0.55
BBS1-225	ENST00000630659	ANKRD13D	Q6ZTN6	518 aa		18.51	■□□□□ 0.55
BBS1-225	ENST00000630659	PPP1R42	Q7Z4L9	355 aa		18.51	■□□□□ 0.55
BBS1-225	ENST00000630659	EXOC6B	Q9Y2D4	811 aa		18.51	■□□□□ 0.55
BBS1-225	ENST00000630659	THRAP3	Q9Y2W1	955 aa	Known RBP	18.51	■□□□□ 0.55
BBS1-225	ENST00000630659	SPATA31A1	Q5TZJ5	1347 aa		18.5	■□□□□ 0.55
BBS1-225	ENST00000630659	PTCD1	O75127	700 aa	Known RBP	18.5	■□□□□ 0.55
BBS1-225	ENST00000630659	METTL22	Q9BUU2	404 aa	Predicted RBP	18.5	■□□□□ 0.55
BBS1-225	ENST00000630659	GTF2F1	P35269	517 aa	Known RBP eCLIP	18.49	■□□□□ 0.55
BBS1-225	ENST00000630659	PIP4K2A	P48426	406 aa	Predicted RBP	18.49	■□□□□ 0.55
BBS1-225	ENST00000630659	IGKV5-2	P06315	115 aa		18.49	■□□□□ 0.55
BBS1-225	ENST00000630659	PIGB	Q92521	554 aa		18.49	■□□□□ 0.55
BBS1-225	ENST00000630659	LRRCC1	Q9C099	1032 aa		18.49	■□□□□ 0.55
BBS1-225	ENST00000630659	UTY	O14607	1347 aa		18.48	■□□□□ 0.55
BBS1-225	ENST00000630659	LRP6	O75581	1613 aa		18.48	■□□□□ 0.55
BBS1-225	ENST00000630659	GRM8	O00222	908 aa		18.48	■□□□□ 0.55
BBS1-225	ENST00000630659	KIAA2012	Q0VF49	1180 aa		18.48	■□□□□ 0.55
BBS1-225	ENST00000630659	OTUD7A	Q8TE49	926 aa	Predicted RBP	18.48	■□□□□ 0.55
BBS1-225	ENST00000630659	NBPF26	B4DH59	902 aa		18.47	■□□□□ 0.55
BBS1-225	ENST00000630659	SRGAP3	O43295	1099 aa		18.47	■□□□□ 0.55
BBS1-225	ENST00000630659	SSFA2	P28290	1259 aa		18.47	■□□□□ 0.55
BBS1-225	ENST00000630659	MTX1	Q13505	466 aa		18.47	■□□□□ 0.55
BBS1-225	ENST00000630659	TTC22	Q5TAA0	569 aa		18.47	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms