RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 FMNL2Q96PY5 1086 aa27.17■■□□□ 1.94
TARDBP-228ENST00000629725 CAMTA2O94983 1202 aa27.16■■□□□ 1.94
TARDBP-228ENST00000629725 CC2D1BQ5T0F9 858 aaKnown RBP27.16■■□□□ 1.94
TARDBP-228ENST00000629725 MASTLQ96GX5 879 aa27.16■■□□□ 1.94
TARDBP-228ENST00000629725 BCORQ6W2J9 1755 aa27.16■■□□□ 1.94
TARDBP-228ENST00000629725 SCN4AP35499 1836 aa27.16■■□□□ 1.94
TARDBP-228ENST00000629725 IQCA1LA6NCM1 817 aa27.15■■□□□ 1.94
TARDBP-228ENST00000629725 U2SURPO15042 1029 aaKnown RBP27.14■■□□□ 1.94
TARDBP-228ENST00000629725 KIF7Q2M1P5 1343 aa27.14■■□□□ 1.93
TARDBP-228ENST00000629725 PER1O15534 1290 aaPredicted RBP27.13■■□□□ 1.93
TARDBP-228ENST00000629725 CNTNAP1P78357 1384 aa27.12■■□□□ 1.93
TARDBP-228ENST00000629725 LDHDQ86WU2 507 aa27.12■■□□□ 1.93
TARDBP-228ENST00000629725 DZIP3Q86Y13 1208 aaKnown RBP27.12■■□□□ 1.93
TARDBP-228ENST00000629725 COL3A1P02461 1466 aaPredicted RBP27.11■■□□□ 1.93
TARDBP-228ENST00000629725 PASKQ96RG2 1323 aa27.11■■□□□ 1.93
TARDBP-228ENST00000629725 L3MBTL3Q96JM7 780 aaPredicted RBP27.1■■□□□ 1.93
TARDBP-228ENST00000629725 BTBD11A6QL63 1104 aa27.09■■□□□ 1.93
TARDBP-228ENST00000629725 FOXN1O15353 648 aa27.09■■□□□ 1.93
TARDBP-228ENST00000629725 TAF1DQ9H5J8 278 aaPredicted RBP27.09■■□□□ 1.93
TARDBP-228ENST00000629725 CEMIPQ8WUJ3 1361 aa27.09■■□□□ 1.93
TARDBP-228ENST00000629725 CCDC93Q567U6 631 aa27.08■■□□□ 1.93
TARDBP-228ENST00000629725 NBPF5PQ86XG9 351 aaPredicted RBP27.08■■□□□ 1.93
TARDBP-228ENST00000629725 C7orf43Q8WVR3 580 aa27.08■■□□□ 1.93
TARDBP-228ENST00000629725 KCNQ3O43525 872 aa27.07■■□□□ 1.92
TARDBP-228ENST00000629725 CLEC4GQ6UXB4 293 aa27.07■■□□□ 1.92
TARDBP-228ENST00000629725 USP16Q9Y5T5 823 aa27.07■■□□□ 1.92
TARDBP-228ENST00000629725 PIP4K2AP48426 406 aaPredicted RBP27.06■■□□□ 1.92
TARDBP-228ENST00000629725 ZNF652Q9Y2D9 606 aa27.06■■□□□ 1.92
TARDBP-228ENST00000629725 TMEM88BA6NKF7 163 aa27.05■■□□□ 1.92
TARDBP-228ENST00000629725 NPR1P16066 1061 aa27.05■■□□□ 1.92
TARDBP-228ENST00000629725 AIDAQ96BJ3 306 aa27.05■■□□□ 1.92
TARDBP-228ENST00000629725 PRDM10Q9NQV6 1147 aa27.05■■□□□ 1.92
TARDBP-228ENST00000629725 FKBP4Q02790 459 aaKnown RBP eCLIP27.04■■□□□ 1.92
TARDBP-228ENST00000629725 EAPPQ56P03 285 aaPredicted RBP27.04■■□□□ 1.92
TARDBP-228ENST00000629725 ITGBL1O95965 494 aaPredicted RBP27.03■■□□□ 1.92
TARDBP-228ENST00000629725 VEGFBP49765 207 aa27.03■■□□□ 1.92
TARDBP-228ENST00000629725 ZNF277Q9NRM2 450 aaPredicted RBP27.03■■□□□ 1.92
TARDBP-228ENST00000629725 ZNF541Q9H0D2 1346 aa27.02■■□□□ 1.92
TARDBP-228ENST00000629725 CTCFP49711 727 aaPredicted RBP27.02■■□□□ 1.92
TARDBP-228ENST00000629725 CNGB1Q14028 1251 aaPredicted RBP27.02■■□□□ 1.92
TARDBP-228ENST00000629725 TPTE2Q6XPS3 522 aa27.02■■□□□ 1.92
TARDBP-228ENST00000629725 HACL1Q9UJ83 578 aa27.02■■□□□ 1.92
TARDBP-228ENST00000629725 CLEC11AQ9Y240 323 aa27.02■■□□□ 1.92
TARDBP-228ENST00000629725 KLRG2A4D1S0 409 aaPredicted RBP27.01■■□□□ 1.91
TARDBP-228ENST00000629725 PHACTR3Q96KR7 559 aa27.01■■□□□ 1.91
TARDBP-228ENST00000629725 ADAMTSL1Q8N6G6 1762 aa27■■□□□ 1.91
TARDBP-228ENST00000629725 PRAMEF22A3QJZ6 481 aa27■■□□□ 1.91
TARDBP-228ENST00000629725 RTKN2Q8IZC4 609 aa27■■□□□ 1.91
TARDBP-228ENST00000629725 NPC1L1Q9UHC9 1359 aa26.99■■□□□ 1.91
TARDBP-228ENST00000629725 SNRPA1P09661 255 aaKnown RBP26.99■■□□□ 1.91
TARDBP-228ENST00000629725 PRKAR2BP31323 418 aa26.99■■□□□ 1.91
TARDBP-228ENST00000629725 EPHX2P34913 555 aa26.99■■□□□ 1.91
TARDBP-228ENST00000629725 OLFM4Q6UX06 510 aa26.99■■□□□ 1.91
TARDBP-228ENST00000629725 NIP7Q9Y221 180 aaKnown RBP eCLIP26.99■■□□□ 1.91
TARDBP-228ENST00000629725 PNMA8AQ86V59 439 aaPredicted RBP26.98■■□□□ 1.91
TARDBP-228ENST00000629725 CCER1Q8TC90 406 aaPredicted RBP26.97■■□□□ 1.91
TARDBP-228ENST00000629725 WBP1LQ9NX94 342 aa26.97■■□□□ 1.91
TARDBP-228ENST00000629725 RNF123Q5XPI4 1314 aa26.96■■□□□ 1.91
TARDBP-228ENST00000629725 RGL2O15211 777 aa26.96■■□□□ 1.91
TARDBP-228ENST00000629725 ALDH1B1P30837 517 aa26.96■■□□□ 1.91
TARDBP-228ENST00000629725 IARSP41252 1262 aaKnown RBP26.96■■□□□ 1.91
TARDBP-228ENST00000629725 RSPH6AQ9H0K4 717 aa26.96■■□□□ 1.91
TARDBP-228ENST00000629725 FAM177BA6PVY3 158 aa26.95■■□□□ 1.9
TARDBP-228ENST00000629725 FZD9O00144 591 aa26.95■■□□□ 1.9
TARDBP-228ENST00000629725 CNTROBQ8N137 903 aa26.95■■□□□ 1.9
TARDBP-228ENST00000629725 RTF1Q92541 710 aaKnown RBP26.95■■□□□ 1.9
TARDBP-228ENST00000629725 LBX1P52954 281 aa26.94■■□□□ 1.9
TARDBP-228ENST00000629725 DEFB115Q30KQ5 88 aa26.94■■□□□ 1.9
TARDBP-228ENST00000629725 MAP1SQ66K74 1059 aaPredicted RBP26.94■■□□□ 1.9
TARDBP-228ENST00000629725 SYNE4Q8N205 404 aa26.94■■□□□ 1.9
TARDBP-228ENST00000629725 RASSF10A6NK89 507 aa26.93■■□□□ 1.9
TARDBP-228ENST00000629725 NBPF26B4DH59 902 aa26.93■■□□□ 1.9
TARDBP-228ENST00000629725 GTF2E1P29083 439 aaPredicted RBP26.93■■□□□ 1.9
TARDBP-228ENST00000629725 NBPF10Q6P3W6 841 aaKnown RBP26.93■■□□□ 1.9
TARDBP-228ENST00000629725 MCM10Q7L590 875 aa26.93■■□□□ 1.9
TARDBP-228ENST00000629725 GPC2Q8N158 579 aa26.93■■□□□ 1.9
TARDBP-228ENST00000629725 NBPF15Q8N660 670 aa26.93■■□□□ 1.9
TARDBP-228ENST00000629725 CFAP53Q96M91 514 aa26.92■■□□□ 1.9
TARDBP-228ENST00000629725 JDP2Q8WYK2 163 aa26.91■■□□□ 1.9
TARDBP-228ENST00000629725 HLFQ16534 295 aa26.9■■□□□ 1.9
TARDBP-228ENST00000629725 PSMD1Q99460 953 aa26.89■■□□□ 1.9
TARDBP-228ENST00000629725 ABT1Q9ULW3 272 aaKnown RBP26.89■■□□□ 1.9
TARDBP-228ENST00000629725 NUDCQ9Y266 331 aa26.89■■□□□ 1.9
TARDBP-228ENST00000629725 WDR33Q9C0J8 1336 aaKnown RBP26.89■■□□□ 1.89
TARDBP-228ENST00000629725 MAP2K1Q02750 393 aaPredicted RBP26.88■■□□□ 1.89
TARDBP-228ENST00000629725 SNED1Q8TER0 1413 aa26.87■■□□□ 1.89
TARDBP-228ENST00000629725 HSPA8P11142 646 aaKnown RBP26.86■■□□□ 1.89
TARDBP-228ENST00000629725 EIF6P56537 245 aaKnown RBP26.86■■□□□ 1.89
TARDBP-228ENST00000629725 DCTN1Q14203 1278 aa26.86■■□□□ 1.89
TARDBP-228ENST00000629725 CRY2Q49AN0 593 aa26.86■■□□□ 1.89
TARDBP-228ENST00000629725 NYXQ9GZU5 481 aa26.86■■□□□ 1.89
TARDBP-228ENST00000629725 GJA3Q9Y6H8 435 aa26.86■■□□□ 1.89
TARDBP-228ENST00000629725 LAMB4A4D0S4 1761 aa26.86■■□□□ 1.89
TARDBP-228ENST00000629725 NUP98P52948 1817 aa26.86■■□□□ 1.89
TARDBP-228ENST00000629725 U2AF1L5P0DN76 240 aaPredicted RBP26.85■■□□□ 1.89
TARDBP-228ENST00000629725 U2AF1Q01081 240 aaKnown RBP eCLIP26.85■■□□□ 1.893e-7■■■□□ 15.3
TARDBP-228ENST00000629725 DDX21Q9NR30 783 aaKnown RBP eCLIP26.85■■□□□ 1.89
TARDBP-228ENST00000629725 LMOD1P29536 600 aaPredicted RBP26.84■■□□□ 1.89
TARDBP-228ENST00000629725 CC2D2BQ6DHV5 1058 aa26.84■■□□□ 1.89
TARDBP-228ENST00000629725 NUTM1Q86Y26 1132 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms