RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 CWC25Q9NXE8 425 aaPredicted RBP13.59□□□□□ -0.23
SHPRH-211ENST00000629427 ARHGEF11O15085 1522 aa13.58□□□□□ -0.23
SHPRH-211ENST00000629427 PDE4BQ07343 736 aa13.58□□□□□ -0.23
SHPRH-211ENST00000629427 TCERG1LQ5VWI1 586 aa13.58□□□□□ -0.23
SHPRH-211ENST00000629427 LDHAL6AQ6ZMR3 332 aa13.58□□□□□ -0.23
SHPRH-211ENST00000629427 TMX1Q9H3N1 280 aa13.58□□□□□ -0.23
SHPRH-211ENST00000629427 PHF8Q9UPP1 1060 aa13.58□□□□□ -0.23
SHPRH-211ENST00000629427 GOLIM4O00461 696 aa13.58□□□□□ -0.24
SHPRH-211ENST00000629427 KIF5BP33176 963 aa13.58□□□□□ -0.24
SHPRH-211ENST00000629427 NAIPQ13075 1403 aa13.58□□□□□ -0.24
SHPRH-211ENST00000629427 TTF1Q15361 905 aaPredicted RBP13.58□□□□□ -0.24
SHPRH-211ENST00000629427 DBF4Q9UBU7 674 aaPredicted RBP13.58□□□□□ -0.24
SHPRH-211ENST00000629427 PPP1R42Q7Z4L9 355 aa13.58□□□□□ -0.24
SHPRH-211ENST00000629427 TCP11L1Q9NUJ3 509 aa13.58□□□□□ -0.24
SHPRH-211ENST00000629427 TIAM1Q13009 1591 aa13.58□□□□□ -0.24
SHPRH-211ENST00000629427 MTIF2P46199 727 aaKnown RBP13.58□□□□□ -0.24
SHPRH-211ENST00000629427 CCDC12Q8WUD4 166 aaPredicted RBP13.58□□□□□ -0.24
SHPRH-211ENST00000629427 MPHOSPH6Q99547 160 aaKnown RBP13.58□□□□□ -0.24
SHPRH-211ENST00000629427 ATP5J2-PTCD1G3V325 749 aa13.58□□□□□ -0.24
SHPRH-211ENST00000629427 CPLX3Q8WVH0 158 aa13.58□□□□□ -0.24
SHPRH-211ENST00000629427 UBE4AQ14139 1066 aa13.57□□□□□ -0.24
SHPRH-211ENST00000629427 PTPN14Q15678 1187 aa13.57□□□□□ -0.24
SHPRH-211ENST00000629427 KIF4BQ2VIQ3 1234 aa13.57□□□□□ -0.24
SHPRH-211ENST00000629427 MAP9Q49MG5 647 aa13.57□□□□□ -0.24
SHPRH-211ENST00000629427 CCDC183Q5T5S1 534 aa13.57□□□□□ -0.24
SHPRH-211ENST00000629427 SH2B1Q9NRF2 756 aaPredicted RBP13.57□□□□□ -0.24
SHPRH-211ENST00000629427 CIZ1Q9ULV3 898 aaPredicted RBP13.57□□□□□ -0.24
SHPRH-211ENST00000629427 ZSCAN12O43309 604 aa13.57□□□□□ -0.24
SHPRH-211ENST00000629427 USO1O60763 962 aaKnown RBP13.57□□□□□ -0.24
SHPRH-211ENST00000629427 KIF20AO95235 890 aa13.57□□□□□ -0.24
SHPRH-211ENST00000629427 AMPD3Q01432 767 aa13.57□□□□□ -0.24
SHPRH-211ENST00000629427 MCM4P33991 863 aa13.57□□□□□ -0.24
SHPRH-211ENST00000629427 PTPN23Q9H3S7 1636 aa13.57□□□□□ -0.24
SHPRH-211ENST00000629427 BICD1Q96G01 975 aa13.57□□□□□ -0.24
SHPRH-211ENST00000629427 CD109Q6YHK3 1445 aa13.56□□□□□ -0.24
SHPRH-211ENST00000629427 PRC1O43663 620 aa13.56□□□□□ -0.24
SHPRH-211ENST00000629427 ALDH1L2Q3SY69 923 aa13.56□□□□□ -0.24
SHPRH-211ENST00000629427 VTI1AQ96AJ9 217 aa13.56□□□□□ -0.24
SHPRH-211ENST00000629427 ERICH4A6NGS2 130 aa13.56□□□□□ -0.24
SHPRH-211ENST00000629427 SSH1Q8WYL5 1049 aa13.56□□□□□ -0.24
SHPRH-211ENST00000629427 POLA1P09884 1462 aaPredicted RBP13.56□□□□□ -0.24
SHPRH-211ENST00000629427 TMCO3Q6UWJ1 677 aa13.56□□□□□ -0.24
SHPRH-211ENST00000629427 MFSD6Q6ZSS7 791 aa13.56□□□□□ -0.24
SHPRH-211ENST00000629427 CKAP2LQ8IYA6 745 aa13.56□□□□□ -0.24
SHPRH-211ENST00000629427 SCAND2PQ9GZW5 306 aaPredicted RBP13.56□□□□□ -0.24
SHPRH-211ENST00000629427 MMRN2Q9H8L6 949 aa13.56□□□□□ -0.24
SHPRH-211ENST00000629427 NF2P35240 595 aa13.56□□□□□ -0.24
SHPRH-211ENST00000629427 CCDC141Q6ZP82 1450 aa13.55□□□□□ -0.24
SHPRH-211ENST00000629427 LDHCP07864 332 aa13.55□□□□□ -0.24
SHPRH-211ENST00000629427 PRPF4BQ13523 1007 aaKnown RBP13.55□□□□□ -0.24
SHPRH-211ENST00000629427 TTC21AQ8NDW8 1320 aa13.55□□□□□ -0.24
SHPRH-211ENST00000629427 TMCO5BA8MYB1 307 aa13.55□□□□□ -0.24
SHPRH-211ENST00000629427 GCOM1H8Y6P7 765 aaPredicted RBP13.55□□□□□ -0.24
SHPRH-211ENST00000629427 MYZAPP0CAP1 466 aa13.55□□□□□ -0.24
SHPRH-211ENST00000629427 PAFAH1B1P43034 410 aa13.55□□□□□ -0.24
SHPRH-211ENST00000629427 HAND2P61296 217 aa13.55□□□□□ -0.24
SHPRH-211ENST00000629427 STXBP4Q6ZWJ1 553 aa13.55□□□□□ -0.24
SHPRH-211ENST00000629427 EVI5LQ96CN4 794 aa13.55□□□□□ -0.24
SHPRH-211ENST00000629427 NOP2P46087 812 aaKnown RBP13.55□□□□□ -0.24
SHPRH-211ENST00000629427 URI1O94763 535 aaPredicted RBP13.55□□□□□ -0.24
SHPRH-211ENST00000629427 CCDC40Q4G0X9 1142 aa13.55□□□□□ -0.24
SHPRH-211ENST00000629427 GRIPAP1Q4V328 841 aa13.55□□□□□ -0.24
SHPRH-211ENST00000629427 ISM2Q6H9L7 571 aa13.55□□□□□ -0.24
SHPRH-211ENST00000629427 TTC16Q8NEE8 873 aa13.55□□□□□ -0.24
SHPRH-211ENST00000629427 TEX13AQ9BXU3 409 aaPredicted RBP13.55□□□□□ -0.24
SHPRH-211ENST00000629427 GBP3Q9H0R5 595 aa13.55□□□□□ -0.24
SHPRH-211ENST00000629427 NKTRP30414 1462 aaKnown RBP13.55□□□□□ -0.24
SHPRH-211ENST00000629427 SNRKQ9NRH2 765 aa13.55□□□□□ -0.24
SHPRH-211ENST00000629427 IDEP14735 1019 aa13.54□□□□□ -0.24
SHPRH-211ENST00000629427 TOPBP1Q92547 1522 aa13.54□□□□□ -0.24
SHPRH-211ENST00000629427 FSIP1Q8NA03 581 aa13.54□□□□□ -0.24
SHPRH-211ENST00000629427 NBPF6Q5VWK0 638 aa13.54□□□□□ -0.24
SHPRH-211ENST00000629427 NBPF5PQ86XG9 351 aaPredicted RBP13.54□□□□□ -0.24
SHPRH-211ENST00000629427 JARID2Q92833 1246 aaPredicted RBP13.54□□□□□ -0.24
SHPRH-211ENST00000629427 NBPF4Q96M43 638 aa13.54□□□□□ -0.24
SHPRH-211ENST00000629427 TAOK3Q9H2K8 898 aa13.54□□□□□ -0.24
SHPRH-211ENST00000629427 PTPRCP08575 1304 aa13.54□□□□□ -0.24
SHPRH-211ENST00000629427 LMAN1P49257 510 aa13.54□□□□□ -0.24
SHPRH-211ENST00000629427 MICU3Q86XE3 530 aa13.54□□□□□ -0.24
SHPRH-211ENST00000629427 WDR70Q9NW82 654 aa13.54□□□□□ -0.24
SHPRH-211ENST00000629427 MCM3P25205 808 aa13.54□□□□□ -0.24
SHPRH-211ENST00000629427 CTAGE5O15320 804 aa13.54□□□□□ -0.24
SHPRH-211ENST00000629427 YEATS4O95619 227 aa13.54□□□□□ -0.24
SHPRH-211ENST00000629427 CLIP2Q9UDT6 1046 aa13.54□□□□□ -0.24
SHPRH-211ENST00000629427 LIMCH1Q9UPQ0 1083 aa13.54□□□□□ -0.24
SHPRH-211ENST00000629427 CEBPAP49715 358 aaPredicted RBP13.53□□□□□ -0.24
SHPRH-211ENST00000629427 CLEC11AQ9Y240 323 aa13.53□□□□□ -0.24
SHPRH-211ENST00000629427 EMILIN1Q9Y6C2 1016 aa13.53□□□□□ -0.24
SHPRH-211ENST00000629427 WASLO00401 505 aaPredicted RBP13.53□□□□□ -0.24
SHPRH-211ENST00000629427 MAP3K9P80192 1104 aa13.53□□□□□ -0.24
SHPRH-211ENST00000629427 UBE3BQ7Z3V4 1068 aa13.53□□□□□ -0.24
SHPRH-211ENST00000629427 PLCD3Q8N3E9 789 aa13.53□□□□□ -0.24
SHPRH-211ENST00000629427 SLC26A6Q9BXS9 759 aa13.53□□□□□ -0.24
SHPRH-211ENST00000629427 HOMER2Q9NSB8 354 aa13.53□□□□□ -0.24
SHPRH-211ENST00000629427 IQGAP2Q13576 1575 aa13.53□□□□□ -0.24
SHPRH-211ENST00000629427 METAP2P50579 478 aaKnown RBP eCLIP13.53□□□□□ -0.24
SHPRH-211ENST00000629427 IFNL2Q8IZJ0 200 aa13.53□□□□□ -0.24
SHPRH-211ENST00000629427 KIF18AQ8NI77 898 aa13.53□□□□□ -0.24
SHPRH-211ENST00000629427 F8W031 263 aaPredicted RBP13.53□□□□□ -0.24
SHPRH-211ENST00000629427 BIN1O00499 593 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms