RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 RBM42Q9BTD8 480 aaKnown RBP24.14■■□□□ 1.45
CHRNA4-209ENST00000627000 USP26Q9BXU7 913 aa24.14■■□□□ 1.45
CHRNA4-209ENST00000627000 ANTXR1Q9H6X2 564 aa24.14■■□□□ 1.45
CHRNA4-209ENST00000627000 HDAC5Q9UQL6 1122 aa24.14■■□□□ 1.45
CHRNA4-209ENST00000627000 AFDNP55196 1824 aaKnown RBP24.14■■□□□ 1.45
CHRNA4-209ENST00000627000 OS9Q13438 667 aaPredicted RBP24.13■■□□□ 1.45
CHRNA4-209ENST00000627000 JARID2Q92833 1246 aaPredicted RBP24.13■■□□□ 1.45
CHRNA4-209ENST00000627000 A1BGP04217 495 aa24.13■■□□□ 1.45
CHRNA4-209ENST00000627000 HSP90AB4PQ58FF6 505 aa24.13■■□□□ 1.45
CHRNA4-209ENST00000627000 UNC5CLQ8IV45 518 aa24.13■■□□□ 1.45
CHRNA4-209ENST00000627000 TNS2Q63HR2 1409 aa24.13■■□□□ 1.45
CHRNA4-209ENST00000627000 TRIM6-TRIM34B2RNG4 842 aa24.12■■□□□ 1.45
CHRNA4-209ENST00000627000 HSCBQ8IWL3 235 aa24.12■■□□□ 1.45
CHRNA4-209ENST00000627000 RILPL2Q969X0 211 aa24.12■■□□□ 1.45
CHRNA4-209ENST00000627000 ATP5J2-PTCD1G3V325 749 aa24.12■■□□□ 1.45
CHRNA4-209ENST00000627000 DISP2A7MBM2 1401 aa24.11■■□□□ 1.45
CHRNA4-209ENST00000627000 EPHA10Q5JZY3 1008 aa24.11■■□□□ 1.45
CHRNA4-209ENST00000627000 TMOD3Q9NYL9 352 aa24.11■■□□□ 1.45
CHRNA4-209ENST00000627000 AOX1Q06278 1338 aa24.11■■□□□ 1.45
CHRNA4-209ENST00000627000 PLBD2Q8NHP8 589 aa24.1■■□□□ 1.45
CHRNA4-209ENST00000627000 SNX21Q969T3 373 aa24.1■■□□□ 1.45
CHRNA4-209ENST00000627000 ERBB4Q15303 1308 aa24.1■■□□□ 1.45
CHRNA4-209ENST00000627000 EIF5BO60841 1220 aaKnown RBP24.1■■□□□ 1.45
CHRNA4-209ENST00000627000 TTLL7Q6ZT98 887 aa24.1■■□□□ 1.45
CHRNA4-209ENST00000627000 CD2BP2O95400 341 aaKnown RBP24.09■■□□□ 1.45
CHRNA4-209ENST00000627000 PI4K2BQ8TCG2 481 aa24.09■■□□□ 1.45
CHRNA4-209ENST00000627000 ERC2O15083 957 aa24.09■■□□□ 1.45
CHRNA4-209ENST00000627000 PIGBQ92521 554 aa24.09■■□□□ 1.45
CHRNA4-209ENST00000627000 ASAP1Q9ULH1 1129 aa24.08■■□□□ 1.45
CHRNA4-209ENST00000627000 ITGB4P16144 1822 aa24.08■■□□□ 1.44
CHRNA4-209ENST00000627000 MAP4K4O95819 1239 aaPredicted RBP24.08■■□□□ 1.44
CHRNA4-209ENST00000627000 PHLPP1O60346 1717 aa24.07■■□□□ 1.44
CHRNA4-209ENST00000627000 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.07■■□□□ 1.44
CHRNA4-209ENST00000627000 ADAMTS2O95450 1211 aa24.06■■□□□ 1.44
CHRNA4-209ENST00000627000 CHMLP26374 656 aa24.06■■□□□ 1.44
CHRNA4-209ENST00000627000 UBE3BQ7Z3V4 1068 aa24.06■■□□□ 1.44
CHRNA4-209ENST00000627000 KLHDC4Q8TBB5 520 aa24.06■■□□□ 1.44
CHRNA4-209ENST00000627000 FRAT2O75474 233 aaPredicted RBP24.06■■□□□ 1.44
CHRNA4-209ENST00000627000 REC8O95072 547 aa24.06■■□□□ 1.44
CHRNA4-209ENST00000627000 NUP188Q5SRE5 1749 aa24.06■■□□□ 1.44
CHRNA4-209ENST00000627000 SASH1O94885 1247 aa24.05■■□□□ 1.44
CHRNA4-209ENST00000627000 CLASRPQ8N2M8 674 aaKnown RBP24.05■■□□□ 1.44
CHRNA4-209ENST00000627000 ESYT1Q9BSJ8 1104 aa24.05■■□□□ 1.44
CHRNA4-209ENST00000627000 AK9Q5TCS8 1911 aa24.05■■□□□ 1.44
CHRNA4-209ENST00000627000 PLCH1Q4KWH8 1693 aa24.05■■□□□ 1.44
CHRNA4-209ENST00000627000 A0A087WZG4 1122 aa24.05■■□□□ 1.44
CHRNA4-209ENST00000627000 SIL1Q9H173 461 aa24.05■■□□□ 1.44
CHRNA4-209ENST00000627000 ERC1Q8IUD2 1116 aa24.04■■□□□ 1.44
CHRNA4-209ENST00000627000 KAT6BQ8WYB5 2073 aa24.04■■□□□ 1.44
CHRNA4-209ENST00000627000 ATG3Q9NT62 314 aa24.03■■□□□ 1.44
CHRNA4-209ENST00000627000 G3BP1Q13283 466 aaKnown RBP eCLIP24.03■■□□□ 1.44
CHRNA4-209ENST00000627000 ZBTB3Q9H5J0 574 aa24.03■■□□□ 1.44
CHRNA4-209ENST00000627000 USP42Q9H9J4 1324 aaKnown RBP24.02■■□□□ 1.44
CHRNA4-209ENST00000627000 WNK3Q9BYP7 1800 aa24.02■■□□□ 1.44
CHRNA4-209ENST00000627000 CASP7P55210 303 aa24.02■■□□□ 1.44
CHRNA4-209ENST00000627000 DNAJC10Q8IXB1 793 aa24.02■■□□□ 1.44
CHRNA4-209ENST00000627000 EXOC5O00471 708 aa24.01■■□□□ 1.43
CHRNA4-209ENST00000627000 PIP4K2BP78356 416 aa24.01■■□□□ 1.43
CHRNA4-209ENST00000627000 AACSQ86V21 672 aa24.01■■□□□ 1.43
CHRNA4-209ENST00000627000 IL25Q9H293 177 aa24.01■■□□□ 1.43
CHRNA4-209ENST00000627000 TTC41PQ6P2S7 1318 aa24■■□□□ 1.43
CHRNA4-209ENST00000627000 RABEP1Q15276 862 aa24■■□□□ 1.43
CHRNA4-209ENST00000627000 IFIT2P09913 472 aaKnown RBP23.99■■□□□ 1.43
CHRNA4-209ENST00000627000 RFX5P48382 616 aaPredicted RBP23.99■■□□□ 1.43
CHRNA4-209ENST00000627000 EAF2Q96CJ1 260 aaPredicted RBP23.99■■□□□ 1.43
CHRNA4-209ENST00000627000 NUTM2BA6NNL0 878 aaPredicted RBP23.99■■□□□ 1.43
CHRNA4-209ENST00000627000 NUTM2EB1AL46 878 aaPredicted RBP23.99■■□□□ 1.43
CHRNA4-209ENST00000627000 RABL6Q3YEC7 729 aaPredicted RBP23.99■■□□□ 1.43
CHRNA4-209ENST00000627000 NUTM2AQ8IVF1 878 aaPredicted RBP23.99■■□□□ 1.43
CHRNA4-209ENST00000627000 ZNF330Q9Y3S2 320 aaPredicted RBP23.99■■□□□ 1.43
CHRNA4-209ENST00000627000 TJP1Q07157 1748 aa23.99■■□□□ 1.43
CHRNA4-209ENST00000627000 NRAPQ86VF7 1730 aa23.98■■□□□ 1.43
CHRNA4-209ENST00000627000 BCL9O00512 1426 aa23.98■■□□□ 1.43
CHRNA4-209ENST00000627000 COL15A1P39059 1388 aa23.98■■□□□ 1.43
CHRNA4-209ENST00000627000 K7ELQ4 463 aaPredicted RBP23.98■■□□□ 1.43
CHRNA4-209ENST00000627000 GLRX3O76003 335 aaKnown RBP23.98■■□□□ 1.43
CHRNA4-209ENST00000627000 DEKP35659 375 aaKnown RBP23.98■■□□□ 1.43
CHRNA4-209ENST00000627000 CCDC8Q9H0W5 538 aaPredicted RBP23.98■■□□□ 1.43
CHRNA4-209ENST00000627000 ECHDC1Q9NTX5 307 aa23.98■■□□□ 1.43
CHRNA4-209ENST00000627000 H7C1W4 665 aa23.97■■□□□ 1.43
CHRNA4-209ENST00000627000 PTPN12Q05209 780 aaKnown RBP23.96■■□□□ 1.43
CHRNA4-209ENST00000627000 VSIG10Q8N0Z9 540 aa23.96■■□□□ 1.43
CHRNA4-209ENST00000627000 CNTROBQ8N137 903 aa23.96■■□□□ 1.43
CHRNA4-209ENST00000627000 SYTL4Q96C24 671 aaPredicted RBP23.96■■□□□ 1.43
CHRNA4-209ENST00000627000 ANO2Q9NQ90 1003 aa23.96■■□□□ 1.43
CHRNA4-209ENST00000627000 CWC25Q9NXE8 425 aaPredicted RBP23.96■■□□□ 1.43
CHRNA4-209ENST00000627000 TLR7Q9NYK1 1049 aaKnown RBP23.96■■□□□ 1.43
CHRNA4-209ENST00000627000 SLC4A9Q96Q91 983 aa23.96■■□□□ 1.43
CHRNA4-209ENST00000627000 COPRSQ9NQ92 184 aa23.96■■□□□ 1.43
CHRNA4-209ENST00000627000 LRP6O75581 1613 aa23.95■■□□□ 1.43
CHRNA4-209ENST00000627000 FOXD4L1Q9NU39 408 aa23.95■■□□□ 1.42
CHRNA4-209ENST00000627000 CHMP5Q9NZZ3 219 aa23.95■■□□□ 1.42
CHRNA4-209ENST00000627000 SPATA31A1Q5TZJ5 1347 aa23.95■■□□□ 1.42
CHRNA4-209ENST00000627000 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.95■■□□□ 1.42
CHRNA4-209ENST00000627000 FOXO4P98177 505 aa23.95■■□□□ 1.42
CHRNA4-209ENST00000627000 LMBR1LQ6UX01 489 aa23.95■■□□□ 1.42
CHRNA4-209ENST00000627000 DDIT3P35638 169 aa23.94■■□□□ 1.42
CHRNA4-209ENST00000627000 TEX13AQ9BXU3 409 aaPredicted RBP23.93■■□□□ 1.42
CHRNA4-209ENST00000627000 DOT1LQ8TEK3 1739 aa23.93■■□□□ 1.42
CHRNA4-209ENST00000627000 PRIM1P49642 420 aaKnown RBP23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms