RNA–Protein interactions for RNA: ENST00000626177.2

CCDC163-202, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 2,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-202ENST00000626177 POLA2Q14181 598 aa11.33□□□□□ -0.6
CCDC163-202ENST00000626177 IFNLR1Q8IU57 520 aaPredicted RBP11.33□□□□□ -0.6
CCDC163-202ENST00000626177 METTL22Q9BUU2 404 aaPredicted RBP11.33□□□□□ -0.6
CCDC163-202ENST00000626177 CCDC9Q9Y3X0 531 aaKnown RBP11.33□□□□□ -0.6
CCDC163-202ENST00000626177 PAPPAQ13219 1627 aa11.33□□□□□ -0.6
CCDC163-202ENST00000626177 UBR2Q8IWV8 1755 aa11.32□□□□□ -0.6
CCDC163-202ENST00000626177 NEURL1BA8MQ27 555 aa11.32□□□□□ -0.6
CCDC163-202ENST00000626177 SYTL4Q96C24 671 aaPredicted RBP11.32□□□□□ -0.6
CCDC163-202ENST00000626177 SLC4A9Q96Q91 983 aa11.32□□□□□ -0.6
CCDC163-202ENST00000626177 IL1RAPL2Q9NP60 686 aa11.32□□□□□ -0.6
CCDC163-202ENST00000626177 TNS2Q63HR2 1409 aa11.32□□□□□ -0.6
CCDC163-202ENST00000626177 IBTKQ9P2D0 1353 aaPredicted RBP11.32□□□□□ -0.6
CCDC163-202ENST00000626177 GRM8O00222 908 aa11.32□□□□□ -0.6
CCDC163-202ENST00000626177 SURF6O75683 361 aaKnown RBP11.32□□□□□ -0.6
CCDC163-202ENST00000626177 EPHA10Q5JZY3 1008 aa11.32□□□□□ -0.6
CCDC163-202ENST00000626177 TTC22Q5TAA0 569 aa11.32□□□□□ -0.6
CCDC163-202ENST00000626177 DNAJC10Q8IXB1 793 aa11.32□□□□□ -0.6
CCDC163-202ENST00000626177 CNKSR2Q8WXI2 1034 aa11.32□□□□□ -0.6
CCDC163-202ENST00000626177 RBM42Q9BTD8 480 aaKnown RBP11.32□□□□□ -0.6
CCDC163-202ENST00000626177 PA2G4Q9UQ80 394 aaKnown RBP11.32□□□□□ -0.6
CCDC163-202ENST00000626177 NRAPQ86VF7 1730 aa11.32□□□□□ -0.6
CCDC163-202ENST00000626177 PRIM1P49642 420 aaKnown RBP11.31□□□□□ -0.6
CCDC163-202ENST00000626177 TBC1D9Q6ZT07 1266 aa11.31□□□□□ -0.6
CCDC163-202ENST00000626177 GCKRQ14397 625 aa11.31□□□□□ -0.6
CCDC163-202ENST00000626177 ACSBG1Q96GR2 724 aa11.31□□□□□ -0.6
CCDC163-202ENST00000626177 TBC1D32Q96NH3 1257 aa11.31□□□□□ -0.6
CCDC163-202ENST00000626177 LRRCC1Q9C099 1032 aa11.31□□□□□ -0.6
CCDC163-202ENST00000626177 BICC1Q9H694 974 aaKnown RBP11.31□□□□□ -0.6
CCDC163-202ENST00000626177 ITGB4P16144 1822 aa11.31□□□□□ -0.6
CCDC163-202ENST00000626177 MARCH10Q8NA82 808 aaPredicted RBP11.3□□□□□ -0.6
CCDC163-202ENST00000626177 C8orf37Q96NL8 207 aa11.3□□□□□ -0.6
CCDC163-202ENST00000626177 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.3□□□□□ -0.6
CCDC163-202ENST00000626177 LAMB4A4D0S4 1761 aa11.3□□□□□ -0.6
CCDC163-202ENST00000626177 SPATA31A5Q5VU36 1347 aa11.3□□□□□ -0.6
CCDC163-202ENST00000626177 SPATA31A7Q8IWB4 1347 aa11.3□□□□□ -0.6
CCDC163-202ENST00000626177 SALL3Q9BXA9 1300 aa11.3□□□□□ -0.6
CCDC163-202ENST00000626177 A0A0G2JS52 829 aa11.29□□□□□ -0.6
CCDC163-202ENST00000626177 ATXN8OSP0DMR3 200 aa11.29□□□□□ -0.6
CCDC163-202ENST00000626177 SDSP20132 328 aa11.29□□□□□ -0.6
CCDC163-202ENST00000626177 PDE1AP54750 535 aa11.29□□□□□ -0.6
CCDC163-202ENST00000626177 NUTM1Q86Y26 1132 aa11.29□□□□□ -0.6
CCDC163-202ENST00000626177 ZBTB3Q9H5J0 574 aa11.29□□□□□ -0.6
CCDC163-202ENST00000626177 ZNF330Q9Y3S2 320 aaPredicted RBP11.29□□□□□ -0.6
CCDC163-202ENST00000626177 UTYO14607 1347 aa11.29□□□□□ -0.6
CCDC163-202ENST00000626177 SLIT2O94813 1529 aa11.29□□□□□ -0.6
CCDC163-202ENST00000626177 DDB1Q16531 1140 aa11.29□□□□□ -0.6
CCDC163-202ENST00000626177 RTL5Q5HYW3 569 aaPredicted RBP11.29□□□□□ -0.6
CCDC163-202ENST00000626177 PLBD2Q8NHP8 589 aa11.29□□□□□ -0.6
CCDC163-202ENST00000626177 KLHDC4Q8TBB5 520 aa11.29□□□□□ -0.6
CCDC163-202ENST00000626177 KAT6BQ8WYB5 2073 aa11.29□□□□□ -0.6
CCDC163-202ENST00000626177 BCL9O00512 1426 aa11.28□□□□□ -0.6
CCDC163-202ENST00000626177 NEXNQ0ZGT2 675 aa11.28□□□□□ -0.6
CCDC163-202ENST00000626177 RHPN1Q8TCX5 695 aa11.28□□□□□ -0.6
CCDC163-202ENST00000626177 C22orf23Q9BZE7 217 aa11.28□□□□□ -0.6
CCDC163-202ENST00000626177 WNK3Q9BYP7 1800 aa11.28□□□□□ -0.6
CCDC163-202ENST00000626177 MTX1Q13505 466 aa11.28□□□□□ -0.6
CCDC163-202ENST00000626177 FAM98CQ17RN3 349 aaKnown RBP11.28□□□□□ -0.6
CCDC163-202ENST00000626177 NGLY1Q96IV0 654 aa11.28□□□□□ -0.6
CCDC163-202ENST00000626177 ARFGEF2Q9Y6D5 1785 aa11.27□□□□□ -0.6
CCDC163-202ENST00000626177 UBE3BQ7Z3V4 1068 aa11.27□□□□□ -0.61
CCDC163-202ENST00000626177 UNC5CLQ8IV45 518 aa11.27□□□□□ -0.61
CCDC163-202ENST00000626177 DDRGK1Q96HY6 314 aa11.27□□□□□ -0.61
CCDC163-202ENST00000626177 THRAP3Q9Y2W1 955 aaKnown RBP11.27□□□□□ -0.61
CCDC163-202ENST00000626177 A0A087WZG4 1122 aa11.26□□□□□ -0.61
CCDC163-202ENST00000626177 KCNQ2O43526 872 aa11.26□□□□□ -0.61
CCDC163-202ENST00000626177 CDC45O75419 566 aa11.26□□□□□ -0.61
CCDC163-202ENST00000626177 MX1P20591 662 aa11.26□□□□□ -0.61
CCDC163-202ENST00000626177 CASP7P55210 303 aa11.26□□□□□ -0.61
CCDC163-202ENST00000626177 OSBPL3Q9H4L5 887 aa11.26□□□□□ -0.61
CCDC163-202ENST00000626177 UPF2Q9HAU5 1272 aaKnown RBP11.26□□□□□ -0.61
CCDC163-202ENST00000626177 ERBB4Q15303 1308 aa11.26□□□□□ -0.61
CCDC163-202ENST00000626177 BCL9LQ86UU0 1499 aa11.26□□□□□ -0.61
CCDC163-202ENST00000626177 RAB11FIP3O75154 756 aa11.25□□□□□ -0.61
CCDC163-202ENST00000626177 MAP4K4O95819 1239 aaPredicted RBP11.25□□□□□ -0.61
CCDC163-202ENST00000626177 CERKQ8TCT0 537 aa11.25□□□□□ -0.61
CCDC163-202ENST00000626177 ARID3AQ99856 593 aa11.25□□□□□ -0.61
CCDC163-202ENST00000626177 SIL1Q9H173 461 aa11.25□□□□□ -0.61
CCDC163-202ENST00000626177 AFDNP55196 1824 aaKnown RBP11.25□□□□□ -0.61
CCDC163-202ENST00000626177 DOT1LQ8TEK3 1739 aa11.25□□□□□ -0.61
CCDC163-202ENST00000626177 LRP6O75581 1613 aa11.25□□□□□ -0.61
CCDC163-202ENST00000626177 JCADQ9P266 1359 aa11.25□□□□□ -0.61
CCDC163-202ENST00000626177 CYP19A1P11511 503 aaPredicted RBP11.25□□□□□ -0.61
CCDC163-202ENST00000626177 VASPP50552 380 aaPredicted RBP11.25□□□□□ -0.61
CCDC163-202ENST00000626177 SASH1O94885 1247 aa11.24□□□□□ -0.61
CCDC163-202ENST00000626177 OS9Q13438 667 aaPredicted RBP11.24□□□□□ -0.61
CCDC163-202ENST00000626177 BARGINQ6ZT62 677 aa11.24□□□□□ -0.61
CCDC163-202ENST00000626177 PTF1AQ7RTS3 328 aa11.24□□□□□ -0.61
CCDC163-202ENST00000626177 KIF1BPQ96EK5 621 aa11.24□□□□□ -0.61
CCDC163-202ENST00000626177 ANP32EQ9BTT0 268 aa11.24□□□□□ -0.61
CCDC163-202ENST00000626177 CDCA7Q9BWT1 371 aaPredicted RBP11.24□□□□□ -0.61
CCDC163-202ENST00000626177 ZBTB1Q9Y2K1 713 aa11.24□□□□□ -0.61
CCDC163-202ENST00000626177 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.24□□□□□ -0.61
CCDC163-202ENST00000626177 HLFQ16534 295 aa11.24□□□□□ -0.61
CCDC163-202ENST00000626177 STAP2Q9UGK3 403 aa11.24□□□□□ -0.61
CCDC163-202ENST00000626177 NUP188Q5SRE5 1749 aa11.24□□□□□ -0.61
CCDC163-202ENST00000626177 H7C1W4 665 aa11.23□□□□□ -0.61
CCDC163-202ENST00000626177 STARD3NLO95772 234 aa11.23□□□□□ -0.61
CCDC163-202ENST00000626177 HSPA1LP34931 641 aa11.23□□□□□ -0.61
CCDC163-202ENST00000626177 RFX5P48382 616 aaPredicted RBP11.23□□□□□ -0.61
CCDC163-202ENST00000626177 FOXO4P98177 505 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms