RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 PRAMEF22A3QJZ6 481 aa19.29■□□□□ 0.68
TUBB3-215ENST00000625617 STYK1Q6J9G0 422 aa19.29■□□□□ 0.68
TUBB3-215ENST00000625617 CNKSR1Q969H4 720 aa19.29■□□□□ 0.68
TUBB3-215ENST00000625617 LTBP3Q9NS15 1303 aa19.28■□□□□ 0.68
TUBB3-215ENST00000625617 ERFEQ4G0M1 354 aa19.28■□□□□ 0.68
TUBB3-215ENST00000625617 DPY19L2Q6NUT2 758 aa19.28■□□□□ 0.68
TUBB3-215ENST00000625617 PRPF40BQ6NWY9 871 aaKnown RBP19.28■□□□□ 0.68
TUBB3-215ENST00000625617 NBPF5PQ86XG9 351 aaPredicted RBP19.28■□□□□ 0.68
TUBB3-215ENST00000625617 TAOK3Q9H2K8 898 aa19.28■□□□□ 0.68
TUBB3-215ENST00000625617 HTATSF1O43719 755 aaKnown RBP19.27■□□□□ 0.68
TUBB3-215ENST00000625617 SRGNP10124 158 aa19.27■□□□□ 0.68
TUBB3-215ENST00000625617 DCTN1Q14203 1278 aa19.27■□□□□ 0.68
TUBB3-215ENST00000625617 SOGA3Q5TF21 947 aa19.27■□□□□ 0.68
TUBB3-215ENST00000625617 CLEC4GQ6UXB4 293 aa19.27■□□□□ 0.68
TUBB3-215ENST00000625617 MASTLQ96GX5 879 aa19.26■□□□□ 0.67
TUBB3-215ENST00000625617 JMYQ8N9B5 988 aa19.25■□□□□ 0.67
TUBB3-215ENST00000625617 RGL2O15211 777 aa19.24■□□□□ 0.67
TUBB3-215ENST00000625617 NEFMP07197 916 aa19.24■□□□□ 0.67
TUBB3-215ENST00000625617 NBPF26B4DH59 902 aa19.23■□□□□ 0.67
TUBB3-215ENST00000625617 NBPF10Q6P3W6 841 aaKnown RBP19.23■□□□□ 0.67
TUBB3-215ENST00000625617 NBPF15Q8N660 670 aa19.23■□□□□ 0.67
TUBB3-215ENST00000625617 NIP7Q9Y221 180 aaKnown RBP eCLIP19.23■□□□□ 0.67
TUBB3-215ENST00000625617 TAF7Q15545 349 aaPredicted RBP19.22■□□□□ 0.67
TUBB3-215ENST00000625617 POTECB2RU33 542 aa19.21■□□□□ 0.67
TUBB3-215ENST00000625617 NPR1P16066 1061 aa19.21■□□□□ 0.67
TUBB3-215ENST00000625617 FER1L6Q2WGJ9 1857 aa19.21■□□□□ 0.67
TUBB3-215ENST00000625617 CCDC93Q567U6 631 aa19.21■□□□□ 0.67
TUBB3-215ENST00000625617 TPTE2Q6XPS3 522 aa19.2■□□□□ 0.66
TUBB3-215ENST00000625617 PNISRQ8TF01 805 aaKnown RBP19.19■□□□□ 0.66
TUBB3-215ENST00000625617 MIS18AQ9NYP9 233 aa19.19■□□□□ 0.66
TUBB3-215ENST00000625617 ARFGEF2Q9Y6D5 1785 aa19.19■□□□□ 0.66
TUBB3-215ENST00000625617 SLX4Q8IY92 1834 aa19.18■□□□□ 0.66
TUBB3-215ENST00000625617 KLRG2A4D1S0 409 aaPredicted RBP19.18■□□□□ 0.66
TUBB3-215ENST00000625617 FAM177BA6PVY3 158 aa19.18■□□□□ 0.66
TUBB3-215ENST00000625617 DDNO94850 711 aaPredicted RBP19.18■□□□□ 0.66
TUBB3-215ENST00000625617 LAMB4A4D0S4 1761 aa19.17■□□□□ 0.66
TUBB3-215ENST00000625617 HLFQ16534 295 aa19.17■□□□□ 0.66
TUBB3-215ENST00000625617 C7orf43Q8WVR3 580 aa19.17■□□□□ 0.66
TUBB3-215ENST00000625617 GTF2E1P29083 439 aaPredicted RBP19.16■□□□□ 0.66
TUBB3-215ENST00000625617 FKBP4Q02790 459 aaKnown RBP eCLIP19.16■□□□□ 0.662e-6■■■■□ 22.8
TUBB3-215ENST00000625617 CCDC88AQ3V6T2 1871 aa19.16■□□□□ 0.66
TUBB3-215ENST00000625617 IQCA1LA6NCM1 817 aa19.15■□□□□ 0.66
TUBB3-215ENST00000625617 NFE2L2Q16236 605 aa19.15■□□□□ 0.66
TUBB3-215ENST00000625617 CHADLQ6NUI6 762 aa19.15■□□□□ 0.66
TUBB3-215ENST00000625617 MAPK8IP3Q9UPT6 1336 aa19.15■□□□□ 0.66
TUBB3-215ENST00000625617 ABCC12Q96J65 1359 aa19.15■□□□□ 0.66
TUBB3-215ENST00000625617 DICER1Q9UPY3 1922 aaKnown RBP19.14■□□□□ 0.65
TUBB3-215ENST00000625617 KIF6Q6ZMV9 814 aa19.14■□□□□ 0.65
TUBB3-215ENST00000625617 NGEFQ8N5V2 710 aa19.14■□□□□ 0.65
TUBB3-215ENST00000625617 PLEKHF1Q96S99 279 aa19.14■□□□□ 0.65
TUBB3-215ENST00000625617 NYXQ9GZU5 481 aa19.14■□□□□ 0.65
TUBB3-215ENST00000625617 ZNF277Q9NRM2 450 aaPredicted RBP19.14■□□□□ 0.65
TUBB3-215ENST00000625617 CACNA1SQ13698 1873 aa19.14■□□□□ 0.65
TUBB3-215ENST00000625617 ERVV-1B6SEH8 477 aa19.13■□□□□ 0.65
TUBB3-215ENST00000625617 POTEIP0CG38 1075 aa19.13■□□□□ 0.65
TUBB3-215ENST00000625617 POTEJP0CG39 1038 aa19.13■□□□□ 0.65
TUBB3-215ENST00000625617 EIF4A1P60842 406 aaKnown RBP19.13■□□□□ 0.65
TUBB3-215ENST00000625617 COL13A1Q5TAT6 717 aaPredicted RBP19.13■□□□□ 0.65
TUBB3-215ENST00000625617 RTKN2Q8IZC4 609 aa19.13■□□□□ 0.65
TUBB3-215ENST00000625617 L3MBTL3Q96JM7 780 aaPredicted RBP19.13■□□□□ 0.65
TUBB3-215ENST00000625617 THUMPD2Q9BTF0 503 aaKnown RBP19.13■□□□□ 0.65
TUBB3-215ENST00000625617 MAP3K15Q6ZN16 1313 aa19.13■□□□□ 0.65
TUBB3-215ENST00000625617 KDM3BQ7LBC6 1761 aa19.13■□□□□ 0.65
TUBB3-215ENST00000625617 IBTKQ9P2D0 1353 aaPredicted RBP19.12■□□□□ 0.65
TUBB3-215ENST00000625617 ZNF541Q9H0D2 1346 aa19.12■□□□□ 0.65
TUBB3-215ENST00000625617 ALDH1B1P30837 517 aa19.12■□□□□ 0.65
TUBB3-215ENST00000625617 OLFM4Q6UX06 510 aa19.12■□□□□ 0.65
TUBB3-215ENST00000625617 RRP7AQ9Y3A4 280 aaKnown RBP19.12■□□□□ 0.65
TUBB3-215ENST00000625617 HSPA1AP0DMV8 641 aaKnown RBP19.11■□□□□ 0.65
TUBB3-215ENST00000625617 HSPA1BP0DMV9 641 aaKnown RBP19.11■□□□□ 0.65
TUBB3-215ENST00000625617 CRY2Q49AN0 593 aa19.11■□□□□ 0.65
TUBB3-215ENST00000625617 LDHDQ86WU2 507 aa19.11■□□□□ 0.65
TUBB3-215ENST00000625617 NUTM1Q86Y26 1132 aa19.11■□□□□ 0.65
TUBB3-215ENST00000625617 PNNQ9H307 717 aaKnown RBP19.11■□□□□ 0.65
TUBB3-215ENST00000625617 CREBZFQ9NS37 354 aa19.11■□□□□ 0.65
TUBB3-215ENST00000625617 MYL6BP14649 208 aa19.1■□□□□ 0.65
TUBB3-215ENST00000625617 TTLL7Q6ZT98 887 aa19.1■□□□□ 0.65
TUBB3-215ENST00000625617 TAF1DQ9H5J8 278 aaPredicted RBP19.1■□□□□ 0.65
TUBB3-215ENST00000625617 RIC1Q4ADV7 1423 aa19.09■□□□□ 0.65
TUBB3-215ENST00000625617 ERBB4Q15303 1308 aa19.09■□□□□ 0.65
TUBB3-215ENST00000625617 GPTP24298 496 aa19.09■□□□□ 0.65
TUBB3-215ENST00000625617 IARSP41252 1262 aaKnown RBP19.09■□□□□ 0.65
TUBB3-215ENST00000625617 RPGRQ92834 1020 aaKnown RBP19.09■□□□□ 0.65
TUBB3-215ENST00000625617 ZBTB3Q9H5J0 574 aa19.09■□□□□ 0.65
TUBB3-215ENST00000625617 UBN2Q6ZU65 1347 aa19.08■□□□□ 0.65
TUBB3-215ENST00000625617 HACL1Q9UJ83 578 aa19.08■□□□□ 0.64
TUBB3-215ENST00000625617 SNED1Q8TER0 1413 aa19.08■□□□□ 0.64
TUBB3-215ENST00000625617 EAPPQ56P03 285 aaPredicted RBP19.07■□□□□ 0.64
TUBB3-215ENST00000625617 TNS4Q8IZW8 715 aa19.07■□□□□ 0.64
TUBB3-215ENST00000625617 SYNE4Q8N205 404 aa19.07■□□□□ 0.64
TUBB3-215ENST00000625617 PSMD1Q99460 953 aa19.07■□□□□ 0.64
TUBB3-215ENST00000625617 MKRN1Q9UHC7 482 aaKnown RBP19.07■□□□□ 0.64
TUBB3-215ENST00000625617 TSPYL4Q9UJ04 414 aa19.07■□□□□ 0.64
TUBB3-215ENST00000625617 CC2D2BQ6DHV5 1058 aa19.06■□□□□ 0.64
TUBB3-215ENST00000625617 DLG5Q8TDM6 1919 aa19.06■□□□□ 0.64
TUBB3-215ENST00000625617 RNF123Q5XPI4 1314 aa19.05■□□□□ 0.64
TUBB3-215ENST00000625617 PASKQ96RG2 1323 aa19.05■□□□□ 0.64
TUBB3-215ENST00000625617 FZD9O00144 591 aa19.05■□□□□ 0.64
TUBB3-215ENST00000625617 EPHX2P34913 555 aa19.05■□□□□ 0.64
TUBB3-215ENST00000625617 SUSD4Q5VX71 490 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms