RNA–Protein interactions for RNA: ENST00000625364.1

PPA1-206, Transcript of pyrophosphatase (inorganic) 1, human

TSL 5 BASIC

Gene PPA1, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPA1-206	ENST00000625364	TIMELESS	Q9UNS1	1208 aa		19.55	■□□□□ 0.72
PPA1-206	ENST00000625364	KNSTRN	Q9Y448	316 aa		19.55	■□□□□ 0.72
PPA1-206	ENST00000625364	ADAMTSL1	Q8N6G6	1762 aa		19.55	■□□□□ 0.72
PPA1-206	ENST00000625364	ITGBL1	O95965	494 aa	Predicted RBP	19.54	■□□□□ 0.72
PPA1-206	ENST00000625364	CCDC93	Q567U6	631 aa		19.54	■□□□□ 0.72
PPA1-206	ENST00000625364	NPM2	Q86SE8	214 aa	Known RBP	19.54	■□□□□ 0.72
PPA1-206	ENST00000625364	ZNF496	Q96IT1	587 aa	Predicted RBP	19.54	■□□□□ 0.72
PPA1-206	ENST00000625364	TEX13A	Q9BXU3	409 aa	Predicted RBP	19.54	■□□□□ 0.72
PPA1-206	ENST00000625364	ZNF541	Q9H0D2	1346 aa		19.53	■□□□□ 0.72
PPA1-206	ENST00000625364	CAMTA2	O94983	1202 aa		19.53	■□□□□ 0.72
PPA1-206	ENST00000625364	HSPA8	P11142	646 aa	Known RBP	19.53	■□□□□ 0.72
PPA1-206	ENST00000625364	ABHD8	Q96I13	439 aa		19.53	■□□□□ 0.72
PPA1-206	ENST00000625364	HACL1	Q9UJ83	578 aa		19.53	■□□□□ 0.72
PPA1-206	ENST00000625364	CLEC11A	Q9Y240	323 aa		19.53	■□□□□ 0.72
PPA1-206	ENST00000625364	SIPA1L3	O60292	1781 aa	Predicted RBP	19.52	■□□□□ 0.72
PPA1-206	ENST00000625364	EIF4G2	P78344	907 aa	Known RBP eCLIP	19.52	■□□□□ 0.72
PPA1-206	ENST00000625364	FAM161A	Q3B820	660 aa		19.52	■□□□□ 0.72
PPA1-206	ENST00000625364	ZNF790	Q6PG37	636 aa		19.52	■□□□□ 0.72
PPA1-206	ENST00000625364	RASSF10	A6NK89	507 aa		19.51	■□□□□ 0.71
PPA1-206	ENST00000625364	HSPA5	P11021	654 aa	Known RBP	19.51	■□□□□ 0.71
PPA1-206	ENST00000625364	TEF	Q10587	303 aa		19.51	■□□□□ 0.71
PPA1-206	ENST00000625364	EPHX2	P34913	555 aa		19.5	■□□□□ 0.71
PPA1-206	ENST00000625364	FKBP4	Q02790	459 aa	Known RBP eCLIP	19.5	■□□□□ 0.71
PPA1-206	ENST00000625364	DEFB115	Q30KQ5	88 aa		19.5	■□□□□ 0.71
PPA1-206	ENST00000625364	C7orf43	Q8WVR3	580 aa		19.5	■□□□□ 0.71
PPA1-206	ENST00000625364	ZNF277	Q9NRM2	450 aa	Predicted RBP	19.5	■□□□□ 0.71
PPA1-206	ENST00000625364	A1BG	P04217	495 aa		19.49	■□□□□ 0.71
PPA1-206	ENST00000625364	MAP2K1	Q02750	393 aa	Predicted RBP	19.49	■□□□□ 0.71
PPA1-206	ENST00000625364	DZIP3	Q86Y13	1208 aa	Known RBP	19.49	■□□□□ 0.71
PPA1-206	ENST00000625364	FMNL2	Q96PY5	1086 aa		19.49	■□□□□ 0.71
PPA1-206	ENST00000625364	DIAPH1	O60610	1272 aa	Known RBP	19.48	■□□□□ 0.71
PPA1-206	ENST00000625364	NPR1	P16066	1061 aa		19.48	■□□□□ 0.71
PPA1-206	ENST00000625364	AMER1	Q5JTC6	1135 aa	Predicted RBP	19.48	■□□□□ 0.71
PPA1-206	ENST00000625364	MAP1S	Q66K74	1059 aa	Predicted RBP	19.48	■□□□□ 0.71
PPA1-206	ENST00000625364	PNMA8A	Q86V59	439 aa	Predicted RBP	19.48	■□□□□ 0.71
PPA1-206	ENST00000625364	NBPF5P	Q86XG9	351 aa	Predicted RBP	19.48	■□□□□ 0.71
PPA1-206	ENST00000625364	CNTROB	Q8N137	903 aa		19.48	■□□□□ 0.71
PPA1-206	ENST00000625364	RNF123	Q5XPI4	1314 aa		19.48	■□□□□ 0.71
PPA1-206	ENST00000625364	WDR33	Q9C0J8	1336 aa	Known RBP	19.48	■□□□□ 0.71
PPA1-206	ENST00000625364	ABT1	Q9ULW3	272 aa	Known RBP	19.47	■□□□□ 0.71
PPA1-206	ENST00000625364	GNAT3	A8MTJ3	354 aa		19.46	■□□□□ 0.71
PPA1-206	ENST00000625364	IL17RE	Q8NFR9	667 aa		19.46	■□□□□ 0.71
PPA1-206	ENST00000625364	THSD7B	Q9C0I4	1608 aa		19.46	■□□□□ 0.71
PPA1-206	ENST00000625364	OLFM4	Q6UX06	510 aa		19.45	■□□□□ 0.7
PPA1-206	ENST00000625364	RTKN2	Q8IZC4	609 aa		19.45	■□□□□ 0.7
PPA1-206	ENST00000625364	GAS2L2	Q8NHY3	880 aa		19.45	■□□□□ 0.7
PPA1-206	ENST00000625364	IARS	P41252	1262 aa	Known RBP	19.44	■□□□□ 0.7
PPA1-206	ENST00000625364	ZNF652	Q9Y2D9	606 aa		19.44	■□□□□ 0.7
PPA1-206	ENST00000625364	FZD9	O00144	591 aa		19.43	■□□□□ 0.7
PPA1-206	ENST00000625364	CLEC4G	Q6UXB4	293 aa		19.43	■□□□□ 0.7
PPA1-206	ENST00000625364	GPC2	Q8N158	579 aa		19.43	■□□□□ 0.7
PPA1-206	ENST00000625364	KLRG2	A4D1S0	409 aa	Predicted RBP	19.42	■□□□□ 0.7
PPA1-206	ENST00000625364	PIP4K2A	P48426	406 aa	Predicted RBP	19.42	■□□□□ 0.7
PPA1-206	ENST00000625364	DDX21	Q9NR30	783 aa	Known RBP eCLIP	19.42	■□□□□ 0.7
PPA1-206	ENST00000625364	CCDC85C	A6NKD9	419 aa		19.41	■□□□□ 0.7
PPA1-206	ENST00000625364	KCNQ3	O43525	872 aa		19.41	■□□□□ 0.7
PPA1-206	ENST00000625364	MLLT1	Q03111	559 aa	Predicted RBP	19.41	■□□□□ 0.7
PPA1-206	ENST00000625364	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	19.41	■□□□□ 0.7
PPA1-206	ENST00000625364	SYNE4	Q8N205	404 aa		19.41	■□□□□ 0.7
PPA1-206	ENST00000625364	BEGAIN	Q9BUH8	593 aa		19.41	■□□□□ 0.7
PPA1-206	ENST00000625364	TRPM7	Q96QT4	1865 aa		19.41	■□□□□ 0.7
PPA1-206	ENST00000625364	TPTE2	Q6XPS3	522 aa		19.4	■□□□□ 0.7
PPA1-206	ENST00000625364	CAPNS2	Q96L46	248 aa		19.4	■□□□□ 0.7
PPA1-206	ENST00000625364	CEMIP	Q8WUJ3	1361 aa		19.4	■□□□□ 0.7
PPA1-206	ENST00000625364	COL3A1	P02461	1466 aa	Predicted RBP	19.4	■□□□□ 0.7
PPA1-206	ENST00000625364	LTBP1	Q14766	1721 aa		19.39	■□□□□ 0.7
PPA1-206	ENST00000625364	PDE4DIP	Q5VU43	2346 aa		19.39	■□□□□ 0.69
PPA1-206	ENST00000625364	BTBD11	A6QL63	1104 aa		19.39	■□□□□ 0.69
PPA1-206	ENST00000625364	U2SURP	O15042	1029 aa	Known RBP	19.39	■□□□□ 0.69
PPA1-206	ENST00000625364	LMOD1	P29536	600 aa	Predicted RBP	19.39	■□□□□ 0.69
PPA1-206	ENST00000625364	ECE1	P42892	770 aa		19.39	■□□□□ 0.69
PPA1-206	ENST00000625364	JDP2	Q8WYK2	163 aa		19.39	■□□□□ 0.69
PPA1-206	ENST00000625364	NIP7	Q9Y221	180 aa	Known RBP eCLIP	19.39	■□□□□ 0.69
PPA1-206	ENST00000625364	USP16	Q9Y5T5	823 aa		19.39	■□□□□ 0.69
PPA1-206	ENST00000625364	FAM177B	A6PVY3	158 aa		19.38	■□□□□ 0.69
PPA1-206	ENST00000625364	ALDH1B1	P30837	517 aa		19.38	■□□□□ 0.69
PPA1-206	ENST00000625364	EIF6	P56537	245 aa	Known RBP	19.38	■□□□□ 0.69
PPA1-206	ENST00000625364	GRM1	Q13255	1194 aa		19.38	■□□□□ 0.69
PPA1-206	ENST00000625364	PSMD1	Q99460	953 aa		19.38	■□□□□ 0.69
PPA1-206	ENST00000625364	GJA3	Q9Y6H8	435 aa		19.38	■□□□□ 0.69
PPA1-206	ENST00000625364	SNED1	Q8TER0	1413 aa		19.37	■□□□□ 0.69
PPA1-206	ENST00000625364	CLSPN	Q9HAW4	1339 aa		19.37	■□□□□ 0.69
PPA1-206	ENST00000625364	CYP4F22	Q6NT55	531 aa		19.37	■□□□□ 0.69
PPA1-206	ENST00000625364	COL4A5	P29400	1685 aa		19.36	■□□□□ 0.69
PPA1-206	ENST00000625364	PRAMEF22	A3QJZ6	481 aa		19.36	■□□□□ 0.69
PPA1-206	ENST00000625364	RGL2	O15211	777 aa		19.36	■□□□□ 0.69
PPA1-206	ENST00000625364	RGS19	P49795	217 aa		19.36	■□□□□ 0.69
PPA1-206	ENST00000625364	FMR1	Q06787	632 aa	Known RBP eCLIP	19.36	■□□□□ 0.69
PPA1-206	ENST00000625364	CC2D1B	Q5T0F9	858 aa	Known RBP	19.36	■□□□□ 0.69
PPA1-206	ENST00000625364	GPR101	Q96P66	508 aa	Predicted RBP	19.36	■□□□□ 0.69
PPA1-206	ENST00000625364	SNRPA1	P09661	255 aa	Known RBP	19.34	■□□□□ 0.69
PPA1-206	ENST00000625364	GTF2E1	P29083	439 aa	Predicted RBP	19.34	■□□□□ 0.69
PPA1-206	ENST00000625364	TSKS	Q9UJT2	592 aa		19.34	■□□□□ 0.69
PPA1-206	ENST00000625364	EPS15	P42566	896 aa		19.33	■□□□□ 0.68
PPA1-206	ENST00000625364	SCNN1D	P51172	638 aa		19.33	■□□□□ 0.68
PPA1-206	ENST00000625364	TRIM26	Q12899	539 aa	Predicted RBP	19.33	■□□□□ 0.68
PPA1-206	ENST00000625364	PCDH10	Q9P2E7	1040 aa		19.33	■□□□□ 0.68
PPA1-206	ENST00000625364	TLL2	Q9Y6L7	1015 aa		19.33	■□□□□ 0.68
PPA1-206	ENST00000625364	ABCC12	Q96J65	1359 aa		19.32	■□□□□ 0.68
PPA1-206	ENST00000625364	CASP8AP2	Q9UKL3	1982 aa		19.32	■□□□□ 0.68

Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms