RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 FIGNL1Q6PIW4 674 aa7.72□□□□□ -1.17
CDKL5-207ENST00000624700 SLCO4C1Q6ZQN7 724 aa7.72□□□□□ -1.17
CDKL5-207ENST00000624700 CLP1Q92989 425 aaKnown RBP7.72□□□□□ -1.17
CDKL5-207ENST00000624700 HINFPQ9BQA5 517 aa7.72□□□□□ -1.17
CDKL5-207ENST00000624700 ZMIZ1Q9ULJ6 1067 aa7.72□□□□□ -1.17
CDKL5-207ENST00000624700 KIAA1024Q9UPX6 916 aa7.72□□□□□ -1.17
CDKL5-207ENST00000624700 KRBA1A5PL33 1030 aa7.71□□□□□ -1.18
CDKL5-207ENST00000624700 TMEM88BA6NKF7 163 aa7.71□□□□□ -1.18
CDKL5-207ENST00000624700 BRD1O95696 1058 aa7.71□□□□□ -1.18
CDKL5-207ENST00000624700 AMPD1P23109 780 aa7.71□□□□□ -1.18
CDKL5-207ENST00000624700 PLA2G4AP47712 749 aa7.71□□□□□ -1.18
CDKL5-207ENST00000624700 SCNN1DP51172 638 aa7.71□□□□□ -1.18
CDKL5-207ENST00000624700 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.71□□□□□ -1.18
CDKL5-207ENST00000624700 C1orf216Q8TAB5 229 aa7.71□□□□□ -1.18
CDKL5-207ENST00000624700 ZNF358Q9NW07 568 aa7.71□□□□□ -1.18
CDKL5-207ENST00000624700 GGA1Q9UJY5 639 aa7.71□□□□□ -1.18
CDKL5-207ENST00000624700 SFI1A8K8P3 1242 aa7.7□□□□□ -1.18
CDKL5-207ENST00000624700 TMEM229AB2RXF0 380 aa7.7□□□□□ -1.18
CDKL5-207ENST00000624700 COL8A1P27658 744 aa7.7□□□□□ -1.18
CDKL5-207ENST00000624700 SMTNP53814 917 aa7.7□□□□□ -1.18
CDKL5-207ENST00000624700 LINC00114Q6XXX2 140 aa7.7□□□□□ -1.18
CDKL5-207ENST00000624700 STK32AQ8WU08 396 aa7.7□□□□□ -1.18
CDKL5-207ENST00000624700 NIFKQ9BYG3 293 aaKnown RBP7.7□□□□□ -1.18
CDKL5-207ENST00000624700 ZCCHC2Q9C0B9 1178 aaKnown RBP7.7□□□□□ -1.18
CDKL5-207ENST00000624700 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.7□□□□□ -1.18
CDKL5-207ENST00000624700 PCDHGC4Q9Y5F7 938 aa7.7□□□□□ -1.18
CDKL5-207ENST00000624700 A6NJY4 79 aa7.69□□□□□ -1.18
CDKL5-207ENST00000624700 PIK3R2O00459 728 aa7.69□□□□□ -1.18
CDKL5-207ENST00000624700 CDK2AP1O14519 115 aa7.69□□□□□ -1.18
CDKL5-207ENST00000624700 ARAFP10398 606 aa7.69□□□□□ -1.18
CDKL5-207ENST00000624700 HOXB4P17483 251 aaPredicted RBP7.69□□□□□ -1.18
CDKL5-207ENST00000624700 FAM69CQ0P6D2 419 aa7.69□□□□□ -1.18
CDKL5-207ENST00000624700 NLRP8Q86W28 1048 aa7.69□□□□□ -1.18
CDKL5-207ENST00000624700 EPXP11678 715 aa7.68□□□□□ -1.18
CDKL5-207ENST00000624700 ATP4AP20648 1035 aa7.68□□□□□ -1.18
CDKL5-207ENST00000624700 AIDAQ96BJ3 306 aa7.68□□□□□ -1.18
CDKL5-207ENST00000624700 BTBD6Q96KE9 485 aa7.68□□□□□ -1.18
CDKL5-207ENST00000624700 MTMR7Q9Y216 660 aa7.68□□□□□ -1.18
CDKL5-207ENST00000624700 CHMP3Q9Y3E7 222 aa7.68□□□□□ -1.18
CDKL5-207ENST00000624700 K7ELQ4 463 aaPredicted RBP7.67□□□□□ -1.18
CDKL5-207ENST00000624700 GNB5O14775 395 aa7.67□□□□□ -1.18
CDKL5-207ENST00000624700 ATXN7O15265 892 aaPredicted RBP7.67□□□□□ -1.18
CDKL5-207ENST00000624700 BAG6P46379 1132 aa7.67□□□□□ -1.18
CDKL5-207ENST00000624700 MTFR1Q15390 333 aa7.67□□□□□ -1.18
CDKL5-207ENST00000624700 SERTAD1Q9UHV2 236 aa7.67□□□□□ -1.18
CDKL5-207ENST00000624700 NEURL1BA8MQ27 555 aa7.66□□□□□ -1.18
CDKL5-207ENST00000624700 IGFBP4P22692 258 aa7.66□□□□□ -1.18
CDKL5-207ENST00000624700 KCNA1Q09470 495 aa7.66□□□□□ -1.18
CDKL5-207ENST00000624700 GRIN2CQ14957 1233 aa7.66□□□□□ -1.18
CDKL5-207ENST00000624700 NBPF1Q3BBV0 1214 aa7.66□□□□□ -1.18
CDKL5-207ENST00000624700 ARSJQ5FYB0 599 aaPredicted RBP7.66□□□□□ -1.18
CDKL5-207ENST00000624700 STAG2Q8N3U4 1231 aa7.66□□□□□ -1.18
CDKL5-207ENST00000624700 TSEN2Q8NCE0 465 aaKnown RBP7.66□□□□□ -1.18
CDKL5-207ENST00000624700 SCHIP1Q9P0W5 487 aaPredicted RBP7.66□□□□□ -1.18
CDKL5-207ENST00000624700 ATAD2Q6PL18 1390 aa7.66□□□□□ -1.18
CDKL5-207ENST00000624700 A0A1W2PNR3 127 aa7.65□□□□□ -1.18
CDKL5-207ENST00000624700 ZBTB7CA1YPR0 619 aa7.65□□□□□ -1.18
CDKL5-207ENST00000624700 ATP2B4P23634 1241 aa7.65□□□□□ -1.18
CDKL5-207ENST00000624700 SSFA2P28290 1259 aa7.65□□□□□ -1.18
CDKL5-207ENST00000624700 ARID4AP29374 1257 aaPredicted RBP7.65□□□□□ -1.18
CDKL5-207ENST00000624700 WEE1P30291 646 aa7.65□□□□□ -1.18
CDKL5-207ENST00000624700 SUV39H2Q9H5I1 410 aa7.65□□□□□ -1.18
CDKL5-207ENST00000624700 FOXO3O43524 673 aa7.64□□□□□ -1.19
CDKL5-207ENST00000624700 PTCD1O75127 700 aaKnown RBP7.64□□□□□ -1.19
CDKL5-207ENST00000624700 MAPTP10636 758 aaKnown RBP7.64□□□□□ -1.19
CDKL5-207ENST00000624700 TATP17735 454 aaPredicted RBP7.64□□□□□ -1.19
CDKL5-207ENST00000624700 ADH6P28332 368 aa7.64□□□□□ -1.19
CDKL5-207ENST00000624700 TNP2Q05952 138 aa7.64□□□□□ -1.19
CDKL5-207ENST00000624700 FAM182BQ5T319 152 aa7.64□□□□□ -1.19
CDKL5-207ENST00000624700 TNS4Q8IZW8 715 aa7.64□□□□□ -1.19
CDKL5-207ENST00000624700 ZNF295-AS1Q8N0V1 137 aa7.64□□□□□ -1.19
CDKL5-207ENST00000624700 DGKGP49619 791 aa7.63□□□□□ -1.19
CDKL5-207ENST00000624700 EPHA4P54764 986 aa7.63□□□□□ -1.19
CDKL5-207ENST00000624700 XP32Q5T750 250 aa7.63□□□□□ -1.19
CDKL5-207ENST00000624700 CCER1Q8TC90 406 aaPredicted RBP7.63□□□□□ -1.19
CDKL5-207ENST00000624700 COL26A1Q96A83 441 aa7.63□□□□□ -1.19
CDKL5-207ENST00000624700 VTI1AQ96AJ9 217 aa7.63□□□□□ -1.19
CDKL5-207ENST00000624700 AVENQ9NQS1 362 aaPredicted RBP7.63□□□□□ -1.19
CDKL5-207ENST00000624700 ZDHHC3Q9NYG2 299 aa7.63□□□□□ -1.19
CDKL5-207ENST00000624700 NOP53Q9NZM5 478 aaKnown RBP7.63□□□□□ -1.19
CDKL5-207ENST00000624700 CXXC1Q9P0U4 656 aaPredicted RBP7.63□□□□□ -1.19
CDKL5-207ENST00000624700 IQSEC3Q9UPP2 1182 aaPredicted RBP7.63□□□□□ -1.19
CDKL5-207ENST00000624700 DCDC2BA2VCK2 349 aa7.62□□□□□ -1.19
CDKL5-207ENST00000624700 PRMT3O60678 531 aa7.62□□□□□ -1.19
CDKL5-207ENST00000624700 CD33P20138 364 aa7.62□□□□□ -1.19
CDKL5-207ENST00000624700 PSMA6P60900 246 aaKnown RBP7.62□□□□□ -1.19
CDKL5-207ENST00000624700 SCG3Q8WXD2 468 aaKnown RBP7.62□□□□□ -1.19
CDKL5-207ENST00000624700 KHNYNO15037 678 aaKnown RBP7.61□□□□□ -1.19
CDKL5-207ENST00000624700 PPP1R12BO60237 982 aaPredicted RBP7.61□□□□□ -1.19
CDKL5-207ENST00000624700 FURINP09958 794 aa7.61□□□□□ -1.19
CDKL5-207ENST00000624700 TEAD4Q15561 434 aa7.61□□□□□ -1.19
CDKL5-207ENST00000624700 OCLNQ16625 522 aa7.61□□□□□ -1.19
CDKL5-207ENST00000624700 CHSY3Q70JA7 882 aa7.61□□□□□ -1.19
CDKL5-207ENST00000624700 AEBP1Q8IUX7 1158 aa7.61□□□□□ -1.19
CDKL5-207ENST00000624700 PRIMPOLQ96LW4 560 aa7.61□□□□□ -1.19
CDKL5-207ENST00000624700 ZIC5Q96T25 663 aa7.61□□□□□ -1.19
CDKL5-207ENST00000624700 CABP1Q9NZU7 370 aa7.61□□□□□ -1.19
CDKL5-207ENST00000624700 KLF15Q9UIH9 416 aa7.61□□□□□ -1.19
CDKL5-207ENST00000624700 HCN2Q9UL51 889 aa7.61□□□□□ -1.19
CDKL5-207ENST00000624700 GJA3Q9Y6H8 435 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms