RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 LRRC8AQ8IWT6 810 aa17.94■□□□□ 0.46
PMS1-221ENST00000624204 USP16Q9Y5T5 823 aa17.94■□□□□ 0.46
PMS1-221ENST00000624204 CCDC171Q6TFL3 1326 aa17.94■□□□□ 0.46
PMS1-221ENST00000624204 SGSM2O43147 1006 aa17.94■□□□□ 0.46
PMS1-221ENST00000624204 SLU7O95391 586 aaKnown RBP17.94■□□□□ 0.46
PMS1-221ENST00000624204 LRRFIP2Q9Y608 721 aaKnown RBP17.94■□□□□ 0.46
PMS1-221ENST00000624204 NPATQ14207 1427 aa17.93■□□□□ 0.46
PMS1-221ENST00000624204 ERCC6LQ2NKX8 1250 aa17.93■□□□□ 0.46
PMS1-221ENST00000624204 FMNL2Q96PY5 1086 aa17.93■□□□□ 0.46
PMS1-221ENST00000624204 HYPKQ9NX55 129 aa17.93■□□□□ 0.46
PMS1-221ENST00000624204 STAG3Q9UJ98 1225 aa17.93■□□□□ 0.46
PMS1-221ENST00000624204 CAMSAP1Q5T5Y3 1602 aa17.93■□□□□ 0.46
PMS1-221ENST00000624204 PRPF40BQ6NWY9 871 aaKnown RBP17.93■□□□□ 0.46
PMS1-221ENST00000624204 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.93■□□□□ 0.46
PMS1-221ENST00000624204 KIAA0232Q92628 1395 aa17.93■□□□□ 0.46
PMS1-221ENST00000624204 NCKAP5LQ9HCH0 1330 aa17.92■□□□□ 0.46
PMS1-221ENST00000624204 CHL1O00533 1208 aa17.92■□□□□ 0.46
PMS1-221ENST00000624204 ADCK5Q3MIX3 580 aa17.92■□□□□ 0.46
PMS1-221ENST00000624204 FAM177A1Q8N128 213 aaPredicted RBP17.92■□□□□ 0.46
PMS1-221ENST00000624204 CD163L1Q9NR16 1453 aa17.92■□□□□ 0.46
PMS1-221ENST00000624204 BMS1Q14692 1282 aaKnown RBP17.92■□□□□ 0.46
PMS1-221ENST00000624204 SKIDA1Q1XH10 827 aa17.92■□□□□ 0.46
PMS1-221ENST00000624204 TDRD7Q8NHU6 1098 aaKnown RBP17.92■□□□□ 0.46
PMS1-221ENST00000624204 ZNF446Q9NWS9 450 aa17.92■□□□□ 0.46
PMS1-221ENST00000624204 YTHDC2Q9H6S0 1430 aaKnown RBP17.92■□□□□ 0.46
PMS1-221ENST00000624204 BECN2A8MW95 431 aa17.91■□□□□ 0.46
PMS1-221ENST00000624204 NR1I2O75469 434 aa17.91■□□□□ 0.46
PMS1-221ENST00000624204 SURF6O75683 361 aaKnown RBP17.91■□□□□ 0.46
PMS1-221ENST00000624204 PAXIP1Q6ZW49 1069 aaPredicted RBP17.91■□□□□ 0.46
PMS1-221ENST00000624204 CCDC69A6NI79 296 aa17.91■□□□□ 0.46
PMS1-221ENST00000624204 HTATSF1O43719 755 aaKnown RBP17.91■□□□□ 0.46
PMS1-221ENST00000624204 DDX11Q96FC9 970 aa17.91■□□□□ 0.46
PMS1-221ENST00000624204 LSG1Q9H089 658 aaKnown RBP17.91■□□□□ 0.46
PMS1-221ENST00000624204 STAP2Q9UGK3 403 aa17.91■□□□□ 0.46
PMS1-221ENST00000624204 CYP46A1Q9Y6A2 500 aa17.91■□□□□ 0.46
PMS1-221ENST00000624204 ABCC3O15438 1527 aa17.91■□□□□ 0.46
PMS1-221ENST00000624204 GNAI3P08754 354 aa17.91■□□□□ 0.46
PMS1-221ENST00000624204 ME3Q16798 604 aa17.91■□□□□ 0.46
PMS1-221ENST00000624204 STK31Q9BXU1 1019 aa17.91■□□□□ 0.46
PMS1-221ENST00000624204 CCDC9Q9Y3X0 531 aaKnown RBP17.91■□□□□ 0.46
PMS1-221ENST00000624204 ATP8B2P98198 1209 aa17.9■□□□□ 0.46
PMS1-221ENST00000624204 DDX19AQ9NUU7 478 aaKnown RBP17.9■□□□□ 0.46
PMS1-221ENST00000624204 TSPYL4Q9UJ04 414 aa17.9■□□□□ 0.46
PMS1-221ENST00000624204 WAPLQ7Z5K2 1190 aa17.9■□□□□ 0.46
PMS1-221ENST00000624204 NEK11Q8NG66 645 aa17.9■□□□□ 0.46
PMS1-221ENST00000624204 CNTROBQ8N137 903 aa17.89■□□□□ 0.45
PMS1-221ENST00000624204 ARHGEF28Q8N1W1 1705 aaKnown RBP17.89■□□□□ 0.45
PMS1-221ENST00000624204 MROH1Q8NDA8 1641 aa17.89■□□□□ 0.45
PMS1-221ENST00000624204 CYP2C19P33261 490 aa17.88■□□□□ 0.45
PMS1-221ENST00000624204 CLSTN2Q9H4D0 955 aa17.88■□□□□ 0.45
PMS1-221ENST00000624204 ZCCHC11Q5TAX3 1644 aaKnown RBP17.88■□□□□ 0.45
PMS1-221ENST00000624204 COG3Q96JB2 828 aa17.88■□□□□ 0.45
PMS1-221ENST00000624204 SH2B1Q9NRF2 756 aaPredicted RBP17.88■□□□□ 0.45
PMS1-221ENST00000624204 FOXO3O43524 673 aa17.88■□□□□ 0.45
PMS1-221ENST00000624204 NYAP1Q6ZVC0 841 aa17.88■□□□□ 0.45
PMS1-221ENST00000624204 IL17RAQ96F46 866 aa17.88■□□□□ 0.45
PMS1-221ENST00000624204 ZSCAN31Q96LW9 406 aaPredicted RBP17.88■□□□□ 0.45
PMS1-221ENST00000624204 SCAND2PQ9GZW5 306 aaPredicted RBP17.88■□□□□ 0.45
PMS1-221ENST00000624204 PPLO60437 1756 aa17.88■□□□□ 0.45
PMS1-221ENST00000624204 TULP2O00295 520 aa17.87■□□□□ 0.45
PMS1-221ENST00000624204 NPHP3Q7Z494 1330 aa17.87■□□□□ 0.45
PMS1-221ENST00000624204 PTH1RQ03431 593 aa17.87■□□□□ 0.45
PMS1-221ENST00000624204 RAD51AP2Q09MP3 1159 aa17.87■□□□□ 0.45
PMS1-221ENST00000624204 ERCC6L2Q5T890 1561 aa17.87■□□□□ 0.45
PMS1-221ENST00000624204 CPSF1Q10570 1443 aaKnown RBP17.87■□□□□ 0.45
PMS1-221ENST00000624204 PTPN21Q16825 1174 aa17.86■□□□□ 0.45
PMS1-221ENST00000624204 ARHGAP29Q52LW3 1261 aa17.86■□□□□ 0.45
PMS1-221ENST00000624204 CCAR2Q8N163 923 aaKnown RBP17.86■□□□□ 0.45
PMS1-221ENST00000624204 LRRN4CLQ8ND94 238 aa17.86■□□□□ 0.45
PMS1-221ENST00000624204 LEO1Q8WVC0 666 aaPredicted RBP17.86■□□□□ 0.45
PMS1-221ENST00000624204 KIF1BPQ96EK5 621 aa17.86■□□□□ 0.45
PMS1-221ENST00000624204 CLCN6P51797 869 aa17.86■□□□□ 0.45
PMS1-221ENST00000624204 ST3GAL1Q11201 340 aa17.86■□□□□ 0.45
PMS1-221ENST00000624204 SNW1Q13573 536 aaKnown RBP17.86■□□□□ 0.45
PMS1-221ENST00000624204 SYT10Q6XYQ8 523 aa17.86■□□□□ 0.45
PMS1-221ENST00000624204 UBTFL1P0CB47 393 aaPredicted RBP17.86■□□□□ 0.45
PMS1-221ENST00000624204 IDI1Q13907 227 aa17.86■□□□□ 0.45
PMS1-221ENST00000624204 TEX35Q5T0J7 233 aa17.86■□□□□ 0.45
PMS1-221ENST00000624204 VPS53Q5VIR6 699 aa17.86■□□□□ 0.45
PMS1-221ENST00000624204 RAB11FIP3O75154 756 aa17.85■□□□□ 0.45
PMS1-221ENST00000624204 C11orf57Q6ZUT1 292 aaPredicted RBP17.85■□□□□ 0.45
PMS1-221ENST00000624204 FEZ2Q9UHY8 353 aaPredicted RBP17.85■□□□□ 0.45
PMS1-221ENST00000624204 TPCN1Q9ULQ1 816 aa17.85■□□□□ 0.45
PMS1-221ENST00000624204 NEMFO60524 1076 aa17.85■□□□□ 0.45
PMS1-221ENST00000624204 SLC20A2Q08357 652 aa17.85■□□□□ 0.45
PMS1-221ENST00000624204 KLHL34Q8N239 644 aa17.85■□□□□ 0.45
PMS1-221ENST00000624204 CHMP4CQ96CF2 233 aa17.85■□□□□ 0.45
PMS1-221ENST00000624204 CDC42BPGQ6DT37 1551 aa17.85■□□□□ 0.45
PMS1-221ENST00000624204 ZKSCAN1P17029 563 aaPredicted RBP17.85■□□□□ 0.45
PMS1-221ENST00000624204 FLIIQ13045 1269 aa17.85■□□□□ 0.45
PMS1-221ENST00000624204 FAM53CQ9NYF3 392 aa17.85■□□□□ 0.45
PMS1-221ENST00000624204 PNMA6AP0CW24 399 aaPredicted RBP17.84■□□□□ 0.45
PMS1-221ENST00000624204 PDCP20941 246 aa17.84■□□□□ 0.45
PMS1-221ENST00000624204 SLFNL1Q499Z3 407 aa17.84■□□□□ 0.45
PMS1-221ENST00000624204 LARP1Q6PKG0 1096 aaKnown RBP17.84■□□□□ 0.45
PMS1-221ENST00000624204 HOMER1Q86YM7 354 aa17.84■□□□□ 0.45
PMS1-221ENST00000624204 PPP6R1Q9UPN7 881 aa17.84■□□□□ 0.45
PMS1-221ENST00000624204 FHOD1Q9Y613 1164 aa17.84■□□□□ 0.45
PMS1-221ENST00000624204 ELP1O95163 1332 aa17.84■□□□□ 0.45
PMS1-221ENST00000624204 ERBB3P21860 1342 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms