RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 UHRF1BP1Q6BDS2 1440 aa18.88■□□□□ 0.61
GABRB3-215ENST00000622697 KRT28Q7Z3Y7 464 aa18.87■□□□□ 0.61
GABRB3-215ENST00000622697 TANGO6Q9C0B7 1094 aa18.87■□□□□ 0.61
GABRB3-215ENST00000622697 PTPN14Q15678 1187 aa18.87■□□□□ 0.61
GABRB3-215ENST00000622697 NEK1Q96PY6 1258 aa18.87■□□□□ 0.61
GABRB3-215ENST00000622697 ZSCAN22P10073 491 aaPredicted RBP18.87■□□□□ 0.61
GABRB3-215ENST00000622697 CBX1P83916 185 aa18.87■□□□□ 0.61
GABRB3-215ENST00000622697 LRSAM1Q6UWE0 723 aa18.87■□□□□ 0.61
GABRB3-215ENST00000622697 KLHL34Q8N239 644 aa18.87■□□□□ 0.61
GABRB3-215ENST00000622697 SFPQP23246 707 aaKnown RBP eCLIP18.87■□□□□ 0.61
GABRB3-215ENST00000622697 UBE2HP62256 183 aa18.87■□□□□ 0.61
GABRB3-215ENST00000622697 TRMT112Q9UI30 125 aaKnown RBP18.87■□□□□ 0.61
GABRB3-215ENST00000622697 ZBTB7BO15156 539 aaPredicted RBP18.86■□□□□ 0.61
GABRB3-215ENST00000622697 SSBP05455 408 aaKnown RBP eCLIP18.86■□□□□ 0.61
GABRB3-215ENST00000622697 LRRC59Q96AG4 307 aaKnown RBP18.86■□□□□ 0.61
GABRB3-215ENST00000622697 TMX1Q9H3N1 280 aa18.86■□□□□ 0.61
GABRB3-215ENST00000622697 HMGB1P09429 215 aaKnown RBP18.85■□□□□ 0.61
GABRB3-215ENST00000622697 PRIM1P49642 420 aaKnown RBP18.85■□□□□ 0.61
GABRB3-215ENST00000622697 DEF6Q9H4E7 631 aa18.85■□□□□ 0.61
GABRB3-215ENST00000622697 BRF1Q92994 677 aa18.85■□□□□ 0.61
GABRB3-215ENST00000622697 STIM1Q13586 685 aa18.85■□□□□ 0.61
GABRB3-215ENST00000622697 RAB3GAP1Q15042 981 aa18.85■□□□□ 0.61
GABRB3-215ENST00000622697 AXDND1Q5T1B0 1012 aaPredicted RBP18.85■□□□□ 0.61
GABRB3-215ENST00000622697 RBM8AQ9Y5S9 174 aaKnown RBP18.85■□□□□ 0.61
GABRB3-215ENST00000622697 SOGA3Q5TF21 947 aa18.85■□□□□ 0.61
GABRB3-215ENST00000622697 WASF1Q92558 559 aa18.85■□□□□ 0.61
GABRB3-215ENST00000622697 RNF123Q5XPI4 1314 aa18.85■□□□□ 0.61
GABRB3-215ENST00000622697 G2E3Q7L622 706 aa18.84■□□□□ 0.61
GABRB3-215ENST00000622697 ERCC4Q92889 916 aaPredicted RBP18.84■□□□□ 0.61
GABRB3-215ENST00000622697 SHANK2Q9UPX8 1470 aa18.84■□□□□ 0.61
GABRB3-215ENST00000622697 DISP1Q96F81 1524 aa18.84■□□□□ 0.61
GABRB3-215ENST00000622697 XAGE3Q8WTP9 111 aa18.84■□□□□ 0.61
GABRB3-215ENST00000622697 TRIM35Q9UPQ4 493 aa18.84■□□□□ 0.61
GABRB3-215ENST00000622697 ZMYM4Q5VZL5 1548 aa18.84■□□□□ 0.61
GABRB3-215ENST00000622697 ZNF165P49910 485 aa18.84■□□□□ 0.61
GABRB3-215ENST00000622697 ANKRD13DQ6ZTN6 518 aa18.84■□□□□ 0.61
GABRB3-215ENST00000622697 COPS6Q7L5N1 327 aa18.84■□□□□ 0.61
GABRB3-215ENST00000622697 USP16Q9Y5T5 823 aa18.84■□□□□ 0.61
GABRB3-215ENST00000622697 TNNT1P13805 278 aa18.83■□□□□ 0.61
GABRB3-215ENST00000622697 ZFYVE27Q5T4F4 411 aa18.83■□□□□ 0.61
GABRB3-215ENST00000622697 DDX19AQ9NUU7 478 aaKnown RBP18.83■□□□□ 0.61
GABRB3-215ENST00000622697 MAGI3Q5TCQ9 1506 aa18.83■□□□□ 0.6
GABRB3-215ENST00000622697 DNM1Q05193 864 aaKnown RBP18.83■□□□□ 0.6
GABRB3-215ENST00000622697 DHX8Q14562 1220 aaKnown RBP18.82■□□□□ 0.6
GABRB3-215ENST00000622697 CWF19L2Q2TBE0 894 aaKnown RBP18.82■□□□□ 0.6
GABRB3-215ENST00000622697 IFNL2Q8IZJ0 200 aa18.82■□□□□ 0.6
GABRB3-215ENST00000622697 PHAXQ9H814 394 aaKnown RBP18.82■□□□□ 0.6
GABRB3-215ENST00000622697 SLC12A7Q9Y666 1083 aa18.82■□□□□ 0.6
GABRB3-215ENST00000622697 IFIT3O14879 490 aaKnown RBP18.82■□□□□ 0.6
GABRB3-215ENST00000622697 RANBP6O60518 1105 aaKnown RBP18.82■□□□□ 0.6
GABRB3-215ENST00000622697 ERICH4A6NGS2 130 aa18.82■□□□□ 0.6
GABRB3-215ENST00000622697 UBXN4Q92575 508 aa18.82■□□□□ 0.6
GABRB3-215ENST00000622697 PRM3Q9NNZ6 103 aa18.82■□□□□ 0.6
GABRB3-215ENST00000622697 RIMS2Q9UQ26 1411 aa18.82■□□□□ 0.6
GABRB3-215ENST00000622697 LDHAL6AQ6ZMR3 332 aa18.81■□□□□ 0.6
GABRB3-215ENST00000622697 MICU3Q86XE3 530 aa18.81■□□□□ 0.6
GABRB3-215ENST00000622697 EYA1Q99502 592 aa18.81■□□□□ 0.6
GABRB3-215ENST00000622697 USP26Q9BXU7 913 aa18.81■□□□□ 0.6
GABRB3-215ENST00000622697 CWC25Q9NXE8 425 aaPredicted RBP18.81■□□□□ 0.6
GABRB3-215ENST00000622697 TNRQ92752 1358 aa18.81■□□□□ 0.6
GABRB3-215ENST00000622697 GOLGA8AA7E2F4 631 aa18.81■□□□□ 0.6
GABRB3-215ENST00000622697 USP5P45974 858 aa18.81■□□□□ 0.6
GABRB3-215ENST00000622697 MSH6P52701 1360 aa18.81■□□□□ 0.6
GABRB3-215ENST00000622697 CPLX3Q8WVH0 158 aa18.81■□□□□ 0.6
GABRB3-215ENST00000622697 NOM1Q5C9Z4 860 aaKnown RBP18.81■□□□□ 0.6
GABRB3-215ENST00000622697 CPA1P15085 419 aa18.8■□□□□ 0.6
GABRB3-215ENST00000622697 FAM193AP78312 1265 aa18.8■□□□□ 0.6
GABRB3-215ENST00000622697 MAP3K12Q12852 859 aa18.8■□□□□ 0.6
GABRB3-215ENST00000622697 ORC3Q9UBD5 711 aaPredicted RBP18.8■□□□□ 0.6
GABRB3-215ENST00000622697 ZNF518AQ6AHZ1 1483 aa18.8■□□□□ 0.6
GABRB3-215ENST00000622697 EPB41L2O43491 1005 aaKnown RBP18.8■□□□□ 0.6
GABRB3-215ENST00000622697 DTNBO60941 627 aa18.8■□□□□ 0.6
GABRB3-215ENST00000622697 PKNOX2Q96KN3 472 aa18.8■□□□□ 0.6
GABRB3-215ENST00000622697 CCDC66A2RUB6 948 aa18.8■□□□□ 0.6
GABRB3-215ENST00000622697 URI1O94763 535 aaPredicted RBP18.8■□□□□ 0.6
GABRB3-215ENST00000622697 ABCC1P33527 1531 aa18.8■□□□□ 0.6
GABRB3-215ENST00000622697 ANKRD18BA2A2Z9 1011 aa18.8■□□□□ 0.6
GABRB3-215ENST00000622697 CNNM3Q8NE01 707 aa18.8■□□□□ 0.6
GABRB3-215ENST00000622697 GRM8O00222 908 aa18.79■□□□□ 0.6
GABRB3-215ENST00000622697 NMIQ13287 307 aaPredicted RBP18.79■□□□□ 0.6
GABRB3-215ENST00000622697 ARHGAP29Q52LW3 1261 aa18.79■□□□□ 0.6
GABRB3-215ENST00000622697 WDR7Q9Y4E6 1490 aa18.79■□□□□ 0.6
GABRB3-215ENST00000622697 SNRPA1P09661 255 aaKnown RBP18.79■□□□□ 0.6
GABRB3-215ENST00000622697 AK2P54819 239 aa18.79■□□□□ 0.6
GABRB3-215ENST00000622697 TOP1P11387 765 aaKnown RBP18.79■□□□□ 0.6
GABRB3-215ENST00000622697 RBM5P52756 815 aaKnown RBP eCLIP18.79■□□□□ 0.6
GABRB3-215ENST00000622697 TMC6Q7Z403 805 aa18.79■□□□□ 0.6
GABRB3-215ENST00000622697 NPATQ14207 1427 aa18.79■□□□□ 0.6
GABRB3-215ENST00000622697 EIF5P55010 431 aaKnown RBP18.79■□□□□ 0.6
GABRB3-215ENST00000622697 PIP4K2BP78356 416 aa18.79■□□□□ 0.6
GABRB3-215ENST00000622697 SLC4A8Q2Y0W8 1093 aa18.79■□□□□ 0.6
GABRB3-215ENST00000622697 CEP131Q9UPN4 1083 aa18.79■□□□□ 0.6
GABRB3-215ENST00000622697 CCDC181Q5TID7 509 aa18.78■□□□□ 0.6
GABRB3-215ENST00000622697 KIF18AQ8NI77 898 aa18.78■□□□□ 0.6
GABRB3-215ENST00000622697 SSRP1Q08945 709 aaKnown RBP18.78■□□□□ 0.6
GABRB3-215ENST00000622697 TTC21AQ8NDW8 1320 aa18.78■□□□□ 0.6
GABRB3-215ENST00000622697 CTAGE5O15320 804 aa18.77■□□□□ 0.6
GABRB3-215ENST00000622697 CHMLP26374 656 aa18.77■□□□□ 0.6
GABRB3-215ENST00000622697 CLCN1P35523 988 aa18.77■□□□□ 0.6
GABRB3-215ENST00000622697 ANAPC15P60006 121 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms