RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 IGKV5-2P06315 115 aa14.53□□□□□ -0.08
TP53-227ENST00000622645 ZNF496Q96IT1 587 aaPredicted RBP14.53□□□□□ -0.08
TP53-227ENST00000622645 ISY1Q9ULR0 285 aaKnown RBP14.53□□□□□ -0.08
TP53-227ENST00000622645 SPG7Q9UQ90 795 aa14.53□□□□□ -0.08
TP53-227ENST00000622645 GLRX3O76003 335 aaKnown RBP14.52□□□□□ -0.08
TP53-227ENST00000622645 NCLP19338 710 aaKnown RBP14.52□□□□□ -0.08
TP53-227ENST00000622645 PIP4K2AP48426 406 aaPredicted RBP14.52□□□□□ -0.08
TP53-227ENST00000622645 CUL4AQ13619 759 aa14.52□□□□□ -0.08
TP53-227ENST00000622645 TTC41PQ6P2S7 1318 aa14.52□□□□□ -0.08
TP53-227ENST00000622645 PRPF40AO75400 957 aaKnown RBP14.52□□□□□ -0.09
TP53-227ENST00000622645 IL17RAQ96F46 866 aa14.52□□□□□ -0.09
TP53-227ENST00000622645 MEGF6O75095 1541 aa14.52□□□□□ -0.09
TP53-227ENST00000622645 RAD50Q92878 1312 aa14.52□□□□□ -0.09
TP53-227ENST00000622645 USP42Q9H9J4 1324 aaKnown RBP14.52□□□□□ -0.09
TP53-227ENST00000622645 KIF1AQ12756 1690 aa14.52□□□□□ -0.09
TP53-227ENST00000622645 IFIT2P09913 472 aaKnown RBP14.51□□□□□ -0.09
TP53-227ENST00000622645 COPS6Q7L5N1 327 aa14.51□□□□□ -0.09
TP53-227ENST00000622645 XAGE3Q8WTP9 111 aa14.51□□□□□ -0.09
TP53-227ENST00000622645 LSG1Q9H089 658 aaKnown RBP14.51□□□□□ -0.09
TP53-227ENST00000622645 ECHDC1Q9NTX5 307 aa14.51□□□□□ -0.09
TP53-227ENST00000622645 USP16Q9Y5T5 823 aa14.51□□□□□ -0.09
TP53-227ENST00000622645 AACSQ86V21 672 aa14.51□□□□□ -0.09
TP53-227ENST00000622645 RASEFQ8IZ41 740 aa14.51□□□□□ -0.09
TP53-227ENST00000622645 IFNL2Q8IZJ0 200 aa14.51□□□□□ -0.09
TP53-227ENST00000622645 HDAC5Q9UQL6 1122 aa14.51□□□□□ -0.09
TP53-227ENST00000622645 ALS2Q96Q42 1657 aa14.51□□□□□ -0.09
TP53-227ENST00000622645 CYP27B1O15528 508 aa14.5□□□□□ -0.09
TP53-227ENST00000622645 SASH1O94885 1247 aa14.5□□□□□ -0.09
TP53-227ENST00000622645 KLHDC4Q8TBB5 520 aa14.5□□□□□ -0.09
TP53-227ENST00000622645 SIPA1L3O60292 1781 aaPredicted RBP14.5□□□□□ -0.09
TP53-227ENST00000622645 UTYO14607 1347 aa14.5□□□□□ -0.09
TP53-227ENST00000622645 EPB41L2O43491 1005 aaKnown RBP14.5□□□□□ -0.09
TP53-227ENST00000622645 CAVIN1Q6NZI2 390 aaKnown RBP14.5□□□□□ -0.09
TP53-227ENST00000622645 ERC1Q8IUD2 1116 aa14.5□□□□□ -0.09
TP53-227ENST00000622645 SIL1Q9H173 461 aa14.5□□□□□ -0.09
TP53-227ENST00000622645 RRAGDQ9NQL2 400 aaPredicted RBP14.5□□□□□ -0.09
TP53-227ENST00000622645 SNX14Q9Y5W7 946 aa14.5□□□□□ -0.09
TP53-227ENST00000622645 LARP1Q6PKG0 1096 aaKnown RBP14.49□□□□□ -0.09
TP53-227ENST00000622645 KIAA1211Q6ZU35 1233 aa14.49□□□□□ -0.09
TP53-227ENST00000622645 EAF2Q96CJ1 260 aaPredicted RBP14.49□□□□□ -0.09
TP53-227ENST00000622645 DIAPH3Q9NSV4 1193 aa14.49□□□□□ -0.09
TP53-227ENST00000622645 JARID2Q92833 1246 aaPredicted RBP14.49□□□□□ -0.09
TP53-227ENST00000622645 INTS4Q96HW7 963 aaKnown RBP14.49□□□□□ -0.09
TP53-227ENST00000622645 MYD88Q99836 296 aa14.49□□□□□ -0.09
TP53-227ENST00000622645 LARP6Q9BRS8 491 aaKnown RBP14.49□□□□□ -0.09
TP53-227ENST00000622645 CCDC8Q9H0W5 538 aaPredicted RBP14.49□□□□□ -0.09
TP53-227ENST00000622645 ADAMTS7Q9UKP4 1686 aa14.49□□□□□ -0.09
TP53-227ENST00000622645 NEURL1BA8MQ27 555 aa14.49□□□□□ -0.09
TP53-227ENST00000622645 NEXNQ0ZGT2 675 aa14.49□□□□□ -0.09
TP53-227ENST00000622645 G3BP1Q13283 466 aaKnown RBP eCLIP14.49□□□□□ -0.092e-6■□□□□ 9.5
TP53-227ENST00000622645 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.49□□□□□ -0.09
TP53-227ENST00000622645 BRD1O95696 1058 aa14.48□□□□□ -0.09
TP53-227ENST00000622645 GCKRQ14397 625 aa14.48□□□□□ -0.09
TP53-227ENST00000622645 EPHA10Q5JZY3 1008 aa14.48□□□□□ -0.09
TP53-227ENST00000622645 TTC5Q8N0Z6 440 aa14.48□□□□□ -0.09
TP53-227ENST00000622645 GPT2Q8TD30 523 aa14.48□□□□□ -0.09
TP53-227ENST00000622645 PTH1RQ03431 593 aa14.48□□□□□ -0.09
TP53-227ENST00000622645 CADPS2Q86UW7 1296 aa14.48□□□□□ -0.09
TP53-227ENST00000622645 GPATCH3Q96I76 525 aa14.48□□□□□ -0.09
TP53-227ENST00000622645 DCAF5Q96JK2 942 aa14.48□□□□□ -0.09
TP53-227ENST00000622645 TLR7Q9NYK1 1049 aaKnown RBP14.48□□□□□ -0.09
TP53-227ENST00000622645 SNRPA1P09661 255 aaKnown RBP14.47□□□□□ -0.09
TP53-227ENST00000622645 CPA1P15085 419 aa14.47□□□□□ -0.09
TP53-227ENST00000622645 ANKRD13DQ6ZTN6 518 aa14.47□□□□□ -0.09
TP53-227ENST00000622645 METTL22Q9BUU2 404 aaPredicted RBP14.47□□□□□ -0.09
TP53-227ENST00000622645 LMTK3Q96Q04 1460 aa14.47□□□□□ -0.09
TP53-227ENST00000622645 LRP10Q7Z4F1 713 aa14.47□□□□□ -0.09
TP53-227ENST00000622645 HSPA2P54652 639 aa14.46□□□□□ -0.09
TP53-227ENST00000622645 ZSCAN23Q3MJ62 389 aa14.46□□□□□ -0.09
TP53-227ENST00000622645 FOXD4L6Q3SYB3 417 aaPredicted RBP14.46□□□□□ -0.09
TP53-227ENST00000622645 FOXD4L3Q6VB84 417 aaPredicted RBP14.46□□□□□ -0.09
TP53-227ENST00000622645 RBM27Q9P2N5 1060 aaKnown RBP14.46□□□□□ -0.09
TP53-227ENST00000622645 RUFY2Q8WXA3 655 aa14.46□□□□□ -0.1
TP53-227ENST00000622645 EVI5LQ96CN4 794 aa14.46□□□□□ -0.1
TP53-227ENST00000622645 TTC14Q96N46 770 aa14.46□□□□□ -0.1
TP53-227ENST00000622645 NSFL1CQ9UNZ2 370 aaKnown RBP14.46□□□□□ -0.1
TP53-227ENST00000622645 SPATA31A3Q5VYP0 1347 aa14.45□□□□□ -0.1
TP53-227ENST00000622645 AK2P54819 239 aa14.45□□□□□ -0.1
TP53-227ENST00000622645 CABP4P57796 275 aa14.45□□□□□ -0.1
TP53-227ENST00000622645 C5P01031 1676 aa14.45□□□□□ -0.1
TP53-227ENST00000622645 TNS3Q68CZ2 1445 aa14.45□□□□□ -0.1
TP53-227ENST00000622645 SCN11AQ9UI33 1791 aa14.45□□□□□ -0.1
TP53-227ENST00000622645 FMNL2Q96PY5 1086 aa14.45□□□□□ -0.1
TP53-227ENST00000622645 BOLA2Q9H3K6 86 aa14.45□□□□□ -0.1
TP53-227ENST00000622645 ATP5J2-PTCD1G3V325 749 aa14.44□□□□□ -0.1
TP53-227ENST00000622645 PTCD1O75127 700 aaKnown RBP14.44□□□□□ -0.1
TP53-227ENST00000622645 ADCK5Q3MIX3 580 aa14.44□□□□□ -0.1
TP53-227ENST00000622645 PRPF40BQ6NWY9 871 aaKnown RBP14.44□□□□□ -0.1
TP53-227ENST00000622645 FAM227BQ96M60 508 aa14.44□□□□□ -0.1
TP53-227ENST00000622645 STRCP1A6NGW2 1772 aa14.44□□□□□ -0.1
TP53-227ENST00000622645 COL18A1P39060 1754 aa14.44□□□□□ -0.1
TP53-227ENST00000622645 CASTP20810 708 aaKnown RBP14.44□□□□□ -0.1
TP53-227ENST00000622645 ZNF445P59923 1031 aa14.44□□□□□ -0.1
TP53-227ENST00000622645 RUFY3Q7L099 469 aa14.44□□□□□ -0.1
TP53-227ENST00000622645 UBE3BQ7Z3V4 1068 aa14.43□□□□□ -0.1
TP53-227ENST00000622645 DDX54Q8TDD1 881 aaKnown RBP14.43□□□□□ -0.1
TP53-227ENST00000622645 DCCP43146 1447 aa14.43□□□□□ -0.1
TP53-227ENST00000622645 CRYBG1Q9Y4K1 1723 aa14.43□□□□□ -0.1
TP53-227ENST00000622645 NASPP49321 788 aaPredicted RBP14.43□□□□□ -0.1
TP53-227ENST00000622645 DTNBO60941 627 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms