RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 ZNF592Q92610 1267 aa9.87□□□□□ -0.83
PTPDC1-204ENST00000620992 DLG5Q8TDM6 1919 aa9.87□□□□□ -0.83
PTPDC1-204ENST00000620992 MX1P20591 662 aa9.87□□□□□ -0.83
PTPDC1-204ENST00000620992 TPM4P67936 248 aa9.87□□□□□ -0.83
PTPDC1-204ENST00000620992 LRRFIP2Q9Y608 721 aaKnown RBP9.87□□□□□ -0.83
PTPDC1-204ENST00000620992 KRT28Q7Z3Y7 464 aa9.86□□□□□ -0.83
PTPDC1-204ENST00000620992 NUTM1Q86Y26 1132 aa9.86□□□□□ -0.83
PTPDC1-204ENST00000620992 NUP133Q8WUM0 1156 aa9.86□□□□□ -0.83
PTPDC1-204ENST00000620992 EYA1Q99502 592 aa9.86□□□□□ -0.83
PTPDC1-204ENST00000620992 KIAA0232Q92628 1395 aa9.86□□□□□ -0.83
PTPDC1-204ENST00000620992 PNMA6EA0A0J9YXQ4 647 aa9.86□□□□□ -0.83
PTPDC1-204ENST00000620992 PAXIP1Q6ZW49 1069 aaPredicted RBP9.86□□□□□ -0.83
PTPDC1-204ENST00000620992 LMBRD1Q9NUN5 540 aa9.86□□□□□ -0.83
PTPDC1-204ENST00000620992 CEP126Q9P2H0 1117 aa9.86□□□□□ -0.83
PTPDC1-204ENST00000620992 AACSQ86V21 672 aa9.86□□□□□ -0.83
PTPDC1-204ENST00000620992 TMX3Q96JJ7 454 aa9.86□□□□□ -0.83
PTPDC1-204ENST00000620992 TTC39AQ5SRH9 613 aa9.85□□□□□ -0.83
PTPDC1-204ENST00000620992 TMOD3Q9NYL9 352 aa9.85□□□□□ -0.83
PTPDC1-204ENST00000620992 RAI14Q9P0K7 980 aa9.85□□□□□ -0.83
PTPDC1-204ENST00000620992 SYCE3A1L190 88 aa9.85□□□□□ -0.83
PTPDC1-204ENST00000620992 LTKP29376 864 aa9.85□□□□□ -0.83
PTPDC1-204ENST00000620992 PRIM1P49642 420 aaKnown RBP9.85□□□□□ -0.83
PTPDC1-204ENST00000620992 RGS12O14924 1447 aa9.85□□□□□ -0.83
PTPDC1-204ENST00000620992 A0A0U1RQG5 324 aaPredicted RBP9.85□□□□□ -0.83
PTPDC1-204ENST00000620992 SLC39A6Q13433 755 aa9.85□□□□□ -0.83
PTPDC1-204ENST00000620992 TAF7Q15545 349 aaPredicted RBP9.85□□□□□ -0.83
PTPDC1-204ENST00000620992 LRP2BPQ9P2M1 347 aa9.85□□□□□ -0.83
PTPDC1-204ENST00000620992 CWC27Q6UX04 472 aaKnown RBP9.84□□□□□ -0.83
PTPDC1-204ENST00000620992 SDF4Q9BRK5 362 aa9.84□□□□□ -0.83
PTPDC1-204ENST00000620992 LARP6Q9BRS8 491 aaKnown RBP9.84□□□□□ -0.83
PTPDC1-204ENST00000620992 ESYT1Q9BSJ8 1104 aa9.84□□□□□ -0.83
PTPDC1-204ENST00000620992 GNAT3A8MTJ3 354 aa9.84□□□□□ -0.83
PTPDC1-204ENST00000620992 SNRKQ9NRH2 765 aa9.84□□□□□ -0.83
PTPDC1-204ENST00000620992 PALD1Q9ULE6 856 aa9.84□□□□□ -0.83
PTPDC1-204ENST00000620992 IQSEC3Q9UPP2 1182 aaPredicted RBP9.84□□□□□ -0.83
PTPDC1-204ENST00000620992 KNDC1Q76NI1 1749 aa9.84□□□□□ -0.83
PTPDC1-204ENST00000620992 PLEKHG3A1L390 1219 aa9.84□□□□□ -0.83
PTPDC1-204ENST00000620992 SAFBQ15424 915 aaKnown RBP eCLIP9.84□□□□□ -0.83
PTPDC1-204ENST00000620992 CCDC158Q5M9N0 1113 aa9.84□□□□□ -0.83
PTPDC1-204ENST00000620992 WDR78Q5VTH9 848 aa9.84□□□□□ -0.83
PTPDC1-204ENST00000620992 EXOC5O00471 708 aa9.83□□□□□ -0.84
PTPDC1-204ENST00000620992 FIBPO43427 364 aa9.83□□□□□ -0.84
PTPDC1-204ENST00000620992 TPM3P06753 285 aa9.83□□□□□ -0.84
PTPDC1-204ENST00000620992 RBSNQ9H1K0 784 aa9.83□□□□□ -0.84
PTPDC1-204ENST00000620992 ZHX3Q9H4I2 956 aa9.83□□□□□ -0.84
PTPDC1-204ENST00000620992 GDPD2Q9HCC8 539 aa9.83□□□□□ -0.84
PTPDC1-204ENST00000620992 HSP90AA2PQ14568 343 aaPredicted RBP9.83□□□□□ -0.84
PTPDC1-204ENST00000620992 SIRT1Q96EB6 747 aa9.83□□□□□ -0.84
PTPDC1-204ENST00000620992 MYD88Q99836 296 aa9.83□□□□□ -0.84
PTPDC1-204ENST00000620992 TMEM2Q9UHN6 1383 aa9.83□□□□□ -0.84
PTPDC1-204ENST00000620992 ZPR1O75312 459 aa9.83□□□□□ -0.84
PTPDC1-204ENST00000620992 ZSCAN30Q86W11 494 aa9.83□□□□□ -0.84
PTPDC1-204ENST00000620992 GPT2Q8TD30 523 aa9.83□□□□□ -0.84
PTPDC1-204ENST00000620992 USP6P35125 1406 aa9.83□□□□□ -0.84
PTPDC1-204ENST00000620992 FLT4P35916 1363 aa9.83□□□□□ -0.84
PTPDC1-204ENST00000620992 TTLL5Q6EMB2 1281 aa9.83□□□□□ -0.84
PTPDC1-204ENST00000620992 CNTROBQ8N137 903 aa9.83□□□□□ -0.84
PTPDC1-204ENST00000620992 BOLA2Q9H3K6 86 aa9.83□□□□□ -0.84
PTPDC1-204ENST00000620992 ZDHHC9Q9Y397 364 aa9.83□□□□□ -0.84
PTPDC1-204ENST00000620992 ATP8B2P98198 1209 aa9.82□□□□□ -0.84
PTPDC1-204ENST00000620992 CCDC8Q9H0W5 538 aaPredicted RBP9.82□□□□□ -0.84
PTPDC1-204ENST00000620992 CRB1P82279 1406 aa9.82□□□□□ -0.84
PTPDC1-204ENST00000620992 STARD3NLO95772 234 aa9.82□□□□□ -0.84
PTPDC1-204ENST00000620992 CHMLP26374 656 aa9.82□□□□□ -0.84
PTPDC1-204ENST00000620992 CLEC17AQ6ZS10 378 aa9.82□□□□□ -0.84
PTPDC1-204ENST00000620992 UNC5CLQ8IV45 518 aa9.82□□□□□ -0.84
PTPDC1-204ENST00000620992 ATP6V1DQ9Y5K8 247 aa9.82□□□□□ -0.84
PTPDC1-204ENST00000620992 MINDY4BA8MYZ0 360 aa9.82□□□□□ -0.84
PTPDC1-204ENST00000620992 C6orf229H3BNL8 230 aa9.82□□□□□ -0.84
PTPDC1-204ENST00000620992 CYP2E1P05181 493 aaPredicted RBP9.82□□□□□ -0.84
PTPDC1-204ENST00000620992 CSPP1Q1MSJ5 1256 aa9.82□□□□□ -0.84
PTPDC1-204ENST00000620992 TSR1Q2NL82 804 aaKnown RBP9.82□□□□□ -0.84
PTPDC1-204ENST00000620992 METTL24Q5JXM2 366 aa9.82□□□□□ -0.84
PTPDC1-204ENST00000620992 PHAXQ9H814 394 aaKnown RBP9.82□□□□□ -0.84
PTPDC1-204ENST00000620992 ANKIB1Q9P2G1 1089 aa9.82□□□□□ -0.84
PTPDC1-204ENST00000620992 TRMT112Q9UI30 125 aaKnown RBP9.82□□□□□ -0.84
PTPDC1-204ENST00000620992 RIMBP3CA6NJZ7 1639 aa9.82□□□□□ -0.84
PTPDC1-204ENST00000620992 RIMBP3BA6NNM3 1639 aa9.82□□□□□ -0.84
PTPDC1-204ENST00000620992 RIMBP3Q9UFD9 1639 aa9.82□□□□□ -0.84
PTPDC1-204ENST00000620992 ZNF445P59923 1031 aa9.81□□□□□ -0.84
PTPDC1-204ENST00000620992 TMEM132AQ24JP5 1023 aa9.81□□□□□ -0.84
PTPDC1-204ENST00000620992 KCNH5Q8NCM2 988 aa9.81□□□□□ -0.84
PTPDC1-204ENST00000620992 TMEM63CQ9P1W3 806 aa9.81□□□□□ -0.84
PTPDC1-204ENST00000620992 NSFL1CQ9UNZ2 370 aaKnown RBP9.81□□□□□ -0.84
PTPDC1-204ENST00000620992 MCM2P49736 904 aa9.81□□□□□ -0.84
PTPDC1-204ENST00000620992 LRRC59Q96AG4 307 aaKnown RBP9.81□□□□□ -0.84
PTPDC1-204ENST00000620992 SPATA31D1Q6ZQQ2 1576 aa9.81□□□□□ -0.84
PTPDC1-204ENST00000620992 USP5P45974 858 aa9.81□□□□□ -0.84
PTPDC1-204ENST00000620992 DDX17Q92841 729 aaKnown RBP9.81□□□□□ -0.84
PTPDC1-204ENST00000620992 OSBPL3Q9H4L5 887 aa9.81□□□□□ -0.84
PTPDC1-204ENST00000620992 PPP1R42Q7Z4L9 355 aa9.81□□□□□ -0.84
PTPDC1-204ENST00000620992 OVOS2A0A0J9YW53 1432 aa9.8□□□□□ -0.84
PTPDC1-204ENST00000620992 OVOS2Q6IE36 1432 aa9.8□□□□□ -0.84
PTPDC1-204ENST00000620992 ARHGEF10O15013 1369 aa9.8□□□□□ -0.84
PTPDC1-204ENST00000620992 TDO2P48775 406 aa9.8□□□□□ -0.84
PTPDC1-204ENST00000620992 ZFYVE27Q5T4F4 411 aa9.8□□□□□ -0.84
PTPDC1-204ENST00000620992 ZNF622Q969S3 477 aaKnown RBP eCLIP9.8□□□□□ -0.84
PTPDC1-204ENST00000620992 SBNO1A3KN83 1393 aa9.8□□□□□ -0.84
PTPDC1-204ENST00000620992 SSBP05455 408 aaKnown RBP eCLIP9.8□□□□□ -0.84
PTPDC1-204ENST00000620992 VSIG10Q8N0Z9 540 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms