RNA–Protein interactions for RNA: ENST00000620962.1

ITM2C-210, Transcript of integral membrane protein 2C, humanhuman

BASIC

Gene ITM2C, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-210ENST00000620962 RTF1Q92541 710 aaKnown RBP26.82■■□□□ 1.88
ITM2C-210ENST00000620962 CNKSR1Q969H4 720 aa26.82■■□□□ 1.88
ITM2C-210ENST00000620962 SNRPA1P09661 255 aaKnown RBP26.81■■□□□ 1.88
ITM2C-210ENST00000620962 U2AF1L5P0DN76 240 aaPredicted RBP26.81■■□□□ 1.88
ITM2C-210ENST00000620962 PPP2R1AP30153 589 aa26.81■■□□□ 1.88
ITM2C-210ENST00000620962 U2AF1Q01081 240 aaKnown RBP eCLIP26.81■■□□□ 1.88
ITM2C-210ENST00000620962 DPY19L2Q6NUT2 758 aa26.81■■□□□ 1.88
ITM2C-210ENST00000620962 NPHP1O15259 732 aa26.8■■□□□ 1.88
ITM2C-210ENST00000620962 HTATSF1O43719 755 aaKnown RBP26.8■■□□□ 1.88
ITM2C-210ENST00000620962 RGL2O15211 777 aa26.79■■□□□ 1.88
ITM2C-210ENST00000620962 SRGNP10124 158 aa26.79■■□□□ 1.88
ITM2C-210ENST00000620962 ERFEQ4G0M1 354 aa26.79■■□□□ 1.88
ITM2C-210ENST00000620962 MASTLQ96GX5 879 aa26.79■■□□□ 1.88
ITM2C-210ENST00000620962 PRAMEF22A3QJZ6 481 aa26.78■■□□□ 1.88
ITM2C-210ENST00000620962 POTECB2RU33 542 aa26.78■■□□□ 1.88
ITM2C-210ENST00000620962 SOGA3Q5TF21 947 aa26.78■■□□□ 1.88
ITM2C-210ENST00000620962 MCM10Q7L590 875 aa26.78■■□□□ 1.88
ITM2C-210ENST00000620962 TAOK3Q9H2K8 898 aa26.78■■□□□ 1.88
ITM2C-210ENST00000620962 ZNF219Q9P2Y4 722 aaPredicted RBP26.78■■□□□ 1.88
ITM2C-210ENST00000620962 ZNF652Q9Y2D9 606 aa26.78■■□□□ 1.88
ITM2C-210ENST00000620962 PRPF40BQ6NWY9 871 aaKnown RBP26.77■■□□□ 1.88
ITM2C-210ENST00000620962 PIP4K2AP48426 406 aaPredicted RBP26.76■■□□□ 1.87
ITM2C-210ENST00000620962 NBPF5PQ86XG9 351 aaPredicted RBP26.75■■□□□ 1.87
ITM2C-210ENST00000620962 LAMB4A4D0S4 1761 aa26.74■■□□□ 1.87
ITM2C-210ENST00000620962 KLRG2A4D1S0 409 aaPredicted RBP26.72■■□□□ 1.87
ITM2C-210ENST00000620962 NBPF26B4DH59 902 aa26.72■■□□□ 1.87
ITM2C-210ENST00000620962 DCTN1Q14203 1278 aa26.72■■□□□ 1.87
ITM2C-210ENST00000620962 TAF7Q15545 349 aaPredicted RBP26.72■■□□□ 1.87
ITM2C-210ENST00000620962 NBPF10Q6P3W6 841 aaKnown RBP26.72■■□□□ 1.87
ITM2C-210ENST00000620962 NBPF15Q8N660 670 aa26.72■■□□□ 1.87
ITM2C-210ENST00000620962 C7orf43Q8WVR3 580 aa26.71■■□□□ 1.87
ITM2C-210ENST00000620962 DLG5Q8TDM6 1919 aa26.71■■□□□ 1.87
ITM2C-210ENST00000620962 NPR1P16066 1061 aa26.7■■□□□ 1.86
ITM2C-210ENST00000620962 TPTE2Q6XPS3 522 aa26.7■■□□□ 1.86
ITM2C-210ENST00000620962 NIP7Q9Y221 180 aaKnown RBP eCLIP26.69■■□□□ 1.86
ITM2C-210ENST00000620962 KDM3BQ7LBC6 1761 aa26.69■■□□□ 1.86
ITM2C-210ENST00000620962 CCDC93Q567U6 631 aa26.68■■□□□ 1.86
ITM2C-210ENST00000620962 SCN4AP35499 1836 aa26.67■■□□□ 1.86
ITM2C-210ENST00000620962 DDNO94850 711 aaPredicted RBP26.66■■□□□ 1.86
ITM2C-210ENST00000620962 PNISRQ8TF01 805 aaKnown RBP26.65■■□□□ 1.86
ITM2C-210ENST00000620962 NEFMP07197 916 aa26.64■■□□□ 1.86
ITM2C-210ENST00000620962 COL13A1Q5TAT6 717 aaPredicted RBP26.64■■□□□ 1.86
ITM2C-210ENST00000620962 CHADLQ6NUI6 762 aa26.64■■□□□ 1.86
ITM2C-210ENST00000620962 NUP98P52948 1817 aa26.63■■□□□ 1.85
ITM2C-210ENST00000620962 FKBP4Q02790 459 aaKnown RBP eCLIP26.63■■□□□ 1.85
ITM2C-210ENST00000620962 HLFQ16534 295 aa26.63■■□□□ 1.85
ITM2C-210ENST00000620962 L3MBTL3Q96JM7 780 aaPredicted RBP26.63■■□□□ 1.85
ITM2C-210ENST00000620962 IQCA1LA6NCM1 817 aa26.62■■□□□ 1.85
ITM2C-210ENST00000620962 MIS18AQ9NYP9 233 aa26.62■■□□□ 1.85
ITM2C-210ENST00000620962 PCNTO95613 3336 aa26.62■■□□□ 1.85
ITM2C-210ENST00000620962 ERVV-1B6SEH8 477 aa26.61■■□□□ 1.85
ITM2C-210ENST00000620962 ALDH1B1P30837 517 aa26.61■■□□□ 1.85
ITM2C-210ENST00000620962 RTKN2Q8IZC4 609 aa26.61■■□□□ 1.85
ITM2C-210ENST00000620962 PLEKHF1Q96S99 279 aa26.6■■□□□ 1.85
ITM2C-210ENST00000620962 CREBZFQ9NS37 354 aa26.6■■□□□ 1.85
ITM2C-210ENST00000620962 FAM177BA6PVY3 158 aa26.59■■□□□ 1.85
ITM2C-210ENST00000620962 POTEIP0CG38 1075 aa26.59■■□□□ 1.85
ITM2C-210ENST00000620962 POTEJP0CG39 1038 aa26.59■■□□□ 1.85
ITM2C-210ENST00000620962 NYXQ9GZU5 481 aa26.59■■□□□ 1.85
ITM2C-210ENST00000620962 HSPA1AP0DMV8 641 aaKnown RBP26.58■■□□□ 1.85
ITM2C-210ENST00000620962 HSPA1BP0DMV9 641 aaKnown RBP26.58■■□□□ 1.85
ITM2C-210ENST00000620962 GTF2E1P29083 439 aaPredicted RBP26.58■■□□□ 1.85
ITM2C-210ENST00000620962 EIF4A1P60842 406 aaKnown RBP26.58■■□□□ 1.85
ITM2C-210ENST00000620962 NFE2L2Q16236 605 aa26.57■■□□□ 1.84
ITM2C-210ENST00000620962 CRY2Q49AN0 593 aa26.57■■□□□ 1.84
ITM2C-210ENST00000620962 LDHDQ86WU2 507 aa26.57■■□□□ 1.84
ITM2C-210ENST00000620962 TAF1DQ9H5J8 278 aaPredicted RBP26.57■■□□□ 1.84
ITM2C-210ENST00000620962 ZNF277Q9NRM2 450 aaPredicted RBP26.57■■□□□ 1.84
ITM2C-210ENST00000620962 MAP3K15Q6ZN16 1313 aa26.57■■□□□ 1.84
ITM2C-210ENST00000620962 RIC1Q4ADV7 1423 aa26.56■■□□□ 1.84
ITM2C-210ENST00000620962 OLFM4Q6UX06 510 aa26.56■■□□□ 1.84
ITM2C-210ENST00000620962 IBTKQ9P2D0 1353 aaPredicted RBP26.56■■□□□ 1.84
ITM2C-210ENST00000620962 SNED1Q8TER0 1413 aa26.56■■□□□ 1.84
ITM2C-210ENST00000620962 PNNQ9H307 717 aaKnown RBP26.55■■□□□ 1.84
ITM2C-210ENST00000620962 ABCC12Q96J65 1359 aa26.55■■□□□ 1.84
ITM2C-210ENST00000620962 IARSP41252 1262 aaKnown RBP26.54■■□□□ 1.84
ITM2C-210ENST00000620962 KIF6Q6ZMV9 814 aa26.54■■□□□ 1.84
ITM2C-210ENST00000620962 PASKQ96RG2 1323 aa26.54■■□□□ 1.84
ITM2C-210ENST00000620962 ZNF541Q9H0D2 1346 aa26.54■■□□□ 1.84
ITM2C-210ENST00000620962 FZD9O00144 591 aa26.53■■□□□ 1.84
ITM2C-210ENST00000620962 NGEFQ8N5V2 710 aa26.53■■□□□ 1.84
ITM2C-210ENST00000620962 PSMD1Q99460 953 aa26.53■■□□□ 1.84
ITM2C-210ENST00000620962 RRP7AQ9Y3A4 280 aaKnown RBP26.53■■□□□ 1.84
ITM2C-210ENST00000620962 ADAMTSL1Q8N6G6 1762 aa26.53■■□□□ 1.84
ITM2C-210ENST00000620962 ERBB4Q15303 1308 aa26.52■■□□□ 1.84
ITM2C-210ENST00000620962 CC2D2BQ6DHV5 1058 aa26.52■■□□□ 1.84
ITM2C-210ENST00000620962 TTLL7Q6ZT98 887 aa26.52■■□□□ 1.84
ITM2C-210ENST00000620962 NUTM1Q86Y26 1132 aa26.52■■□□□ 1.84
ITM2C-210ENST00000620962 TNS4Q8IZW8 715 aa26.52■■□□□ 1.84
ITM2C-210ENST00000620962 SYNE4Q8N205 404 aa26.52■■□□□ 1.84
ITM2C-210ENST00000620962 HACL1Q9UJ83 578 aa26.52■■□□□ 1.84
ITM2C-210ENST00000620962 THUMPD2Q9BTF0 503 aaKnown RBP26.51■■□□□ 1.83
ITM2C-210ENST00000620962 UBN2Q6ZU65 1347 aa26.5■■□□□ 1.83
ITM2C-210ENST00000620962 MAPK8IP3Q9UPT6 1336 aa26.5■■□□□ 1.83
ITM2C-210ENST00000620962 HOXA10P31260 410 aaPredicted RBP26.5■■□□□ 1.83
ITM2C-210ENST00000620962 CNTNAP1P78357 1384 aa26.49■■□□□ 1.83
ITM2C-210ENST00000620962 GRIPAP1Q4V328 841 aa26.49■■□□□ 1.83
ITM2C-210ENST00000620962 MKRN1Q9UHC7 482 aaKnown RBP26.49■■□□□ 1.83
ITM2C-210ENST00000620962 MYL6BP14649 208 aa26.48■■□□□ 1.83
ITM2C-210ENST00000620962 EPHX2P34913 555 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms