RNA–Protein interactions for RNA: ENST00000619587.1

LHX3-203, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,698 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-203ENST00000619587 ME3Q16798 604 aa20.53■□□□□ 0.88
LHX3-203ENST00000619587 MTHFSDQ2M296 383 aaKnown RBP20.53■□□□□ 0.88
LHX3-203ENST00000619587 CDC37L1Q7L3B6 337 aa20.53■□□□□ 0.88
LHX3-203ENST00000619587 CACTINQ8WUQ7 758 aaKnown RBP20.53■□□□□ 0.88
LHX3-203ENST00000619587 ZNF592Q92610 1267 aa20.53■□□□□ 0.88
LHX3-203ENST00000619587 DIP2CQ9Y2E4 1556 aa20.52■□□□□ 0.88
LHX3-203ENST00000619587 MON2Q7Z3U7 1717 aa20.52■□□□□ 0.88
LHX3-203ENST00000619587 COL9A3Q14050 684 aaPredicted RBP20.52■□□□□ 0.88
LHX3-203ENST00000619587 TPD52L1Q16890 204 aaPredicted RBP20.52■□□□□ 0.88
LHX3-203ENST00000619587 CCDC144BQ3MJ40 725 aa20.52■□□□□ 0.88
LHX3-203ENST00000619587 PRPF40BQ6NWY9 871 aaKnown RBP20.52■□□□□ 0.88
LHX3-203ENST00000619587 PLA2G4DQ86XP0 818 aa20.52■□□□□ 0.88
LHX3-203ENST00000619587 CCDC144CPQ8IYA2 1237 aa20.52■□□□□ 0.88
LHX3-203ENST00000619587 KIF18AQ8NI77 898 aa20.51■□□□□ 0.87
LHX3-203ENST00000619587 RHPN1Q8TCX5 695 aa20.51■□□□□ 0.87
LHX3-203ENST00000619587 TNMDQ9H2S6 317 aa20.51■□□□□ 0.87
LHX3-203ENST00000619587 UBTFL1P0CB47 393 aaPredicted RBP20.51■□□□□ 0.87
LHX3-203ENST00000619587 PPP1R42Q7Z4L9 355 aa20.51■□□□□ 0.87
LHX3-203ENST00000619587 KLHL34Q8N239 644 aa20.51■□□□□ 0.87
LHX3-203ENST00000619587 SSH3Q8TE77 659 aa20.51■□□□□ 0.87
LHX3-203ENST00000619587 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.51■□□□□ 0.87
LHX3-203ENST00000619587 V9GYY5 206 aaPredicted RBP20.51■□□□□ 0.87
LHX3-203ENST00000619587 RIMBP3CA6NJZ7 1639 aa20.51■□□□□ 0.87
LHX3-203ENST00000619587 RIMBP3BA6NNM3 1639 aa20.51■□□□□ 0.87
LHX3-203ENST00000619587 RIMBP3Q9UFD9 1639 aa20.51■□□□□ 0.87
LHX3-203ENST00000619587 C3P01024 1663 aa20.51■□□□□ 0.87
LHX3-203ENST00000619587 KRT85P78386 507 aa20.5■□□□□ 0.87
LHX3-203ENST00000619587 CNTROBQ8N137 903 aa20.5■□□□□ 0.87
LHX3-203ENST00000619587 TFIP11Q9UBB9 837 aaKnown RBP20.5■□□□□ 0.87
LHX3-203ENST00000619587 MORC2Q9Y6X9 1032 aaPredicted RBP20.5■□□□□ 0.87
LHX3-203ENST00000619587 MAP3K19Q56UN5 1328 aa20.5■□□□□ 0.87
LHX3-203ENST00000619587 LARP1BQ659C4 914 aaKnown RBP20.5■□□□□ 0.87
LHX3-203ENST00000619587 TXNDC2Q86VQ3 553 aa20.5■□□□□ 0.87
LHX3-203ENST00000619587 CCDC61Q9Y6R9 512 aa20.5■□□□□ 0.87
LHX3-203ENST00000619587 ARHGEF10O15013 1369 aa20.49■□□□□ 0.87
LHX3-203ENST00000619587 USP27XA6NNY8 438 aa20.49■□□□□ 0.87
LHX3-203ENST00000619587 CDK11BP21127 795 aaKnown RBP20.49■□□□□ 0.87
LHX3-203ENST00000619587 ARID5BQ14865 1188 aa20.49■□□□□ 0.87
LHX3-203ENST00000619587 VPS53Q5VIR6 699 aa20.49■□□□□ 0.87
LHX3-203ENST00000619587 VGLL3A8MV65 326 aa20.49■□□□□ 0.87
LHX3-203ENST00000619587 DNAJC25Q9H1X3 360 aa20.49■□□□□ 0.87
LHX3-203ENST00000619587 CLIP2Q9UDT6 1046 aa20.49■□□□□ 0.87
LHX3-203ENST00000619587 PAXBP1Q9Y5B6 917 aa20.49■□□□□ 0.87
LHX3-203ENST00000619587 TPCN1Q9ULQ1 816 aa20.48■□□□□ 0.87
LHX3-203ENST00000619587 PEAK1Q9H792 1746 aa20.48■□□□□ 0.87
LHX3-203ENST00000619587 KMT5BQ4FZB7 885 aa20.48■□□□□ 0.87
LHX3-203ENST00000619587 CYP46A1Q9Y6A2 500 aa20.48■□□□□ 0.87
LHX3-203ENST00000619587 CEP135Q66GS9 1140 aa20.47■□□□□ 0.87
LHX3-203ENST00000619587 TDRD7Q8NHU6 1098 aaKnown RBP20.47■□□□□ 0.87
LHX3-203ENST00000619587 ZSWIM6Q9HCJ5 1215 aa20.47■□□□□ 0.87
LHX3-203ENST00000619587 SH2B1Q9NRF2 756 aaPredicted RBP20.47■□□□□ 0.87
LHX3-203ENST00000619587 FAM208AQ9UK61 1670 aaKnown RBP20.47■□□□□ 0.87
LHX3-203ENST00000619587 CCDC30Q5VVM6 783 aa20.47■□□□□ 0.87
LHX3-203ENST00000619587 ZSCAN31Q96LW9 406 aaPredicted RBP20.47■□□□□ 0.87
LHX3-203ENST00000619587 ZNF215Q9UL58 517 aaPredicted RBP20.47■□□□□ 0.87
LHX3-203ENST00000619587 TERF2Q15554 542 aa20.46■□□□□ 0.87
LHX3-203ENST00000619587 TTC21AQ8NDW8 1320 aa20.46■□□□□ 0.87
LHX3-203ENST00000619587 SRGAP3O43295 1099 aa20.46■□□□□ 0.87
LHX3-203ENST00000619587 ZNF165P49910 485 aa20.46■□□□□ 0.87
LHX3-203ENST00000619587 ELP1O95163 1332 aa20.46■□□□□ 0.87
LHX3-203ENST00000619587 PRR36Q9H6K5 1346 aa20.46■□□□□ 0.87
LHX3-203ENST00000619587 RGPD1P0DJD0 1748 aa20.45■□□□□ 0.86
LHX3-203ENST00000619587 RAB11FIP3O75154 756 aa20.45■□□□□ 0.86
LHX3-203ENST00000619587 TCEANC2Q96MN5 208 aa20.45■□□□□ 0.86
LHX3-203ENST00000619587 AKAP12Q02952 1782 aa20.45■□□□□ 0.86
LHX3-203ENST00000619587 CCDC66A2RUB6 948 aa20.45■□□□□ 0.86
LHX3-203ENST00000619587 GOLGA6L4A6NEF3 574 aa20.45■□□□□ 0.86
LHX3-203ENST00000619587 NR1I2O75469 434 aa20.45■□□□□ 0.86
LHX3-203ENST00000619587 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.45■□□□□ 0.86
LHX3-203ENST00000619587 SETD1AO15047 1707 aaKnown RBP20.44■□□□□ 0.86
LHX3-203ENST00000619587 KCNJ4P48050 445 aa20.44■□□□□ 0.86
LHX3-203ENST00000619587 POLA2Q14181 598 aa20.44■□□□□ 0.86
LHX3-203ENST00000619587 IPO4Q8TEX9 1081 aaKnown RBP20.44■□□□□ 0.86
LHX3-203ENST00000619587 SPATA32Q96LK8 384 aa20.44■□□□□ 0.86
LHX3-203ENST00000619587 CLSTN2Q9H4D0 955 aa20.44■□□□□ 0.86
LHX3-203ENST00000619587 ITSN1Q15811 1721 aa20.44■□□□□ 0.86
LHX3-203ENST00000619587 KIF1BPQ96EK5 621 aa20.44■□□□□ 0.86
LHX3-203ENST00000619587 PHAXQ9H814 394 aaKnown RBP20.44■□□□□ 0.86
LHX3-203ENST00000619587 ST7Q9NRC1 585 aa20.44■□□□□ 0.86
LHX3-203ENST00000619587 IRX5P78411 483 aaPredicted RBP20.43■□□□□ 0.86
LHX3-203ENST00000619587 KRT222Q8N1A0 295 aa20.43■□□□□ 0.86
LHX3-203ENST00000619587 RBM43Q6ZSC3 357 aaKnown RBP20.43■□□□□ 0.86
LHX3-203ENST00000619587 LEO1Q8WVC0 666 aaPredicted RBP20.43■□□□□ 0.86
LHX3-203ENST00000619587 ZNF397Q8NF99 534 aaPredicted RBP20.42■□□□□ 0.86
LHX3-203ENST00000619587 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.42■□□□□ 0.86
LHX3-203ENST00000619587 FBXO38Q6PIJ6 1188 aa20.42■□□□□ 0.86
LHX3-203ENST00000619587 TTC21BQ7Z4L5 1316 aa20.42■□□□□ 0.86
LHX3-203ENST00000619587 PGBD1Q96JS3 809 aa20.42■□□□□ 0.86
LHX3-203ENST00000619587 TM6SF1Q9BZW5 370 aa20.42■□□□□ 0.86
LHX3-203ENST00000619587 DDX19AQ9NUU7 478 aaKnown RBP20.42■□□□□ 0.86
LHX3-203ENST00000619587 NBPF7P0C2Y1 421 aaPredicted RBP20.41■□□□□ 0.86
LHX3-203ENST00000619587 ELF2Q15723 593 aa20.41■□□□□ 0.86
LHX3-203ENST00000619587 LARP1Q6PKG0 1096 aaKnown RBP20.41■□□□□ 0.86
LHX3-203ENST00000619587 LRRC8AQ8IWT6 810 aa20.41■□□□□ 0.86
LHX3-203ENST00000619587 METP08581 1390 aa20.41■□□□□ 0.86
LHX3-203ENST00000619587 NPHP3Q7Z494 1330 aa20.41■□□□□ 0.86
LHX3-203ENST00000619587 NUTM2FA1L443 756 aa20.41■□□□□ 0.86
LHX3-203ENST00000619587 CRYBG1Q9Y4K1 1723 aa20.41■□□□□ 0.86
LHX3-203ENST00000619587 NECTIN1Q15223 517 aa20.4■□□□□ 0.86
LHX3-203ENST00000619587 TRMT1Q9NXH9 659 aaKnown RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms