RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 CEP63Q96MT8 703 aa5.04□□□□□ -1.6
UBE2D3-233ENST00000618836 EPAS1Q99814 870 aa5.04□□□□□ -1.6
UBE2D3-233ENST00000618836 NALCNQ8IZF0 1738 aa5.04□□□□□ -1.6
UBE2D3-233ENST00000618836 NAT1P18440 290 aa5.04□□□□□ -1.6
UBE2D3-233ENST00000618836 MYCBPQ99417 103 aaPredicted RBP5.04□□□□□ -1.6
UBE2D3-233ENST00000618836 CEP83Q9Y592 693 aa5.04□□□□□ -1.6
UBE2D3-233ENST00000618836 PXDNLA1KZ92 1463 aa5.04□□□□□ -1.6
UBE2D3-233ENST00000618836 POTEFA5A3E0 1075 aa5.03□□□□□ -1.6
UBE2D3-233ENST00000618836 RSPH1Q8WYR4 309 aa5.03□□□□□ -1.6
UBE2D3-233ENST00000618836 CCDC94Q9BW85 323 aaPredicted RBP5.03□□□□□ -1.6
UBE2D3-233ENST00000618836 WWC3Q9ULE0 1092 aa5.03□□□□□ -1.6
UBE2D3-233ENST00000618836 CTDP1Q9Y5B0 961 aaPredicted RBP5.03□□□□□ -1.6
UBE2D3-233ENST00000618836 CCDC189A1A4V9 331 aa5.03□□□□□ -1.6
UBE2D3-233ENST00000618836 ZNF16P17020 682 aaPredicted RBP5.03□□□□□ -1.6
UBE2D3-233ENST00000618836 IGBP1P78318 339 aa5.03□□□□□ -1.6
UBE2D3-233ENST00000618836 PIP4K2BP78356 416 aa5.03□□□□□ -1.6
UBE2D3-233ENST00000618836 TTC30BQ8N4P2 665 aa5.03□□□□□ -1.6
UBE2D3-233ENST00000618836 SVIPQ8NHG7 77 aa5.03□□□□□ -1.6
UBE2D3-233ENST00000618836 ZNF512BQ96KM6 892 aaPredicted RBP5.03□□□□□ -1.6
UBE2D3-233ENST00000618836 PCGF6Q9BYE7 350 aa5.03□□□□□ -1.6
UBE2D3-233ENST00000618836 RETREG1Q9H6L5 497 aa5.03□□□□□ -1.6
UBE2D3-233ENST00000618836 COLQQ9Y215 455 aaPredicted RBP5.03□□□□□ -1.6
UBE2D3-233ENST00000618836 USTQ9Y2C2 406 aa5.03□□□□□ -1.6
UBE2D3-233ENST00000618836 NCOA2Q15596 1464 aa5.03□□□□□ -1.6
UBE2D3-233ENST00000618836 PEAK1Q9H792 1746 aa5.03□□□□□ -1.6
UBE2D3-233ENST00000618836 CARNS1A5YM72 827 aa5.03□□□□□ -1.6
UBE2D3-233ENST00000618836 KIF3CO14782 793 aa5.03□□□□□ -1.6
UBE2D3-233ENST00000618836 NEFHP12036 1026 aa5.03□□□□□ -1.6
UBE2D3-233ENST00000618836 ATN1P54259 1190 aaPredicted RBP5.03□□□□□ -1.6
UBE2D3-233ENST00000618836 LMOD3Q0VAK6 560 aa5.03□□□□□ -1.6
UBE2D3-233ENST00000618836 NAALADL2Q58DX5 795 aa5.03□□□□□ -1.6
UBE2D3-233ENST00000618836 KRI1Q8N9T8 703 aaKnown RBP5.03□□□□□ -1.6
UBE2D3-233ENST00000618836 IFT122Q9HBG6 1241 aa5.03□□□□□ -1.6
UBE2D3-233ENST00000618836 SUN2Q9UH99 717 aa5.03□□□□□ -1.6
UBE2D3-233ENST00000618836 EFCAB2Q5VUJ9 269 aa5.02□□□□□ -1.61
UBE2D3-233ENST00000618836 SLC39A13Q96H72 371 aa5.02□□□□□ -1.61
UBE2D3-233ENST00000618836 MAP7D2Q96T17 732 aa5.02□□□□□ -1.61
UBE2D3-233ENST00000618836 XRN1Q8IZH2 1706 aaKnown RBP5.02□□□□□ -1.61
UBE2D3-233ENST00000618836 hCG_2014768A0A024R1R8 64 aa5.02□□□□□ -1.61
UBE2D3-233ENST00000618836 KLHL33A6NCF5 533 aa5.02□□□□□ -1.61
UBE2D3-233ENST00000618836 VAMP1P23763 118 aa5.02□□□□□ -1.61
UBE2D3-233ENST00000618836 CCDC146Q8IYE0 955 aa5.02□□□□□ -1.61
UBE2D3-233ENST00000618836 OGFOD1Q8N543 542 aa5.02□□□□□ -1.61
UBE2D3-233ENST00000618836 PAIP2Q9BPZ3 127 aaKnown RBP5.02□□□□□ -1.61
UBE2D3-233ENST00000618836 AKAP2Q9Y2D5 859 aa5.02□□□□□ -1.61
UBE2D3-233ENST00000618836 PRAG1Q86YV5 1406 aa5.02□□□□□ -1.61
UBE2D3-233ENST00000618836 RGS20O76081 388 aa5.02□□□□□ -1.61
UBE2D3-233ENST00000618836 MAN1A1P33908 653 aa5.02□□□□□ -1.61
UBE2D3-233ENST00000618836 TBX4P57082 545 aa5.02□□□□□ -1.61
UBE2D3-233ENST00000618836 MUC3BQ9H195 1237 aa5.02□□□□□ -1.61
UBE2D3-233ENST00000618836 MYOM2P54296 1465 aa5.01□□□□□ -1.61
UBE2D3-233ENST00000618836 TNRC6CQ9HCJ0 1690 aaKnown RBP5.01□□□□□ -1.61
UBE2D3-233ENST00000618836 C3orf80F5H4A9 247 aa5.01□□□□□ -1.61
UBE2D3-233ENST00000618836 ATG7O95352 703 aa5.01□□□□□ -1.61
UBE2D3-233ENST00000618836 IFT88Q13099 833 aa5.01□□□□□ -1.61
UBE2D3-233ENST00000618836 NOM1Q5C9Z4 860 aaKnown RBP5.01□□□□□ -1.61
UBE2D3-233ENST00000618836 LARP1BQ659C4 914 aaKnown RBP5.01□□□□□ -1.61
UBE2D3-233ENST00000618836 DZIP3Q86Y13 1208 aaKnown RBP5.01□□□□□ -1.61
UBE2D3-233ENST00000618836 AGAP3Q96P47 875 aa5.01□□□□□ -1.61
UBE2D3-233ENST00000618836 PAGR1Q9BTK6 254 aa5.01□□□□□ -1.61
UBE2D3-233ENST00000618836 GOPCQ9HD26 462 aa5.01□□□□□ -1.61
UBE2D3-233ENST00000618836 NUTM2FA1L443 756 aa5.01□□□□□ -1.61
UBE2D3-233ENST00000618836 LETM1O95202 739 aaPredicted RBP5.01□□□□□ -1.61
UBE2D3-233ENST00000618836 COL6A1P12109 1028 aa5.01□□□□□ -1.61
UBE2D3-233ENST00000618836 PDE4AP27815 886 aa5.01□□□□□ -1.61
UBE2D3-233ENST00000618836 HSP90B2PQ58FF3 399 aa5.01□□□□□ -1.61
UBE2D3-233ENST00000618836 DNTTIP2Q5QJE6 756 aaKnown RBP5.01□□□□□ -1.61
UBE2D3-233ENST00000618836 COL13A1Q5TAT6 717 aaPredicted RBP5.01□□□□□ -1.61
UBE2D3-233ENST00000618836 KRT77Q7Z794 578 aa5.01□□□□□ -1.61
UBE2D3-233ENST00000618836 NPDC1Q9NQX5 325 aaPredicted RBP5.01□□□□□ -1.61
UBE2D3-233ENST00000618836 TBX22Q9Y458 520 aa5.01□□□□□ -1.61
UBE2D3-233ENST00000618836 EIF2AK4Q9P2K8 1649 aaKnown RBP5.01□□□□□ -1.61
UBE2D3-233ENST00000618836 CTAGE5O15320 804 aa5□□□□□ -1.61
UBE2D3-233ENST00000618836 FGAP02671 866 aa5□□□□□ -1.61
UBE2D3-233ENST00000618836 PLPP6Q8IY26 295 aa5□□□□□ -1.61
UBE2D3-233ENST00000618836 RPS6KC1Q96S38 1066 aa5□□□□□ -1.61
UBE2D3-233ENST00000618836 TMA7Q9Y2S6 64 aaKnown RBP5□□□□□ -1.61
UBE2D3-233ENST00000618836 SLIT2O94813 1529 aa5□□□□□ -1.61
UBE2D3-233ENST00000618836 KIF16BQ96L93 1317 aa5□□□□□ -1.61
UBE2D3-233ENST00000618836 A2MP01023 1474 aa5□□□□□ -1.61
UBE2D3-233ENST00000618836 TIMM44O43615 452 aa5□□□□□ -1.61
UBE2D3-233ENST00000618836 TBC1D12O60347 775 aa5□□□□□ -1.61
UBE2D3-233ENST00000618836 FAM163BP0C2L3 166 aa5□□□□□ -1.61
UBE2D3-233ENST00000618836 PAX7P23759 505 aa5□□□□□ -1.61
UBE2D3-233ENST00000618836 C11orf91Q3C1V1 193 aa5□□□□□ -1.61
UBE2D3-233ENST00000618836 CATIPQ7Z7H3 387 aa5□□□□□ -1.61
UBE2D3-233ENST00000618836 CCAR1Q8IX12 1150 aaKnown RBP5□□□□□ -1.61
UBE2D3-233ENST00000618836 SLX1AQ9BQ83 275 aa5□□□□□ -1.61
UBE2D3-233ENST00000618836 GTPBP4Q9BZE4 634 aaKnown RBP5□□□□□ -1.61
UBE2D3-233ENST00000618836 TRPC1P48995 793 aa5□□□□□ -1.61
UBE2D3-233ENST00000618836 NLGN1Q8N2Q7 840 aa5□□□□□ -1.61
UBE2D3-233ENST00000618836 CUEDC1Q9NWM3 386 aaPredicted RBP5□□□□□ -1.61
UBE2D3-233ENST00000618836 KLF15Q9UIH9 416 aa5□□□□□ -1.61
UBE2D3-233ENST00000618836 CCDC172P0C7W6 258 aa4.99□□□□□ -1.61
UBE2D3-233ENST00000618836 CCT2P78371 535 aaKnown RBP4.99□□□□□ -1.61
UBE2D3-233ENST00000618836 PLEKHG6Q3KR16 790 aa4.99□□□□□ -1.61
UBE2D3-233ENST00000618836 CT47A1Q5JQC4 288 aaPredicted RBP4.99□□□□□ -1.61
UBE2D3-233ENST00000618836 NPAS4Q8IUM7 802 aa4.99□□□□□ -1.61
UBE2D3-233ENST00000618836 MIGA1Q8NAN2 632 aa4.99□□□□□ -1.61
UBE2D3-233ENST00000618836 CXorf56Q9H5V9 222 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms