RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 RPAP2Q8IXW5 612 aaPredicted RBP5.34□□□□□ -1.55
SEC22B-202ENST00000618538 ZGPATQ8N5A5 531 aaKnown RBP5.34□□□□□ -1.55
SEC22B-202ENST00000618538 IL25Q9H293 177 aa5.34□□□□□ -1.55
SEC22B-202ENST00000618538 ESF1Q9H501 851 aaKnown RBP5.34□□□□□ -1.55
SEC22B-202ENST00000618538 GPHNQ9NQX3 736 aaPredicted RBP5.34□□□□□ -1.55
SEC22B-202ENST00000618538 TSPYL4Q9UJ04 414 aa5.34□□□□□ -1.55
SEC22B-202ENST00000618538 V9GY48 417 aaPredicted RBP5.34□□□□□ -1.55
SEC22B-202ENST00000618538 TTC21AQ8NDW8 1320 aa5.34□□□□□ -1.55
SEC22B-202ENST00000618538 FOSBP53539 338 aa5.33□□□□□ -1.56
SEC22B-202ENST00000618538 NUTM2GQ5VZR2 741 aa5.33□□□□□ -1.56
SEC22B-202ENST00000618538 CLEC17AQ6ZS10 378 aa5.33□□□□□ -1.56
SEC22B-202ENST00000618538 ZNF454Q8N9F8 522 aa5.33□□□□□ -1.56
SEC22B-202ENST00000618538 IL17REQ8NFR9 667 aa5.33□□□□□ -1.56
SEC22B-202ENST00000618538 GRPEL1Q9HAV7 217 aa5.33□□□□□ -1.56
SEC22B-202ENST00000618538 RABGEF1Q9UJ41 708 aa5.33□□□□□ -1.56
SEC22B-202ENST00000618538 EXOC6BQ9Y2D4 811 aa5.33□□□□□ -1.56
SEC22B-202ENST00000618538 ZDHHC9Q9Y397 364 aa5.33□□□□□ -1.56
SEC22B-202ENST00000618538 MED1Q15648 1581 aaPredicted RBP5.33□□□□□ -1.56
SEC22B-202ENST00000618538 BAG4O95429 457 aaKnown RBP5.33□□□□□ -1.56
SEC22B-202ENST00000618538 HOXC9P31274 260 aa5.33□□□□□ -1.56
SEC22B-202ENST00000618538 PDE1AP54750 535 aa5.33□□□□□ -1.56
SEC22B-202ENST00000618538 SLC4A10Q6U841 1118 aa5.33□□□□□ -1.56
SEC22B-202ENST00000618538 NECTIN2Q92692 538 aa5.33□□□□□ -1.56
SEC22B-202ENST00000618538 OSBPL3Q9H4L5 887 aa5.33□□□□□ -1.56
SEC22B-202ENST00000618538 PALD1Q9ULE6 856 aa5.33□□□□□ -1.56
SEC22B-202ENST00000618538 KCNA6P17658 529 aa5.32□□□□□ -1.56
SEC22B-202ENST00000618538 HDGFP51858 240 aaKnown RBP5.32□□□□□ -1.56
SEC22B-202ENST00000618538 FLIIQ13045 1269 aa5.32□□□□□ -1.56
SEC22B-202ENST00000618538 RABEP1Q15276 862 aa5.32□□□□□ -1.56
SEC22B-202ENST00000618538 UNC5CLQ8IV45 518 aa5.32□□□□□ -1.56
SEC22B-202ENST00000618538 USHBP1Q8N6Y0 703 aa5.32□□□□□ -1.56
SEC22B-202ENST00000618538 IBTKQ9P2D0 1353 aaPredicted RBP5.32□□□□□ -1.56
SEC22B-202ENST00000618538 LTN1O94822 1766 aa5.32□□□□□ -1.56
SEC22B-202ENST00000618538 NFAT5O94916 1531 aa5.32□□□□□ -1.56
SEC22B-202ENST00000618538 SOWAHBA6NEL2 793 aa5.32□□□□□ -1.56
SEC22B-202ENST00000618538 MRE11P49959 708 aa5.32□□□□□ -1.56
SEC22B-202ENST00000618538 OXER1Q8TDS5 423 aa5.32□□□□□ -1.56
SEC22B-202ENST00000618538 TBX22Q9Y458 520 aa5.32□□□□□ -1.56
SEC22B-202ENST00000618538 FER1L4A9Z1Z3 1794 aa5.31□□□□□ -1.56
SEC22B-202ENST00000618538 RGPD2P0DJD1 1756 aa5.31□□□□□ -1.56
SEC22B-202ENST00000618538 MAP3K5Q99683 1374 aa5.31□□□□□ -1.56
SEC22B-202ENST00000618538 LCE2BO14633 110 aa5.31□□□□□ -1.56
SEC22B-202ENST00000618538 HSP90AA1P07900 732 aaKnown RBP5.31□□□□□ -1.56
SEC22B-202ENST00000618538 CCT4P50991 539 aaKnown RBP5.31□□□□□ -1.56
SEC22B-202ENST00000618538 NGDNQ8NEJ9 315 aaKnown RBP5.31□□□□□ -1.56
SEC22B-202ENST00000618538 GBP4Q96PP9 640 aa5.31□□□□□ -1.56
SEC22B-202ENST00000618538 USP44Q9H0E7 712 aa5.31□□□□□ -1.56
SEC22B-202ENST00000618538 PHAXQ9H814 394 aaKnown RBP5.31□□□□□ -1.56
SEC22B-202ENST00000618538 LRRFIP2Q9Y608 721 aaKnown RBP5.31□□□□□ -1.56
SEC22B-202ENST00000618538 ANKARQ7Z5J8 1434 aa5.31□□□□□ -1.56
SEC22B-202ENST00000618538 KDM3BQ7LBC6 1761 aa5.31□□□□□ -1.56
SEC22B-202ENST00000618538 PRKCSHP14314 528 aaPredicted RBP5.31□□□□□ -1.56
SEC22B-202ENST00000618538 AMPHP49418 695 aa5.31□□□□□ -1.56
SEC22B-202ENST00000618538 RTF1Q92541 710 aaKnown RBP5.31□□□□□ -1.56
SEC22B-202ENST00000618538 RBM33Q96EV2 1170 aaKnown RBP5.31□□□□□ -1.56
SEC22B-202ENST00000618538 LMBRD1Q9NUN5 540 aa5.31□□□□□ -1.56
SEC22B-202ENST00000618538 NSFL1CQ9UNZ2 370 aaKnown RBP5.31□□□□□ -1.56
SEC22B-202ENST00000618538 PXDNLA1KZ92 1463 aa5.31□□□□□ -1.56
SEC22B-202ENST00000618538 PXDNQ92626 1479 aa5.31□□□□□ -1.56
SEC22B-202ENST00000618538 CEMIPQ8WUJ3 1361 aa5.3□□□□□ -1.56
SEC22B-202ENST00000618538 CRYBG1Q9Y4K1 1723 aa5.3□□□□□ -1.56
SEC22B-202ENST00000618538 GNAT3A8MTJ3 354 aa5.3□□□□□ -1.56
SEC22B-202ENST00000618538 PPP1R3GB7ZBB8 358 aa5.3□□□□□ -1.56
SEC22B-202ENST00000618538 ERC2O15083 957 aa5.3□□□□□ -1.56
SEC22B-202ENST00000618538 KCNQ3O43525 872 aa5.3□□□□□ -1.56
SEC22B-202ENST00000618538 GNAI2P04899 355 aa5.3□□□□□ -1.56
SEC22B-202ENST00000618538 FKBP5Q13451 457 aaPredicted RBP5.3□□□□□ -1.56
SEC22B-202ENST00000618538 KLHL40Q2TBA0 621 aa5.3□□□□□ -1.56
SEC22B-202ENST00000618538 MCTP1Q6DN14 999 aa5.3□□□□□ -1.56
SEC22B-202ENST00000618538 VSIG10Q8N0Z9 540 aa5.3□□□□□ -1.56
SEC22B-202ENST00000618538 GPT2Q8TD30 523 aa5.3□□□□□ -1.56
SEC22B-202ENST00000618538 LTV1Q96GA3 475 aaPredicted RBP5.3□□□□□ -1.56
SEC22B-202ENST00000618538 ESYT1Q9BSJ8 1104 aa5.3□□□□□ -1.56
SEC22B-202ENST00000618538 MX1P20591 662 aa5.29□□□□□ -1.56
SEC22B-202ENST00000618538 CHMLP26374 656 aa5.29□□□□□ -1.56
SEC22B-202ENST00000618538 CLCN1P35523 988 aa5.29□□□□□ -1.56
SEC22B-202ENST00000618538 ATP8B2P98198 1209 aa5.29□□□□□ -1.56
SEC22B-202ENST00000618538 LGR6Q9HBX8 967 aa5.29□□□□□ -1.56
SEC22B-202ENST00000618538 RBM27Q9P2N5 1060 aaKnown RBP5.29□□□□□ -1.56
SEC22B-202ENST00000618538 EID1Q9Y6B2 187 aa5.29□□□□□ -1.56
SEC22B-202ENST00000618538 HTATSF1O43719 755 aaKnown RBP5.29□□□□□ -1.56
SEC22B-202ENST00000618538 HMMRO75330 724 aa5.29□□□□□ -1.56
SEC22B-202ENST00000618538 ANXA1P04083 346 aa5.29□□□□□ -1.56
SEC22B-202ENST00000618538 NBPF6Q5VWK0 638 aa5.29□□□□□ -1.56
SEC22B-202ENST00000618538 ZDHHC16Q969W1 377 aa5.29□□□□□ -1.56
SEC22B-202ENST00000618538 TMX3Q96JJ7 454 aa5.29□□□□□ -1.56
SEC22B-202ENST00000618538 NBPF4Q96M43 638 aa5.29□□□□□ -1.56
SEC22B-202ENST00000618538 LRRCC1Q9C099 1032 aa5.29□□□□□ -1.56
SEC22B-202ENST00000618538 IL1RAPL2Q9NP60 686 aa5.29□□□□□ -1.56
SEC22B-202ENST00000618538 STAP2Q9UGK3 403 aa5.29□□□□□ -1.56
SEC22B-202ENST00000618538 SOS1Q07889 1333 aaPredicted RBP5.29□□□□□ -1.56
SEC22B-202ENST00000618538 LMO7Q8WWI1 1683 aa5.29□□□□□ -1.56
SEC22B-202ENST00000618538 CACNA1FO60840 1977 aa5.29□□□□□ -1.56
SEC22B-202ENST00000618538 REC8O95072 547 aa5.28□□□□□ -1.56
SEC22B-202ENST00000618538 NBPF7P0C2Y1 421 aaPredicted RBP5.28□□□□□ -1.56
SEC22B-202ENST00000618538 TAF7Q15545 349 aaPredicted RBP5.28□□□□□ -1.56
SEC22B-202ENST00000618538 SKOR2Q2VWA4 1001 aaPredicted RBP5.28□□□□□ -1.56
SEC22B-202ENST00000618538 ZSCAN23Q3MJ62 389 aa5.28□□□□□ -1.56
SEC22B-202ENST00000618538 FOXD4L5Q5VV16 416 aaPredicted RBP5.28□□□□□ -1.56
SEC22B-202ENST00000618538 CCDC30Q5VVM6 783 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms