RNA–Protein interactions for RNA: ENST00000618361.4

CBWD1-227, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-227ENST00000618361 C7orf43Q8WVR3 580 aa10.66□□□□□ -0.7
CBWD1-227ENST00000618361 TEX13AQ9BXU3 409 aaPredicted RBP10.66□□□□□ -0.7
CBWD1-227ENST00000618361 LGR6Q9HBX8 967 aa10.66□□□□□ -0.7
CBWD1-227ENST00000618361 ZNF219Q9P2Y4 722 aaPredicted RBP10.66□□□□□ -0.7
CBWD1-227ENST00000618361 ABT1Q9ULW3 272 aaKnown RBP10.66□□□□□ -0.7
CBWD1-227ENST00000618361 DICER1Q9UPY3 1922 aaKnown RBP10.66□□□□□ -0.7
CBWD1-227ENST00000618361 SCN4AP35499 1836 aa10.65□□□□□ -0.7
CBWD1-227ENST00000618361 IL13P35225 146 aa10.65□□□□□ -0.7
CBWD1-227ENST00000618361 IL6STP40189 918 aaPredicted RBP10.65□□□□□ -0.7
CBWD1-227ENST00000618361 ST5P78524 1137 aa10.65□□□□□ -0.7
CBWD1-227ENST00000618361 SETDB2Q96T68 719 aa10.65□□□□□ -0.7
CBWD1-227ENST00000618361 VIRMAQ69YN4 1812 aaKnown RBP10.65□□□□□ -0.71
CBWD1-227ENST00000618361 CCDC88AQ3V6T2 1871 aa10.64□□□□□ -0.71
CBWD1-227ENST00000618361 NPHP1O15259 732 aa10.64□□□□□ -0.71
CBWD1-227ENST00000618361 FKBP4Q02790 459 aaKnown RBP eCLIP10.64□□□□□ -0.71
CBWD1-227ENST00000618361 CNBD1Q8NA66 436 aa10.64□□□□□ -0.71
CBWD1-227ENST00000618361 SCN11AQ9UI33 1791 aa10.63□□□□□ -0.71
CBWD1-227ENST00000618361 FZD9O00144 591 aa10.63□□□□□ -0.71
CBWD1-227ENST00000618361 PAXIP1Q6ZW49 1069 aaPredicted RBP10.63□□□□□ -0.71
CBWD1-227ENST00000618361 RTKN2Q8IZC4 609 aa10.63□□□□□ -0.71
CBWD1-227ENST00000618361 GPC2Q8N158 579 aa10.63□□□□□ -0.71
CBWD1-227ENST00000618361 GPR101Q96P66 508 aaPredicted RBP10.63□□□□□ -0.71
CBWD1-227ENST00000618361 DDX21Q9NR30 783 aaKnown RBP eCLIP10.63□□□□□ -0.71
CBWD1-227ENST00000618361 ADAMTSL1Q8N6G6 1762 aa10.62□□□□□ -0.71
CBWD1-227ENST00000618361 ZNF541Q9H0D2 1346 aa10.62□□□□□ -0.71
CBWD1-227ENST00000618361 KLRG2A4D1S0 409 aaPredicted RBP10.62□□□□□ -0.71
CBWD1-227ENST00000618361 CA12O43570 354 aa10.62□□□□□ -0.71
CBWD1-227ENST00000618361 NPM3O75607 178 aaKnown RBP10.62□□□□□ -0.71
CBWD1-227ENST00000618361 NPR1P16066 1061 aa10.62□□□□□ -0.71
CBWD1-227ENST00000618361 MAP2K2P36507 400 aa10.62□□□□□ -0.71
CBWD1-227ENST00000618361 MAP1SQ66K74 1059 aaPredicted RBP10.62□□□□□ -0.71
CBWD1-227ENST00000618361 TTC5Q8N0Z6 440 aa10.62□□□□□ -0.71
CBWD1-227ENST00000618361 CAPNS2Q96L46 248 aa10.62□□□□□ -0.71
CBWD1-227ENST00000618361 ANKRD31Q8N7Z5 1873 aa10.61□□□□□ -0.71
CBWD1-227ENST00000618361 RGL2O15211 777 aa10.61□□□□□ -0.71
CBWD1-227ENST00000618361 CAMTA2O94983 1202 aa10.61□□□□□ -0.71
CBWD1-227ENST00000618361 CLEC4GQ6UXB4 293 aa10.61□□□□□ -0.71
CBWD1-227ENST00000618361 NPM2Q86SE8 214 aaKnown RBP10.61□□□□□ -0.71
CBWD1-227ENST00000618361 MORC1Q86VD1 984 aa10.61□□□□□ -0.71
CBWD1-227ENST00000618361 CCDC24Q8N4L8 307 aa10.61□□□□□ -0.71
CBWD1-227ENST00000618361 TBC1D2BQ9UPU7 963 aa10.61□□□□□ -0.71
CBWD1-227ENST00000618361 HEG1Q9ULI3 1381 aa10.61□□□□□ -0.71
CBWD1-227ENST00000618361 RNF123Q5XPI4 1314 aa10.6□□□□□ -0.71
CBWD1-227ENST00000618361 THSD7BQ9C0I4 1608 aa10.6□□□□□ -0.71
CBWD1-227ENST00000618361 IARSP41252 1262 aaKnown RBP10.6□□□□□ -0.71
CBWD1-227ENST00000618361 ZNF277Q9NRM2 450 aaPredicted RBP10.6□□□□□ -0.71
CBWD1-227ENST00000618361 COL11A2P13942 1736 aaPredicted RBP10.6□□□□□ -0.71
CBWD1-227ENST00000618361 ALDH1B1P30837 517 aa10.59□□□□□ -0.71
CBWD1-227ENST00000618361 GRM1Q13255 1194 aa10.59□□□□□ -0.71
CBWD1-227ENST00000618361 MTHFSDQ2M296 383 aaKnown RBP10.59□□□□□ -0.71
CBWD1-227ENST00000618361 ZNF790Q6PG37 636 aa10.59□□□□□ -0.71
CBWD1-227ENST00000618361 ZNF496Q96IT1 587 aaPredicted RBP10.59□□□□□ -0.71
CBWD1-227ENST00000618361 PSMD1Q99460 953 aa10.59□□□□□ -0.71
CBWD1-227ENST00000618361 MCOLN1Q9GZU1 580 aa10.59□□□□□ -0.71
CBWD1-227ENST00000618361 PANK3Q9H999 370 aa10.59□□□□□ -0.71
CBWD1-227ENST00000618361 TLL2Q9Y6L7 1015 aa10.59□□□□□ -0.71
CBWD1-227ENST00000618361 SCN7AQ01118 1682 aa10.59□□□□□ -0.71
CBWD1-227ENST00000618361 SLX4Q8IY92 1834 aa10.58□□□□□ -0.72
CBWD1-227ENST00000618361 LMOD1P29536 600 aaPredicted RBP10.58□□□□□ -0.72
CBWD1-227ENST00000618361 GRIPAP1Q4V328 841 aa10.58□□□□□ -0.72
CBWD1-227ENST00000618361 CC2D2BQ6DHV5 1058 aa10.58□□□□□ -0.72
CBWD1-227ENST00000618361 CYP4F22Q6NT55 531 aa10.58□□□□□ -0.72
CBWD1-227ENST00000618361 TPTE2Q6XPS3 522 aa10.58□□□□□ -0.72
CBWD1-227ENST00000618361 USP50Q70EL3 339 aaPredicted RBP10.58□□□□□ -0.72
CBWD1-227ENST00000618361 NBPF5PQ86XG9 351 aaPredicted RBP10.58□□□□□ -0.72
CBWD1-227ENST00000618361 DZIP3Q86Y13 1208 aaKnown RBP10.58□□□□□ -0.72
CBWD1-227ENST00000618361 SYNE4Q8N205 404 aa10.58□□□□□ -0.72
CBWD1-227ENST00000618361 JDP2Q8WYK2 163 aa10.58□□□□□ -0.72
CBWD1-227ENST00000618361 HHIPL1Q96JK4 782 aa10.58□□□□□ -0.72
CBWD1-227ENST00000618361 TIMELESSQ9UNS1 1208 aa10.58□□□□□ -0.72
CBWD1-227ENST00000618361 ZNF652Q9Y2D9 606 aa10.58□□□□□ -0.72
CBWD1-227ENST00000618361 UBR2Q8IWV8 1755 aa10.57□□□□□ -0.72
CBWD1-227ENST00000618361 ARFGEF2Q9Y6D5 1785 aa10.57□□□□□ -0.72
CBWD1-227ENST00000618361 BRPF1P55201 1214 aaPredicted RBP10.57□□□□□ -0.72
CBWD1-227ENST00000618361 EIF6P56537 245 aaKnown RBP10.57□□□□□ -0.72
CBWD1-227ENST00000618361 DGKZQ13574 1117 aa10.57□□□□□ -0.72
CBWD1-227ENST00000618361 CST9Q5W186 159 aa10.57□□□□□ -0.72
CBWD1-227ENST00000618361 FMNL2Q96PY5 1086 aa10.57□□□□□ -0.72
CBWD1-227ENST00000618361 ZNF330Q9Y3S2 320 aaPredicted RBP10.57□□□□□ -0.72
CBWD1-227ENST00000618361 A1BGP04217 495 aa10.56□□□□□ -0.72
CBWD1-227ENST00000618361 TEFQ10587 303 aa10.56□□□□□ -0.72
CBWD1-227ENST00000618361 HMOX1P09601 288 aa10.55□□□□□ -0.72
CBWD1-227ENST00000618361 SCNN1DP51172 638 aa10.55□□□□□ -0.72
CBWD1-227ENST00000618361 C1QBPQ07021 282 aaKnown RBP10.55□□□□□ -0.72
CBWD1-227ENST00000618361 SAPCD2Q86UD0 394 aa10.55□□□□□ -0.72
CBWD1-227ENST00000618361 POLR3GLQ9BT43 218 aa10.55□□□□□ -0.72
CBWD1-227ENST00000618361 SNED1Q8TER0 1413 aa10.55□□□□□ -0.72
CBWD1-227ENST00000618361 GNAT3A8MTJ3 354 aa10.54□□□□□ -0.72
CBWD1-227ENST00000618361 IL17REQ8NFR9 667 aa10.54□□□□□ -0.72
CBWD1-227ENST00000618361 GAS2L2Q8NHY3 880 aa10.54□□□□□ -0.72
CBWD1-227ENST00000618361 TSKSQ9UJT2 592 aa10.54□□□□□ -0.72
CBWD1-227ENST00000618361 KNSTRNQ9Y448 316 aa10.54□□□□□ -0.72
CBWD1-227ENST00000618361 AOC2O75106 756 aa10.53□□□□□ -0.72
CBWD1-227ENST00000618361 EPS15P42566 896 aa10.53□□□□□ -0.72
CBWD1-227ENST00000618361 CRY2Q49AN0 593 aa10.53□□□□□ -0.72
CBWD1-227ENST00000618361 PRPF38BQ5VTL8 546 aaKnown RBP10.53□□□□□ -0.72
CBWD1-227ENST00000618361 OLFM4Q6UX06 510 aa10.53□□□□□ -0.72
CBWD1-227ENST00000618361 VPS33BQ9H267 617 aa10.53□□□□□ -0.72
CBWD1-227ENST00000618361 ADARB2Q9NS39 739 aaKnown RBP10.53□□□□□ -0.72
CBWD1-227ENST00000618361 NIP7Q9Y221 180 aaKnown RBP eCLIP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms