RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 CWC27Q6UX04 472 aaKnown RBP15.14■□□□□ 0.01
CIITA-212ENST00000618207 AACSQ86V21 672 aa15.14■□□□□ 0.01
CIITA-212ENST00000618207 CCDC9Q9Y3X0 531 aaKnown RBP15.14■□□□□ 0.01
CIITA-212ENST00000618207 WDR17Q8IZU2 1322 aa15.14■□□□□ 0.01
CIITA-212ENST00000618207 SIPA1L3O60292 1781 aaPredicted RBP15.13■□□□□ 0.01
CIITA-212ENST00000618207 C5P01031 1676 aa15.13■□□□□ 0.01
CIITA-212ENST00000618207 NEURL1BA8MQ27 555 aa15.13■□□□□ 0.01
CIITA-212ENST00000618207 IFIT2P09913 472 aaKnown RBP15.13■□□□□ 0.01
CIITA-212ENST00000618207 SSFA2P28290 1259 aa15.13■□□□□ 0.01
CIITA-212ENST00000618207 UBE3BQ7Z3V4 1068 aa15.13■□□□□ 0.01
CIITA-212ENST00000618207 FOXD4L5Q5VV16 416 aaPredicted RBP15.13■□□□□ 0.01
CIITA-212ENST00000618207 ZGPATQ8N5A5 531 aaKnown RBP15.13■□□□□ 0.01
CIITA-212ENST00000618207 FOXD4L4Q8WXT5 416 aaPredicted RBP15.13■□□□□ 0.01
CIITA-212ENST00000618207 OVOS2A0A0G2JMS6 1433 aa15.13■□□□□ 0.01
CIITA-212ENST00000618207 ST18O60284 1047 aa15.12■□□□□ 0.01
CIITA-212ENST00000618207 A1BGP04217 495 aa15.12■□□□□ 0.01
CIITA-212ENST00000618207 NCOA3Q9Y6Q9 1424 aa15.12■□□□□ 0.01
CIITA-212ENST00000618207 LMTK3Q96Q04 1460 aa15.12■□□□□ 0.01
CIITA-212ENST00000618207 G3BP1Q13283 466 aaKnown RBP eCLIP15.12■□□□□ 0.01
CIITA-212ENST00000618207 PKP1Q13835 747 aa15.12■□□□□ 0.01
CIITA-212ENST00000618207 GCKRQ14397 625 aa15.12■□□□□ 0.01
CIITA-212ENST00000618207 HSP90AB4PQ58FF6 505 aa15.12■□□□□ 0.01
CIITA-212ENST00000618207 CHMP3Q9Y3E7 222 aa15.12■□□□□ 0.01
CIITA-212ENST00000618207 BRPF3Q9ULD4 1205 aa15.12■□□□□ 0.01
CIITA-212ENST00000618207 N4BP2Q86UW6 1770 aaPredicted RBP15.11■□□□□ 0.01
CIITA-212ENST00000618207 SOS2Q07890 1332 aaPredicted RBP15.11■□□□□ 0.01
CIITA-212ENST00000618207 A0A0G2JS52 829 aa15.11■□□□□ 0.01
CIITA-212ENST00000618207 DDIT3P35638 169 aa15.11■□□□□ 0.01
CIITA-212ENST00000618207 METTL22Q9BUU2 404 aaPredicted RBP15.11■□□□□ 0.01
CIITA-212ENST00000618207 STRCQ7RTU9 1775 aa15.11■□□□□ 0.01
CIITA-212ENST00000618207 IL2RBP14784 551 aa15.11■□□□□ 0.01
CIITA-212ENST00000618207 ZBTB3Q9H5J0 574 aa15.11■□□□□ 0.01
CIITA-212ENST00000618207 TLR7Q9NYK1 1049 aaKnown RBP15.11■□□□□ 0.01
CIITA-212ENST00000618207 CPDO75976 1380 aa15.1■□□□□ 0.01
CIITA-212ENST00000618207 A0A087WZG4 1122 aa15.1■□□□□ 0.01
CIITA-212ENST00000618207 TRAK2O60296 914 aa15.1■□□□□ 0.01
CIITA-212ENST00000618207 SASH1O94885 1247 aa15.1■□□□□ 0.01
CIITA-212ENST00000618207 TTLL7Q6ZT98 887 aa15.1■□□□□ 0.01
CIITA-212ENST00000618207 CNTROBQ8N137 903 aa15.1■□□□□ 0.01
CIITA-212ENST00000618207 LARP6Q9BRS8 491 aaKnown RBP15.1■□□□□ 0.01
CIITA-212ENST00000618207 RTN4Q9NQC3 1192 aaKnown RBP15.1■□□□□ 0.01
CIITA-212ENST00000618207 CRYBG1Q9Y4K1 1723 aa15.1■□□□□ 0.01
CIITA-212ENST00000618207 EAF2Q96CJ1 260 aaPredicted RBP15.1■□□□□ 0.01
CIITA-212ENST00000618207 MTX1Q13505 466 aa15.09■□□□□ 0.01
CIITA-212ENST00000618207 IL27Q8NEV9 243 aa15.09■□□□□ 0.01
CIITA-212ENST00000618207 PCDH11XQ9BZA7 1347 aa15.09■□□□□ 0.01
CIITA-212ENST00000618207 PCDH11YQ9BZA8 1340 aa15.09■□□□□ 0.01
CIITA-212ENST00000618207 NBPF26B4DH59 902 aa15.09■□□□□ 0.01
CIITA-212ENST00000618207 MCCP23508 829 aa15.09■□□□□ 0.01
CIITA-212ENST00000618207 NBPF14Q5TI25 921 aa15.09■□□□□ 0.01
CIITA-212ENST00000618207 NBPF10Q6P3W6 841 aaKnown RBP15.09■□□□□ 0.01
CIITA-212ENST00000618207 NBPF15Q8N660 670 aa15.09■□□□□ 0.01
CIITA-212ENST00000618207 BOLA2Q9H3K6 86 aa15.09■□□□□ 0.01
CIITA-212ENST00000618207 BTG4Q9NY30 223 aa15.09■□□□□ 0.01
CIITA-212ENST00000618207 DTNBO60941 627 aa15.08■□□□□ 0.01
CIITA-212ENST00000618207 RAB3GAP1Q15042 981 aa15.08■□□□□ 0.01
CIITA-212ENST00000618207 CHAMP1Q96JM3 812 aa15.08■□□□□ 0.01
CIITA-212ENST00000618207 NDUFB9Q9Y6M9 179 aa15.08■□□□□ 0.01
CIITA-212ENST00000618207 LRP10Q7Z4F1 713 aa15.08■□□□□ 0
CIITA-212ENST00000618207 DIAPH3Q9NSV4 1193 aa15.07■□□□□ 0
CIITA-212ENST00000618207 ECHDC1Q9NTX5 307 aa15.07■□□□□ 0
CIITA-212ENST00000618207 HDAC5Q9UQL6 1122 aa15.07■□□□□ 0
CIITA-212ENST00000618207 COL5A2P05997 1499 aaPredicted RBP15.07■□□□□ 0
CIITA-212ENST00000618207 GLRX3O76003 335 aaKnown RBP15.07■□□□□ 0
CIITA-212ENST00000618207 SYTL4Q96C24 671 aaPredicted RBP15.07■□□□□ 0
CIITA-212ENST00000618207 EDC3Q96F86 508 aaKnown RBP15.07■□□□□ 0
CIITA-212ENST00000618207 ADAMTS7Q9UKP4 1686 aa15.06■□□□□ 0
CIITA-212ENST00000618207 CPA1P15085 419 aa15.06■□□□□ 0
CIITA-212ENST00000618207 KIAA1211Q6ZU35 1233 aa15.06■□□□□ 0
CIITA-212ENST00000618207 GBP4Q96PP9 640 aa15.06■□□□□ 0
CIITA-212ENST00000618207 CARD10Q9BWT7 1032 aa15.06■□□□□ 0
CIITA-212ENST00000618207 CIZ1Q9ULV3 898 aaPredicted RBP15.06■□□□□ 0
CIITA-212ENST00000618207 TUBGCP6Q96RT7 1819 aa15.05■□□□□ 0
CIITA-212ENST00000618207 AOX1Q06278 1338 aa15.05■□□□□ 0
CIITA-212ENST00000618207 SGSM2O43147 1006 aa15.05■□□□□ 0
CIITA-212ENST00000618207 FOXD4L6Q3SYB3 417 aaPredicted RBP15.05■□□□□ 0
CIITA-212ENST00000618207 FOXD4L3Q6VB84 417 aaPredicted RBP15.05■□□□□ 0
CIITA-212ENST00000618207 ERC1Q8IUD2 1116 aa15.05■□□□□ 0
CIITA-212ENST00000618207 GPATCH3Q96I76 525 aa15.05■□□□□ 0
CIITA-212ENST00000618207 TMX3Q96JJ7 454 aa15.05■□□□□ 0
CIITA-212ENST00000618207 CCDC85AQ96PX6 553 aaPredicted RBP15.05■□□□□ 0
CIITA-212ENST00000618207 LMBR1LQ6UX01 489 aa15.04■□□□□ -0
CIITA-212ENST00000618207 ASAP1Q9ULH1 1129 aa15.04■□□□□ -0
CIITA-212ENST00000618207 DDX11L8A8MPP1 907 aa15.04■□□□□ -0
CIITA-212ENST00000618207 TMOD3Q9NYL9 352 aa15.04■□□□□ -0
CIITA-212ENST00000618207 UTYO14607 1347 aa15.04■□□□□ -0
CIITA-212ENST00000618207 TTC41PQ6P2S7 1318 aa15.04■□□□□ -0
CIITA-212ENST00000618207 TFCP2Q12800 502 aa15.03■□□□□ -0
CIITA-212ENST00000618207 MCTP1Q6DN14 999 aa15.03■□□□□ -0
CIITA-212ENST00000618207 RASEFQ8IZ41 740 aa15.03■□□□□ -0
CIITA-212ENST00000618207 PLBD2Q8NHP8 589 aa15.03■□□□□ -0
CIITA-212ENST00000618207 FAM227BQ96M60 508 aa15.03■□□□□ -0
CIITA-212ENST00000618207 PTH1RQ03431 593 aa15.03■□□□□ -0
CIITA-212ENST00000618207 ERVV-2B6SEH9 535 aa15.02■□□□□ -0
CIITA-212ENST00000618207 CHGBP05060 677 aa15.02■□□□□ -0
CIITA-212ENST00000618207 FSD1Q9BTV5 496 aa15.02■□□□□ -0
CIITA-212ENST00000618207 NCLP19338 710 aaKnown RBP15.02□□□□□ -0.01
CIITA-212ENST00000618207 KCNJ4P48050 445 aa15.02□□□□□ -0.01
CIITA-212ENST00000618207 PTPN12Q05209 780 aaKnown RBP15.02□□□□□ -0.01
CIITA-212ENST00000618207 AFDNP55196 1824 aaKnown RBP15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms