RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 SURF6O75683 361 aaKnown RBP9.68□□□□□ -0.86
NEK3-207ENST00000617054 ERICH6Q7L0X2 663 aa9.68□□□□□ -0.86
NEK3-207ENST00000617054 KLHDC4Q8TBB5 520 aa9.68□□□□□ -0.86
NEK3-207ENST00000617054 ZBTB3Q9H5J0 574 aa9.68□□□□□ -0.86
NEK3-207ENST00000617054 NOP58Q9Y2X3 529 aaKnown RBP9.68□□□□□ -0.86
NEK3-207ENST00000617054 ADAMTS7Q9UKP4 1686 aa9.68□□□□□ -0.86
NEK3-207ENST00000617054 FAM182BQ5T319 152 aa9.67□□□□□ -0.86
NEK3-207ENST00000617054 NGLY1Q96IV0 654 aa9.67□□□□□ -0.86
NEK3-207ENST00000617054 ABCC6O95255 1503 aa9.67□□□□□ -0.86
NEK3-207ENST00000617054 DDX58O95786 925 aaKnown RBP9.67□□□□□ -0.86
NEK3-207ENST00000617054 MYT1Q01538 1121 aa9.67□□□□□ -0.86
NEK3-207ENST00000617054 NUTM1Q86Y26 1132 aa9.67□□□□□ -0.86
NEK3-207ENST00000617054 DNAJC10Q8IXB1 793 aa9.67□□□□□ -0.86
NEK3-207ENST00000617054 PROM2Q8N271 834 aa9.67□□□□□ -0.86
NEK3-207ENST00000617054 SUCLG2Q96I99 432 aa9.67□□□□□ -0.86
NEK3-207ENST00000617054 ATG3Q9NT62 314 aa9.67□□□□□ -0.86
NEK3-207ENST00000617054 COL16A1Q07092 1604 aaPredicted RBP9.66□□□□□ -0.86
NEK3-207ENST00000617054 FAM98CQ17RN3 349 aaKnown RBP9.66□□□□□ -0.86
NEK3-207ENST00000617054 KAZALD1Q96I82 304 aa9.66□□□□□ -0.86
NEK3-207ENST00000617054 RNF25Q96BH1 459 aaPredicted RBP9.66□□□□□ -0.86
NEK3-207ENST00000617054 SLC4A9Q96Q91 983 aa9.66□□□□□ -0.86
NEK3-207ENST00000617054 SIL1Q9H173 461 aa9.66□□□□□ -0.86
NEK3-207ENST00000617054 BICC1Q9H694 974 aaKnown RBP9.66□□□□□ -0.86
NEK3-207ENST00000617054 AHDC1Q5TGY3 1603 aaPredicted RBP9.66□□□□□ -0.86
NEK3-207ENST00000617054 PARP4Q9UKK3 1724 aaKnown RBP9.66□□□□□ -0.86
NEK3-207ENST00000617054 NEURL1BA8MQ27 555 aa9.65□□□□□ -0.86
NEK3-207ENST00000617054 GRM8O00222 908 aa9.65□□□□□ -0.86
NEK3-207ENST00000617054 MAP4K4O95819 1239 aaPredicted RBP9.65□□□□□ -0.86
NEK3-207ENST00000617054 DDB1Q16531 1140 aa9.65□□□□□ -0.86
NEK3-207ENST00000617054 EPHA10Q5JZY3 1008 aa9.65□□□□□ -0.86
NEK3-207ENST00000617054 LINS1Q8NG48 757 aa9.65□□□□□ -0.86
NEK3-207ENST00000617054 CHMP4AQ9BY43 222 aa9.65□□□□□ -0.86
NEK3-207ENST00000617054 LRRCC1Q9C099 1032 aa9.65□□□□□ -0.86
NEK3-207ENST00000617054 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.65□□□□□ -0.86
NEK3-207ENST00000617054 SPATA31A1Q5TZJ5 1347 aa9.65□□□□□ -0.86
NEK3-207ENST00000617054 SHANK3Q9BYB0 1731 aa9.65□□□□□ -0.86
NEK3-207ENST00000617054 KCNQ4P56696 695 aa9.65□□□□□ -0.86
NEK3-207ENST00000617054 KCNQ2O43526 872 aa9.65□□□□□ -0.87
NEK3-207ENST00000617054 BMP2KLQ5H9B9 411 aa9.65□□□□□ -0.87
NEK3-207ENST00000617054 TBC1D9Q6ZT07 1266 aa9.65□□□□□ -0.87
NEK3-207ENST00000617054 UBE3BQ7Z3V4 1068 aa9.65□□□□□ -0.87
NEK3-207ENST00000617054 SSH3Q8TE77 659 aa9.65□□□□□ -0.87
NEK3-207ENST00000617054 METTL22Q9BUU2 404 aaPredicted RBP9.65□□□□□ -0.87
NEK3-207ENST00000617054 NEXNQ0ZGT2 675 aa9.64□□□□□ -0.87
NEK3-207ENST00000617054 GCKRQ14397 625 aa9.64□□□□□ -0.87
NEK3-207ENST00000617054 MARCH10Q8NA82 808 aaPredicted RBP9.64□□□□□ -0.87
NEK3-207ENST00000617054 MRC1P22897 1456 aa9.64□□□□□ -0.87
NEK3-207ENST00000617054 SDSP20132 328 aa9.64□□□□□ -0.87
NEK3-207ENST00000617054 OS9Q13438 667 aaPredicted RBP9.64□□□□□ -0.87
NEK3-207ENST00000617054 TTC22Q5TAA0 569 aa9.64□□□□□ -0.87
NEK3-207ENST00000617054 PTF1AQ7RTS3 328 aa9.64□□□□□ -0.87
NEK3-207ENST00000617054 COL14A1Q05707 1796 aaKnown RBP9.63□□□□□ -0.87
NEK3-207ENST00000617054 A0A087WZG4 1122 aa9.63□□□□□ -0.87
NEK3-207ENST00000617054 PDE1AP54750 535 aa9.63□□□□□ -0.87
NEK3-207ENST00000617054 UPF2Q9HAU5 1272 aaKnown RBP9.63□□□□□ -0.87
NEK3-207ENST00000617054 TOGARAM1Q9Y4F4 1720 aa9.63□□□□□ -0.87
NEK3-207ENST00000617054 ALDH1L1O75891 902 aa9.63□□□□□ -0.87
NEK3-207ENST00000617054 C22orf23Q9BZE7 217 aa9.63□□□□□ -0.87
NEK3-207ENST00000617054 PXDNLA1KZ92 1463 aa9.62□□□□□ -0.87
NEK3-207ENST00000617054 DISP2A7MBM2 1401 aa9.62□□□□□ -0.87
NEK3-207ENST00000617054 IBTKQ9P2D0 1353 aaPredicted RBP9.62□□□□□ -0.87
NEK3-207ENST00000617054 POLA2Q14181 598 aa9.62□□□□□ -0.87
NEK3-207ENST00000617054 RHPN1Q8TCX5 695 aa9.62□□□□□ -0.87
NEK3-207ENST00000617054 TBC1D32Q96NH3 1257 aa9.62□□□□□ -0.87
NEK3-207ENST00000617054 CCDC85AQ96PX6 553 aaPredicted RBP9.62□□□□□ -0.87
NEK3-207ENST00000617054 KCPQ6ZWJ8 1503 aa9.62□□□□□ -0.87
NEK3-207ENST00000617054 SPATA31A5Q5VU36 1347 aa9.62□□□□□ -0.87
NEK3-207ENST00000617054 SPATA31A7Q8IWB4 1347 aa9.62□□□□□ -0.87
NEK3-207ENST00000617054 SMIM5Q71RC9 77 aa9.62□□□□□ -0.87
NEK3-207ENST00000617054 UNC5CLQ8IV45 518 aa9.62□□□□□ -0.87
NEK3-207ENST00000617054 RILPL2Q969X0 211 aa9.62□□□□□ -0.87
NEK3-207ENST00000617054 CHMP3Q9Y3E7 222 aa9.62□□□□□ -0.87
NEK3-207ENST00000617054 SYNE4Q8N205 404 aa9.62□□□□□ -0.87
NEK3-207ENST00000617054 PLBD2Q8NHP8 589 aa9.62□□□□□ -0.87
NEK3-207ENST00000617054 TRIM6-TRIM34B2RNG4 842 aa9.61□□□□□ -0.87
NEK3-207ENST00000617054 MX1P20591 662 aa9.61□□□□□ -0.87
NEK3-207ENST00000617054 HSPA1LP34931 641 aa9.61□□□□□ -0.87
NEK3-207ENST00000617054 ANP32EQ9BTT0 268 aa9.61□□□□□ -0.87
NEK3-207ENST00000617054 CIZ1Q9ULV3 898 aaPredicted RBP9.61□□□□□ -0.87
NEK3-207ENST00000617054 TBC1D2BQ9UPU7 963 aa9.61□□□□□ -0.87
NEK3-207ENST00000617054 ZBTB1Q9Y2K1 713 aa9.61□□□□□ -0.87
NEK3-207ENST00000617054 GLI3P10071 1580 aa9.61□□□□□ -0.87
NEK3-207ENST00000617054 GPTP24298 496 aa9.6□□□□□ -0.87
NEK3-207ENST00000617054 HLFQ16534 295 aa9.6□□□□□ -0.87
NEK3-207ENST00000617054 COL22A1Q8NFW1 1626 aaPredicted RBP9.6□□□□□ -0.87
NEK3-207ENST00000617054 PLCH1Q4KWH8 1693 aa9.6□□□□□ -0.87
NEK3-207ENST00000617054 CERKQ8TCT0 537 aa9.6□□□□□ -0.87
NEK3-207ENST00000617054 BCL9O00512 1426 aa9.6□□□□□ -0.87
NEK3-207ENST00000617054 CCDC8Q9H0W5 538 aaPredicted RBP9.6□□□□□ -0.87
NEK3-207ENST00000617054 ITGB4P16144 1822 aa9.59□□□□□ -0.87
NEK3-207ENST00000617054 FAM177BA6PVY3 158 aa9.59□□□□□ -0.87
NEK3-207ENST00000617054 FAM89AQ96GI7 184 aa9.59□□□□□ -0.87
NEK3-207ENST00000617054 USP21Q9UK80 565 aa9.59□□□□□ -0.87
NEK3-207ENST00000617054 CDC45O75419 566 aa9.59□□□□□ -0.87
NEK3-207ENST00000617054 SASH1O94885 1247 aa9.59□□□□□ -0.87
NEK3-207ENST00000617054 STARD3NLO95772 234 aa9.59□□□□□ -0.87
NEK3-207ENST00000617054 CYP19A1P11511 503 aaPredicted RBP9.59□□□□□ -0.87
NEK3-207ENST00000617054 ATP6V1AP38606 617 aa9.59□□□□□ -0.87
NEK3-207ENST00000617054 LMBR1LQ6UX01 489 aa9.59□□□□□ -0.87
NEK3-207ENST00000617054 SALL3Q9BXA9 1300 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms