RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 POLA2Q14181 598 aa13.93□□□□□ -0.18
PCDHGA9-202ENST00000616887 JARID2Q92833 1246 aaPredicted RBP13.93□□□□□ -0.18
PCDHGA9-202ENST00000616887 OSBPL3Q9H4L5 887 aa13.93□□□□□ -0.18
PCDHGA9-202ENST00000616887 RILPL2Q969X0 211 aa13.92□□□□□ -0.18
PCDHGA9-202ENST00000616887 USP26Q9BXU7 913 aa13.92□□□□□ -0.18
PCDHGA9-202ENST00000616887 BCL11BQ9C0K0 894 aaPredicted RBP13.92□□□□□ -0.18
PCDHGA9-202ENST00000616887 PRDM10Q9NQV6 1147 aa13.92□□□□□ -0.18
PCDHGA9-202ENST00000616887 DDX21Q9NR30 783 aaKnown RBP eCLIP13.92□□□□□ -0.18
PCDHGA9-202ENST00000616887 C9orf78Q9NZ63 289 aaPredicted RBP13.92□□□□□ -0.18
PCDHGA9-202ENST00000616887 NUTM2BA6NNL0 878 aaPredicted RBP13.92□□□□□ -0.18
PCDHGA9-202ENST00000616887 NUTM2EB1AL46 878 aaPredicted RBP13.92□□□□□ -0.18
PCDHGA9-202ENST00000616887 TRIM6-TRIM34B2RNG4 842 aa13.92□□□□□ -0.18
PCDHGA9-202ENST00000616887 NUTM2AQ8IVF1 878 aaPredicted RBP13.92□□□□□ -0.18
PCDHGA9-202ENST00000616887 HOMEZQ8IX15 550 aa13.92□□□□□ -0.18
PCDHGA9-202ENST00000616887 XAGE3Q8WTP9 111 aa13.92□□□□□ -0.18
PCDHGA9-202ENST00000616887 DCAF5Q96JK2 942 aa13.92□□□□□ -0.18
PCDHGA9-202ENST00000616887 MAP7D2Q96T17 732 aa13.92□□□□□ -0.18
PCDHGA9-202ENST00000616887 IL25Q9H293 177 aa13.92□□□□□ -0.18
PCDHGA9-202ENST00000616887 ISY1Q9ULR0 285 aaKnown RBP13.92□□□□□ -0.18
PCDHGA9-202ENST00000616887 SCN11AQ9UI33 1791 aa13.92□□□□□ -0.18
PCDHGA9-202ENST00000616887 IGKV5-2P06315 115 aa13.91□□□□□ -0.18
PCDHGA9-202ENST00000616887 LARP1Q6PKG0 1096 aaKnown RBP13.91□□□□□ -0.18
PCDHGA9-202ENST00000616887 COPS6Q7L5N1 327 aa13.91□□□□□ -0.18
PCDHGA9-202ENST00000616887 RHPN1Q8TCX5 695 aa13.91□□□□□ -0.18
PCDHGA9-202ENST00000616887 KAZALD1Q96I82 304 aa13.91□□□□□ -0.18
PCDHGA9-202ENST00000616887 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.91□□□□□ -0.18
PCDHGA9-202ENST00000616887 WDR17Q8IZU2 1322 aa13.91□□□□□ -0.18
PCDHGA9-202ENST00000616887 ABCA3Q99758 1704 aa13.91□□□□□ -0.18
PCDHGA9-202ENST00000616887 SMAP1Q8IYB5 467 aaPredicted RBP13.91□□□□□ -0.18
PCDHGA9-202ENST00000616887 SUCLG2Q96I99 432 aa13.91□□□□□ -0.18
PCDHGA9-202ENST00000616887 HYPKQ9NX55 129 aa13.91□□□□□ -0.18
PCDHGA9-202ENST00000616887 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.91□□□□□ -0.18
PCDHGA9-202ENST00000616887 R3HCC1Q9Y3T6 440 aaKnown RBP13.91□□□□□ -0.18
PCDHGA9-202ENST00000616887 COL5A2P05997 1499 aaPredicted RBP13.91□□□□□ -0.18
PCDHGA9-202ENST00000616887 CABP4P57796 275 aa13.9□□□□□ -0.18
PCDHGA9-202ENST00000616887 TTC5Q8N0Z6 440 aa13.9□□□□□ -0.18
PCDHGA9-202ENST00000616887 SPATA31A6Q5VVP1 1343 aa13.9□□□□□ -0.18
PCDHGA9-202ENST00000616887 DDX11L8A8MPP1 907 aa13.9□□□□□ -0.18
PCDHGA9-202ENST00000616887 RIC3Q7Z5B4 369 aa13.9□□□□□ -0.18
PCDHGA9-202ENST00000616887 DDX54Q8TDD1 881 aaKnown RBP13.9□□□□□ -0.18
PCDHGA9-202ENST00000616887 HSP90AB1P08238 724 aaKnown RBP13.89□□□□□ -0.19
PCDHGA9-202ENST00000616887 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.89□□□□□ -0.19
PCDHGA9-202ENST00000616887 LRP10Q7Z4F1 713 aa13.89□□□□□ -0.19
PCDHGA9-202ENST00000616887 ZSCAN30Q86W11 494 aa13.89□□□□□ -0.19
PCDHGA9-202ENST00000616887 KLHDC4Q8TBB5 520 aa13.89□□□□□ -0.19
PCDHGA9-202ENST00000616887 SNX21Q969T3 373 aa13.89□□□□□ -0.19
PCDHGA9-202ENST00000616887 BICC1Q9H694 974 aaKnown RBP13.89□□□□□ -0.19
PCDHGA9-202ENST00000616887 LRP6O75581 1613 aa13.88□□□□□ -0.19
PCDHGA9-202ENST00000616887 GRM8O00222 908 aa13.88□□□□□ -0.19
PCDHGA9-202ENST00000616887 MSNP26038 577 aaKnown RBP13.88□□□□□ -0.19
PCDHGA9-202ENST00000616887 MYD88Q99836 296 aa13.88□□□□□ -0.19
PCDHGA9-202ENST00000616887 ADAMTS2O95450 1211 aa13.88□□□□□ -0.19
PCDHGA9-202ENST00000616887 OS9Q13438 667 aaPredicted RBP13.88□□□□□ -0.19
PCDHGA9-202ENST00000616887 LINS1Q8NG48 757 aa13.88□□□□□ -0.19
PCDHGA9-202ENST00000616887 MRC1P22897 1456 aa13.88□□□□□ -0.19
PCDHGA9-202ENST00000616887 PKD1L3Q7Z443 1732 aa13.87□□□□□ -0.19
PCDHGA9-202ENST00000616887 SNRPA1P09661 255 aaKnown RBP13.87□□□□□ -0.19
PCDHGA9-202ENST00000616887 EPHA10Q5JZY3 1008 aa13.87□□□□□ -0.19
PCDHGA9-202ENST00000616887 CASC1Q6TDU7 716 aa13.87□□□□□ -0.19
PCDHGA9-202ENST00000616887 ZCRB1Q8TBF4 217 aaKnown RBP13.87□□□□□ -0.19
PCDHGA9-202ENST00000616887 PI4K2BQ8TCG2 481 aa13.87□□□□□ -0.19
PCDHGA9-202ENST00000616887 ERC2O15083 957 aa13.87□□□□□ -0.19
PCDHGA9-202ENST00000616887 PTCD1O75127 700 aaKnown RBP13.87□□□□□ -0.19
PCDHGA9-202ENST00000616887 ALDH1L1O75891 902 aa13.87□□□□□ -0.19
PCDHGA9-202ENST00000616887 FMNL2Q96PY5 1086 aa13.87□□□□□ -0.19
PCDHGA9-202ENST00000616887 CHMP4AQ9BY43 222 aa13.87□□□□□ -0.19
PCDHGA9-202ENST00000616887 STAP2Q9UGK3 403 aa13.87□□□□□ -0.19
PCDHGA9-202ENST00000616887 ATP5J2-PTCD1G3V325 749 aa13.86□□□□□ -0.19
PCDHGA9-202ENST00000616887 K7ELQ4 463 aaPredicted RBP13.86□□□□□ -0.19
PCDHGA9-202ENST00000616887 DDX58O95786 925 aaKnown RBP13.86□□□□□ -0.19
PCDHGA9-202ENST00000616887 KIF1BPQ96EK5 621 aa13.86□□□□□ -0.19
PCDHGA9-202ENST00000616887 SIL1Q9H173 461 aa13.86□□□□□ -0.19
PCDHGA9-202ENST00000616887 GLI3P10071 1580 aa13.86□□□□□ -0.19
PCDHGA9-202ENST00000616887 NEURL1BA8MQ27 555 aa13.86□□□□□ -0.19
PCDHGA9-202ENST00000616887 CHMLP26374 656 aa13.86□□□□□ -0.19
PCDHGA9-202ENST00000616887 DDIT3P35638 169 aa13.86□□□□□ -0.19
PCDHGA9-202ENST00000616887 TERF1P54274 439 aa13.86□□□□□ -0.19
PCDHGA9-202ENST00000616887 CCDC173Q0VFZ6 552 aa13.86□□□□□ -0.19
PCDHGA9-202ENST00000616887 ESYT1Q9BSJ8 1104 aa13.86□□□□□ -0.19
PCDHGA9-202ENST00000616887 PALD1Q9ULE6 856 aa13.86□□□□□ -0.19
PCDHGA9-202ENST00000616887 BBXQ8WY36 941 aaPredicted RBP13.85□□□□□ -0.19
PCDHGA9-202ENST00000616887 TUBGCP6Q96RT7 1819 aa13.85□□□□□ -0.19
PCDHGA9-202ENST00000616887 PCDH11XQ9BZA7 1347 aa13.85□□□□□ -0.19
PCDHGA9-202ENST00000616887 PCDH11YQ9BZA8 1340 aa13.85□□□□□ -0.19
PCDHGA9-202ENST00000616887 UQCRHLA0A096LP55 91 aa13.85□□□□□ -0.19
PCDHGA9-202ENST00000616887 RAB11FIP3O75154 756 aa13.85□□□□□ -0.19
PCDHGA9-202ENST00000616887 UQCRHP07919 91 aa13.85□□□□□ -0.19
PCDHGA9-202ENST00000616887 MTX1Q13505 466 aa13.85□□□□□ -0.19
PCDHGA9-202ENST00000616887 ANO2Q9NQ90 1003 aa13.85□□□□□ -0.19
PCDHGA9-202ENST00000616887 NBPF26B4DH59 902 aa13.84□□□□□ -0.19
PCDHGA9-202ENST00000616887 IL2RBP14784 551 aa13.84□□□□□ -0.19
PCDHGA9-202ENST00000616887 EVA1CP58658 441 aa13.84□□□□□ -0.19
PCDHGA9-202ENST00000616887 NBPF14Q5TI25 921 aa13.84□□□□□ -0.19
PCDHGA9-202ENST00000616887 NBPF10Q6P3W6 841 aaKnown RBP13.84□□□□□ -0.19
PCDHGA9-202ENST00000616887 ANKRD13DQ6ZTN6 518 aa13.84□□□□□ -0.19
PCDHGA9-202ENST00000616887 NBPF15Q8N660 670 aa13.84□□□□□ -0.19
PCDHGA9-202ENST00000616887 REC8O95072 547 aa13.84□□□□□ -0.19
PCDHGA9-202ENST00000616887 GCKRQ14397 625 aa13.84□□□□□ -0.19
PCDHGA9-202ENST00000616887 MEX3CQ5U5Q3 659 aaKnown RBP13.83□□□□□ -0.19
PCDHGA9-202ENST00000616887 PPP1R9BQ96SB3 815 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms