RNA–Protein interactions for RNA: ENST00000616706.4

LINC00598-207, long intergenic non-protein coding RNA 598, humanhuman

TSL 1 (best) BASIC

Gene LINC00598, Length 2,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-207ENST00000616706 USP44Q9H0E7 712 aa12.78□□□□□ -0.36
LINC00598-207ENST00000616706 LRRFIP2Q9Y608 721 aaKnown RBP12.78□□□□□ -0.36
LINC00598-207ENST00000616706 ATP8B2P98198 1209 aa12.77□□□□□ -0.36
LINC00598-207ENST00000616706 OSBPL3Q9H4L5 887 aa12.77□□□□□ -0.36
LINC00598-207ENST00000616706 CHMP5Q9NZZ3 219 aa12.77□□□□□ -0.36
LINC00598-207ENST00000616706 IBTKQ9P2D0 1353 aaPredicted RBP12.77□□□□□ -0.36
LINC00598-207ENST00000616706 BCL9O00512 1426 aa12.77□□□□□ -0.36
LINC00598-207ENST00000616706 TOGARAM1Q9Y4F4 1720 aa12.77□□□□□ -0.36
LINC00598-207ENST00000616706 RXRBP28702 533 aa12.76□□□□□ -0.37
LINC00598-207ENST00000616706 PIP4K2AP48426 406 aaPredicted RBP12.76□□□□□ -0.37
LINC00598-207ENST00000616706 PDE1AP54750 535 aa12.76□□□□□ -0.37
LINC00598-207ENST00000616706 DBF4Q9UBU7 674 aaPredicted RBP12.76□□□□□ -0.37
LINC00598-207ENST00000616706 MYL6BP14649 208 aa12.76□□□□□ -0.37
LINC00598-207ENST00000616706 PROSER3Q2NL68 480 aa12.76□□□□□ -0.37
LINC00598-207ENST00000616706 PTF1AQ7RTS3 328 aa12.76□□□□□ -0.37
LINC00598-207ENST00000616706 USP26Q9BXU7 913 aa12.76□□□□□ -0.37
LINC00598-207ENST00000616706 RGS17Q9UGC6 210 aaPredicted RBP12.76□□□□□ -0.37
LINC00598-207ENST00000616706 ADCY9O60503 1353 aa12.75□□□□□ -0.37
LINC00598-207ENST00000616706 KRT27Q7Z3Y8 459 aa12.75□□□□□ -0.37
LINC00598-207ENST00000616706 LRRCC1Q9C099 1032 aa12.75□□□□□ -0.37
LINC00598-207ENST00000616706 UBTFL1P0CB47 393 aaPredicted RBP12.74□□□□□ -0.37
LINC00598-207ENST00000616706 TSHZ3Q63HK5 1081 aa12.74□□□□□ -0.37
LINC00598-207ENST00000616706 SRCIN1Q9C0H9 1055 aa12.74□□□□□ -0.37
LINC00598-207ENST00000616706 K7ELQ4 463 aaPredicted RBP12.74□□□□□ -0.37
LINC00598-207ENST00000616706 A1BGP04217 495 aa12.74□□□□□ -0.37
LINC00598-207ENST00000616706 AIMP1Q12904 312 aaKnown RBP12.74□□□□□ -0.37
LINC00598-207ENST00000616706 POTEAQ6S8J7 498 aa12.74□□□□□ -0.37
LINC00598-207ENST00000616706 DNAJC10Q8IXB1 793 aa12.74□□□□□ -0.37
LINC00598-207ENST00000616706 DDX21Q9NR30 783 aaKnown RBP eCLIP12.74□□□□□ -0.37
LINC00598-207ENST00000616706 ITGB4P16144 1822 aa12.74□□□□□ -0.37
LINC00598-207ENST00000616706 THSD7AQ9UPZ6 1657 aa12.74□□□□□ -0.37
LINC00598-207ENST00000616706 EIF5BO60841 1220 aaKnown RBP12.73□□□□□ -0.37
LINC00598-207ENST00000616706 PDIA6Q15084 440 aa12.73□□□□□ -0.37
LINC00598-207ENST00000616706 BEND3Q5T5X7 828 aa12.73□□□□□ -0.37
LINC00598-207ENST00000616706 SSH3Q8TE77 659 aa12.73□□□□□ -0.37
LINC00598-207ENST00000616706 SLC4A9Q96Q91 983 aa12.73□□□□□ -0.37
LINC00598-207ENST00000616706 AFDNP55196 1824 aaKnown RBP12.73□□□□□ -0.37
LINC00598-207ENST00000616706 PI4KAP2A4QPH2 592 aa12.73□□□□□ -0.37
LINC00598-207ENST00000616706 NBPF7P0C2Y1 421 aaPredicted RBP12.73□□□□□ -0.37
LINC00598-207ENST00000616706 MX1P20591 662 aa12.73□□□□□ -0.37
LINC00598-207ENST00000616706 MCM4P33991 863 aa12.73□□□□□ -0.37
LINC00598-207ENST00000616706 CASC1Q6TDU7 716 aa12.73□□□□□ -0.37
LINC00598-207ENST00000616706 PI4KAP1Q8N8J0 262 aa12.73□□□□□ -0.37
LINC00598-207ENST00000616706 DNAAF4Q8WXU2 420 aa12.73□□□□□ -0.37
LINC00598-207ENST00000616706 HYPKQ9NX55 129 aa12.73□□□□□ -0.37
LINC00598-207ENST00000616706 DOT1LQ8TEK3 1739 aa12.72□□□□□ -0.37
LINC00598-207ENST00000616706 KCPQ6ZWJ8 1503 aa12.72□□□□□ -0.37
LINC00598-207ENST00000616706 VSIG10Q8N0Z9 540 aa12.72□□□□□ -0.37
LINC00598-207ENST00000616706 LAMB4A4D0S4 1761 aa12.72□□□□□ -0.37
LINC00598-207ENST00000616706 ATP6V1AP38606 617 aa12.71□□□□□ -0.37
LINC00598-207ENST00000616706 POLA2Q14181 598 aa12.71□□□□□ -0.37
LINC00598-207ENST00000616706 SMARCC1Q92922 1105 aaPredicted RBP12.71□□□□□ -0.37
LINC00598-207ENST00000616706 TEX13AQ9BXU3 409 aaPredicted RBP12.71□□□□□ -0.37
LINC00598-207ENST00000616706 STARD3NLO95772 234 aa12.71□□□□□ -0.38
LINC00598-207ENST00000616706 RABEP1Q15276 862 aa12.71□□□□□ -0.38
LINC00598-207ENST00000616706 FAM196AQ6ZSG2 479 aa12.71□□□□□ -0.38
LINC00598-207ENST00000616706 PPP1R42Q7Z4L9 355 aa12.71□□□□□ -0.38
LINC00598-207ENST00000616706 LOC102724428A0A0B4J2F2 783 aa12.7□□□□□ -0.38
LINC00598-207ENST00000616706 NBPF26B4DH59 902 aa12.7□□□□□ -0.38
LINC00598-207ENST00000616706 SIK1P57059 783 aa12.7□□□□□ -0.38
LINC00598-207ENST00000616706 NBPF14Q5TI25 921 aa12.7□□□□□ -0.38
LINC00598-207ENST00000616706 NBPF10Q6P3W6 841 aaKnown RBP12.7□□□□□ -0.38
LINC00598-207ENST00000616706 COPS6Q7L5N1 327 aa12.7□□□□□ -0.38
LINC00598-207ENST00000616706 NBPF15Q8N660 670 aa12.7□□□□□ -0.38
LINC00598-207ENST00000616706 XAGE3Q8WTP9 111 aa12.7□□□□□ -0.38
LINC00598-207ENST00000616706 FOXD4L1Q9NU39 408 aa12.7□□□□□ -0.38
LINC00598-207ENST00000616706 STAP2Q9UGK3 403 aa12.7□□□□□ -0.38
LINC00598-207ENST00000616706 CIZ1Q9ULV3 898 aaPredicted RBP12.7□□□□□ -0.38
LINC00598-207ENST00000616706 ZNF330Q9Y3S2 320 aaPredicted RBP12.7□□□□□ -0.38
LINC00598-207ENST00000616706 ARFGEF2Q9Y6D5 1785 aa12.7□□□□□ -0.38
LINC00598-207ENST00000616706 ERC2O15083 957 aa12.69□□□□□ -0.38
LINC00598-207ENST00000616706 KCNQ4P56696 695 aa12.69□□□□□ -0.38
LINC00598-207ENST00000616706 PALLDQ8WX93 1383 aa12.69□□□□□ -0.38
LINC00598-207ENST00000616706 EP400Q96L91 3159 aa12.69□□□□□ -0.38
LINC00598-207ENST00000616706 REC8O95072 547 aa12.69□□□□□ -0.38
LINC00598-207ENST00000616706 ILDR1Q86SU0 546 aaPredicted RBP12.69□□□□□ -0.38
LINC00598-207ENST00000616706 ARXQ96QS3 562 aa12.69□□□□□ -0.38
LINC00598-207ENST00000616706 IL1RAPL2Q9NP60 686 aa12.69□□□□□ -0.38
LINC00598-207ENST00000616706 PAPPAQ13219 1627 aa12.68□□□□□ -0.38
LINC00598-207ENST00000616706 SRGAP3O43295 1099 aa12.68□□□□□ -0.38
LINC00598-207ENST00000616706 TRIM37O94972 964 aa12.68□□□□□ -0.38
LINC00598-207ENST00000616706 CYP19A1P11511 503 aaPredicted RBP12.68□□□□□ -0.38
LINC00598-207ENST00000616706 RAB3GAP1Q15042 981 aa12.68□□□□□ -0.38
LINC00598-207ENST00000616706 RIC3Q7Z5B4 369 aa12.68□□□□□ -0.38
LINC00598-207ENST00000616706 TNPO1Q92973 898 aaKnown RBP12.68□□□□□ -0.38
LINC00598-207ENST00000616706 MAP3K2Q9Y2U5 619 aa12.68□□□□□ -0.38
LINC00598-207ENST00000616706 AOX1Q06278 1338 aa12.68□□□□□ -0.38
LINC00598-207ENST00000616706 DDX58O95786 925 aaKnown RBP12.68□□□□□ -0.38
LINC00598-207ENST00000616706 HSP90AA1P07900 732 aaKnown RBP12.68□□□□□ -0.38
LINC00598-207ENST00000616706 KSR2Q6VAB6 950 aa12.68□□□□□ -0.38
LINC00598-207ENST00000616706 BCL11BQ9C0K0 894 aaPredicted RBP12.68□□□□□ -0.38
LINC00598-207ENST00000616706 UBR2Q8IWV8 1755 aa12.68□□□□□ -0.38
LINC00598-207ENST00000616706 RAB11FIP3O75154 756 aa12.67□□□□□ -0.38
LINC00598-207ENST00000616706 SURF6O75683 361 aaKnown RBP12.67□□□□□ -0.38
LINC00598-207ENST00000616706 ITPK1Q13572 414 aa12.67□□□□□ -0.38
LINC00598-207ENST00000616706 LRP10Q7Z4F1 713 aa12.67□□□□□ -0.38
LINC00598-207ENST00000616706 RHPN1Q8TCX5 695 aa12.67□□□□□ -0.38
LINC00598-207ENST00000616706 ESYT1Q9BSJ8 1104 aa12.67□□□□□ -0.38
LINC00598-207ENST00000616706 ERBB4Q15303 1308 aa12.67□□□□□ -0.38
LINC00598-207ENST00000616706 ANKRD13DQ6ZTN6 518 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms