RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 ARHGEF40Q8TER5 1519 aa15.69■□□□□ 0.1
PPP4R3B-206ENST00000616407 VWDEQ8N2E2 1590 aa15.69■□□□□ 0.1
PPP4R3B-206ENST00000616407 GSPT1P15170 499 aaKnown RBP15.68■□□□□ 0.1
PPP4R3B-206ENST00000616407 KRT85P78386 507 aa15.68■□□□□ 0.1
PPP4R3B-206ENST00000616407 KIF24Q5T7B8 1368 aa15.68■□□□□ 0.1
PPP4R3B-206ENST00000616407 G3V3G9 751 aa15.68■□□□□ 0.1
PPP4R3B-206ENST00000616407 DCAF8Q5TAQ9 597 aa15.68■□□□□ 0.1
PPP4R3B-206ENST00000616407 DDX11Q96FC9 970 aa15.68■□□□□ 0.1
PPP4R3B-206ENST00000616407 SIRT2Q8IXJ6 389 aa15.68■□□□□ 0.1
PPP4R3B-206ENST00000616407 GDPD2Q9HCC8 539 aa15.68■□□□□ 0.1
PPP4R3B-206ENST00000616407 IDH1O75874 414 aaKnown RBP15.68■□□□□ 0.1
PPP4R3B-206ENST00000616407 RRP12Q5JTH9 1297 aaKnown RBP15.68■□□□□ 0.1
PPP4R3B-206ENST00000616407 FAM43AQ8N2R8 423 aa15.68■□□□□ 0.1
PPP4R3B-206ENST00000616407 SYCE3A1L190 88 aa15.67■□□□□ 0.1
PPP4R3B-206ENST00000616407 GOLIM4O00461 696 aa15.67■□□□□ 0.1
PPP4R3B-206ENST00000616407 MEX3CQ5U5Q3 659 aaKnown RBP15.67■□□□□ 0.1
PPP4R3B-206ENST00000616407 BICC1Q9H694 974 aaKnown RBP15.67■□□□□ 0.1
PPP4R3B-206ENST00000616407 ADGRB1O14514 1584 aa15.67■□□□□ 0.1
PPP4R3B-206ENST00000616407 TRMT112Q9UI30 125 aaKnown RBP15.67■□□□□ 0.1
PPP4R3B-206ENST00000616407 AKAP2Q9Y2D5 859 aa15.67■□□□□ 0.1
PPP4R3B-206ENST00000616407 SNRKQ9NRH2 765 aa15.67■□□□□ 0.1
PPP4R3B-206ENST00000616407 ANAPC15P60006 121 aa15.66■□□□□ 0.1
PPP4R3B-206ENST00000616407 KIAA1210Q9ULL0 1709 aa15.66■□□□□ 0.1
PPP4R3B-206ENST00000616407 DDX46Q7L014 1031 aaKnown RBP15.66■□□□□ 0.1
PPP4R3B-206ENST00000616407 ZGPATQ8N5A5 531 aaKnown RBP15.66■□□□□ 0.1
PPP4R3B-206ENST00000616407 RASSF8Q8NHQ8 419 aa15.66■□□□□ 0.1
PPP4R3B-206ENST00000616407 STK11IPQ8N1F8 1099 aa15.66■□□□□ 0.1
PPP4R3B-206ENST00000616407 SH2B1Q9NRF2 756 aaPredicted RBP15.66■□□□□ 0.1
PPP4R3B-206ENST00000616407 CCDC173Q0VFZ6 552 aa15.66■□□□□ 0.1
PPP4R3B-206ENST00000616407 CTNNA3Q9UI47 895 aa15.66■□□□□ 0.1
PPP4R3B-206ENST00000616407 LETM1O95202 739 aaPredicted RBP15.65■□□□□ 0.1
PPP4R3B-206ENST00000616407 IL2RBP14784 551 aa15.65■□□□□ 0.1
PPP4R3B-206ENST00000616407 SDF4Q9BRK5 362 aa15.65■□□□□ 0.1
PPP4R3B-206ENST00000616407 PIK3C2BO00750 1634 aa15.65■□□□□ 0.1
PPP4R3B-206ENST00000616407 TULP1O00294 542 aaPredicted RBP15.65■□□□□ 0.1
PPP4R3B-206ENST00000616407 DHX16O60231 1041 aaKnown RBP15.65■□□□□ 0.1
PPP4R3B-206ENST00000616407 ZNF496Q96IT1 587 aaPredicted RBP15.65■□□□□ 0.1
PPP4R3B-206ENST00000616407 TCEANC2Q96MN5 208 aa15.65■□□□□ 0.1
PPP4R3B-206ENST00000616407 TTC41PQ6P2S7 1318 aa15.65■□□□□ 0.1
PPP4R3B-206ENST00000616407 GIGYF1O75420 1035 aaPredicted RBP15.64■□□□□ 0.09
PPP4R3B-206ENST00000616407 TEX13AQ9BXU3 409 aaPredicted RBP15.64■□□□□ 0.09
PPP4R3B-206ENST00000616407 MED14O60244 1454 aa15.64■□□□□ 0.09
PPP4R3B-206ENST00000616407 RAB3GAP1Q15042 981 aa15.64■□□□□ 0.09
PPP4R3B-206ENST00000616407 ZSCAN25Q6NSZ9 544 aa15.64■□□□□ 0.09
PPP4R3B-206ENST00000616407 ARHGEF25Q86VW2 580 aa15.64■□□□□ 0.09
PPP4R3B-206ENST00000616407 KLHDC4Q8TBB5 520 aa15.64■□□□□ 0.09
PPP4R3B-206ENST00000616407 ARID3AQ99856 593 aa15.64■□□□□ 0.09
PPP4R3B-206ENST00000616407 SLC52A2Q9HAB3 445 aa15.64■□□□□ 0.09
PPP4R3B-206ENST00000616407 LDHAL6AQ6ZMR3 332 aa15.64■□□□□ 0.09
PPP4R3B-206ENST00000616407 BICDL1Q6ZP65 573 aa15.64■□□□□ 0.09
PPP4R3B-206ENST00000616407 MPNDQ8N594 471 aa15.64■□□□□ 0.09
PPP4R3B-206ENST00000616407 U3KPZ7 1027 aaPredicted RBP15.64■□□□□ 0.09
PPP4R3B-206ENST00000616407 DEPDC5O75140 1603 aa15.64■□□□□ 0.09
PPP4R3B-206ENST00000616407 KAT6BQ8WYB5 2073 aa15.64■□□□□ 0.09
PPP4R3B-206ENST00000616407 SAFBQ15424 915 aaKnown RBP eCLIP15.64■□□□□ 0.09
PPP4R3B-206ENST00000616407 NOL10Q9BSC4 688 aaKnown RBP15.64■□□□□ 0.09
PPP4R3B-206ENST00000616407 RBM8AQ9Y5S9 174 aaKnown RBP15.64■□□□□ 0.09
PPP4R3B-206ENST00000616407 CPSF1Q10570 1443 aaKnown RBP15.63■□□□□ 0.09
PPP4R3B-206ENST00000616407 FRMPD1Q5SYB0 1578 aa15.63■□□□□ 0.09
PPP4R3B-206ENST00000616407 SPATA32Q96LK8 384 aa15.63■□□□□ 0.09
PPP4R3B-206ENST00000616407 HSP90AB3PQ58FF7 597 aa15.62■□□□□ 0.09
PPP4R3B-206ENST00000616407 CREBRFQ8IUR6 639 aa15.62■□□□□ 0.09
PPP4R3B-206ENST00000616407 SART3Q15020 963 aaKnown RBP15.62■□□□□ 0.09
PPP4R3B-206ENST00000616407 IMMTQ16891 758 aaKnown RBP15.62■□□□□ 0.09
PPP4R3B-206ENST00000616407 STX6O43752 255 aa15.62■□□□□ 0.09
PPP4R3B-206ENST00000616407 GJB2P29033 226 aa15.62■□□□□ 0.09
PPP4R3B-206ENST00000616407 KLHL40Q2TBA0 621 aa15.62■□□□□ 0.09
PPP4R3B-206ENST00000616407 NECAB1Q8N987 351 aa15.61■□□□□ 0.09
PPP4R3B-206ENST00000616407 SUCLG2Q96I99 432 aa15.61■□□□□ 0.09
PPP4R3B-206ENST00000616407 NMIQ13287 307 aaPredicted RBP15.61■□□□□ 0.09
PPP4R3B-206ENST00000616407 ANKRD18BA2A2Z9 1011 aa15.61■□□□□ 0.09
PPP4R3B-206ENST00000616407 KINO60870 393 aaKnown RBP15.61■□□□□ 0.09
PPP4R3B-206ENST00000616407 ATP2B1P20020 1258 aa15.61■□□□□ 0.09
PPP4R3B-206ENST00000616407 AMOTL1Q8IY63 956 aa15.61■□□□□ 0.09
PPP4R3B-206ENST00000616407 SSH3Q8TE77 659 aa15.61■□□□□ 0.09
PPP4R3B-206ENST00000616407 CLTCQ00610 1675 aaKnown RBP15.61■□□□□ 0.09
PPP4R3B-206ENST00000616407 IGHMBP2P38935 993 aaKnown RBP15.61■□□□□ 0.09
PPP4R3B-206ENST00000616407 STK38Q15208 465 aa15.61■□□□□ 0.09
PPP4R3B-206ENST00000616407 ZNF396Q96N95 335 aaPredicted RBP15.61■□□□□ 0.09
PPP4R3B-206ENST00000616407 METTL22Q9BUU2 404 aaPredicted RBP15.61■□□□□ 0.09
PPP4R3B-206ENST00000616407 GNL3LQ9NVN8 582 aaKnown RBP15.61■□□□□ 0.09
PPP4R3B-206ENST00000616407 RBM27Q9P2N5 1060 aaKnown RBP15.61■□□□□ 0.09
PPP4R3B-206ENST00000616407 TFCP2Q12800 502 aa15.6■□□□□ 0.09
PPP4R3B-206ENST00000616407 CCDC39Q9UFE4 941 aa15.6■□□□□ 0.09
PPP4R3B-206ENST00000616407 LRRC7Q96NW7 1537 aa15.6■□□□□ 0.09
PPP4R3B-206ENST00000616407 ME1P48163 572 aa15.6■□□□□ 0.09
PPP4R3B-206ENST00000616407 NACAP1Q9BZK3 213 aa15.6■□□□□ 0.09
PPP4R3B-206ENST00000616407 MROH2AA6NES4 1674 aa15.59■□□□□ 0.09
PPP4R3B-206ENST00000616407 BEND3Q5T5X7 828 aa15.59■□□□□ 0.09
PPP4R3B-206ENST00000616407 AIDAQ96BJ3 306 aa15.59■□□□□ 0.09
PPP4R3B-206ENST00000616407 TNMDQ9H2S6 317 aa15.59■□□□□ 0.09
PPP4R3B-206ENST00000616407 LRP2BPQ9P2M1 347 aa15.59■□□□□ 0.09
PPP4R3B-206ENST00000616407 USP16Q9Y5T5 823 aa15.59■□□□□ 0.09
PPP4R3B-206ENST00000616407 NEK1Q96PY6 1258 aa15.59■□□□□ 0.09
PPP4R3B-206ENST00000616407 ABCF2Q9UG63 623 aa15.59■□□□□ 0.09
PPP4R3B-206ENST00000616407 ESPNB1AK53 854 aa15.59■□□□□ 0.09
PPP4R3B-206ENST00000616407 CCDC192P0DO97 292 aa15.59■□□□□ 0.09
PPP4R3B-206ENST00000616407 A1BGP04217 495 aa15.59■□□□□ 0.09
PPP4R3B-206ENST00000616407 CPA1P15085 419 aa15.59■□□□□ 0.09
PPP4R3B-206ENST00000616407 MROH1Q8NDA8 1641 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms